RNA–Protein interactions for RNA: ENST00000433888.5

PTPN4-205, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 3

Gene PTPN4, Length 954 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-205ENST00000433888 FZD7O75084 574 aa6.16□□□□□ -1.42
PTPN4-205ENST00000433888 LRRC47Q8N1G4 583 aaKnown RBP6.16□□□□□ -1.42
PTPN4-205ENST00000433888 ZNF428Q96B54 188 aa6.16□□□□□ -1.42
PTPN4-205ENST00000433888 SLC39A2Q9NP94 309 aa6.16□□□□□ -1.42
PTPN4-205ENST00000433888 MSRB2Q9Y3D2 182 aa6.16□□□□□ -1.42
PTPN4-205ENST00000433888 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP6.15□□□□□ -1.42
PTPN4-205ENST00000433888 ADCY3O60266 1144 aa6.15□□□□□ -1.42
PTPN4-205ENST00000433888 AMY2AP04746 511 aa6.15□□□□□ -1.42
PTPN4-205ENST00000433888 AMY2BP19961 511 aa6.15□□□□□ -1.42
PTPN4-205ENST00000433888 TOP3AQ13472 1001 aaPredicted RBP6.15□□□□□ -1.42
PTPN4-205ENST00000433888 USP10Q14694 798 aaKnown RBP6.15□□□□□ -1.42
PTPN4-205ENST00000433888 ZFPM1Q8IX07 1006 aa6.15□□□□□ -1.42
PTPN4-205ENST00000433888 NEIL1Q96FI4 390 aaPredicted RBP6.15□□□□□ -1.42
PTPN4-205ENST00000433888 SPATA9Q9BWV2 254 aa6.15□□□□□ -1.42
PTPN4-205ENST00000433888 SRPK3Q9UPE1 567 aa6.15□□□□□ -1.42
PTPN4-205ENST00000433888 ZFR2Q9UPR6 939 aaKnown RBP6.15□□□□□ -1.42
PTPN4-205ENST00000433888 PLSCR1O15162 318 aa6.14□□□□□ -1.43
PTPN4-205ENST00000433888 SUV39H1O43463 412 aa6.14□□□□□ -1.43
PTPN4-205ENST00000433888 C6orf222P0C671 652 aaPredicted RBP6.14□□□□□ -1.43
PTPN4-205ENST00000433888 POLD1P28340 1107 aa6.14□□□□□ -1.43
PTPN4-205ENST00000433888 HMGA2P52926 109 aa6.14□□□□□ -1.43
PTPN4-205ENST00000433888 BTBD8Q5XKL5 378 aa6.14□□□□□ -1.43
PTPN4-205ENST00000433888 SPATC1Q76KD6 591 aa6.14□□□□□ -1.43
PTPN4-205ENST00000433888 DPH6Q7L8W6 267 aa6.14□□□□□ -1.43
PTPN4-205ENST00000433888 TAX1BP1Q86VP1 789 aa6.14□□□□□ -1.43
PTPN4-205ENST00000433888 LRRC37BQ96QE4 947 aa6.14□□□□□ -1.43
PTPN4-205ENST00000433888 ALG1Q9BT22 464 aa6.14□□□□□ -1.43
PTPN4-205ENST00000433888 MRIQ9BWK5 157 aa6.14□□□□□ -1.43
PTPN4-205ENST00000433888 CARD11Q9BXL7 1154 aa6.14□□□□□ -1.43
PTPN4-205ENST00000433888 PCED1AQ9H1Q7 454 aa6.14□□□□□ -1.43
PTPN4-205ENST00000433888 IGSF5Q9NSI5 407 aa6.14□□□□□ -1.43
PTPN4-205ENST00000433888 MAN2B1O00754 1011 aa6.13□□□□□ -1.43
PTPN4-205ENST00000433888 PTPN1P18031 435 aaKnown RBP6.13□□□□□ -1.43
PTPN4-205ENST00000433888 PAK1Q13153 545 aa6.13□□□□□ -1.43
PTPN4-205ENST00000433888 GPR19Q15760 415 aa6.13□□□□□ -1.43
PTPN4-205ENST00000433888 FOXB2Q5VYV0 432 aa6.13□□□□□ -1.43
PTPN4-205ENST00000433888 ARHGAP36Q6ZRI8 547 aa6.13□□□□□ -1.43
PTPN4-205ENST00000433888 Q6ZSN1 163 aa6.13□□□□□ -1.43
PTPN4-205ENST00000433888 SCUBE1Q8IWY4 988 aa6.13□□□□□ -1.43
PTPN4-205ENST00000433888 FUKQ8N0W3 1084 aa6.13□□□□□ -1.43
PTPN4-205ENST00000433888 NLGN4XQ8N0W4 816 aa6.13□□□□□ -1.43
PTPN4-205ENST00000433888 PCDH19Q8TAB3 1148 aa6.13□□□□□ -1.43
PTPN4-205ENST00000433888 ESYT3A0FGR9 886 aa6.12□□□□□ -1.43
PTPN4-205ENST00000433888 CUTAO60888 179 aa6.12□□□□□ -1.43
PTPN4-205ENST00000433888 DUSP8Q13202 625 aa6.12□□□□□ -1.43
PTPN4-205ENST00000433888 RNF151Q2KHN1 245 aa6.12□□□□□ -1.43
PTPN4-205ENST00000433888 AGBL4Q5VU57 503 aa6.12□□□□□ -1.43
PTPN4-205ENST00000433888 C16orf59Q7L2K0 433 aa6.12□□□□□ -1.43
PTPN4-205ENST00000433888 MAMDC2Q7Z304 686 aaPredicted RBP6.12□□□□□ -1.43
PTPN4-205ENST00000433888 GIMAP8Q8ND71 665 aaPredicted RBP6.12□□□□□ -1.43
PTPN4-205ENST00000433888 EDAQ92838 391 aa6.12□□□□□ -1.43
PTPN4-205ENST00000433888 PTPRN2Q92932 1015 aa6.12□□□□□ -1.43
PTPN4-205ENST00000433888 CBLCQ9ULV8 474 aa6.12□□□□□ -1.43
PTPN4-205ENST00000433888 ARVCFO00192 962 aa6.11□□□□□ -1.43
PTPN4-205ENST00000433888 MATN2O00339 956 aa6.11□□□□□ -1.43
PTPN4-205ENST00000433888 AQP7O14520 342 aa6.11□□□□□ -1.43
PTPN4-205ENST00000433888 FOXE3Q13461 319 aa6.11□□□□□ -1.43
PTPN4-205ENST00000433888 PRKD1Q15139 912 aaPredicted RBP6.11□□□□□ -1.43
PTPN4-205ENST00000433888 FAM209AQ5JX71 171 aa6.11□□□□□ -1.43
PTPN4-205ENST00000433888 MIIPQ5JXC2 388 aa6.11□□□□□ -1.43
PTPN4-205ENST00000433888 DPP8Q6V1X1 898 aaPredicted RBP6.11□□□□□ -1.43
PTPN4-205ENST00000433888 OSTM1Q86WC4 334 aa6.11□□□□□ -1.43
PTPN4-205ENST00000433888 IFNL2Q8IZJ0 200 aa6.11□□□□□ -1.43
PTPN4-205ENST00000433888 ZDHHC5Q9C0B5 715 aa6.11□□□□□ -1.43
PTPN4-205ENST00000433888 PCDHA8Q9Y5H6 950 aa6.11□□□□□ -1.43
PTPN4-205ENST00000433888 HS3ST3A1Q9Y663 406 aa6.11□□□□□ -1.43
PTPN4-205ENST00000433888 ZNF561-AS1K7EIQ3 104 aa6.1□□□□□ -1.43
PTPN4-205ENST00000433888 C4BPAP04003 597 aaKnown RBP6.1□□□□□ -1.43
PTPN4-205ENST00000433888 PYGMP11217 842 aa6.1□□□□□ -1.43
PTPN4-205ENST00000433888 JAM2P57087 298 aa6.1□□□□□ -1.43
PTPN4-205ENST00000433888 RAC3P60763 192 aa6.1□□□□□ -1.43
PTPN4-205ENST00000433888 RASGRF1Q13972 1273 aa6.1□□□□□ -1.43
PTPN4-205ENST00000433888 NOLC1Q14978 699 aaKnown RBP eCLIP6.1□□□□□ -1.43
PTPN4-205ENST00000433888 STILQ15468 1287 aa6.1□□□□□ -1.43
PTPN4-205ENST00000433888 TBR1Q16650 682 aa6.1□□□□□ -1.43
PTPN4-205ENST00000433888 HS1BP3Q53T59 392 aa6.1□□□□□ -1.43
PTPN4-205ENST00000433888 PTRH1Q86Y79 214 aaKnown RBP6.1□□□□□ -1.43
PTPN4-205ENST00000433888 ZBTB38Q8NAP3 1195 aaPredicted RBP6.1□□□□□ -1.43
PTPN4-205ENST00000433888 FBXW5Q969U6 566 aa6.1□□□□□ -1.43
PTPN4-205ENST00000433888 ZNF503Q96F45 646 aa6.1□□□□□ -1.43
PTPN4-205ENST00000433888 ADOQ96SZ5 270 aa6.1□□□□□ -1.43
PTPN4-205ENST00000433888 RIC8BQ9NVN3 520 aa6.1□□□□□ -1.43
PTPN4-205ENST00000433888 BTBD7Q9P203 1132 aa6.1□□□□□ -1.43
PTPN4-205ENST00000433888 TRBV23-1A0A0A0MS06 115 aa6.09□□□□□ -1.43
PTPN4-205ENST00000433888 PDPK1O15530 556 aa6.09□□□□□ -1.43
PTPN4-205ENST00000433888 RAD17O75943 681 aa6.09□□□□□ -1.43
PTPN4-205ENST00000433888 PDE6AP16499 860 aa6.09□□□□□ -1.43
PTPN4-205ENST00000433888 CR2P20023 1033 aa6.09□□□□□ -1.43
PTPN4-205ENST00000433888 AOAHP28039 575 aa6.09□□□□□ -1.43
PTPN4-205ENST00000433888 ETV4P43268 484 aa6.09□□□□□ -1.43
PTPN4-205ENST00000433888 IL13RA1P78552 427 aa6.09□□□□□ -1.43
PTPN4-205ENST00000433888 LACTBP83111 547 aaPredicted RBP6.09□□□□□ -1.43
PTPN4-205ENST00000433888 KLF10Q13118 480 aa6.09□□□□□ -1.43
PTPN4-205ENST00000433888 NFYCQ13952 458 aa6.09□□□□□ -1.43
PTPN4-205ENST00000433888 ZMAT1Q5H9K5 638 aa6.09□□□□□ -1.43
PTPN4-205ENST00000433888 FIGNQ5HY92 759 aa6.09□□□□□ -1.43
PTPN4-205ENST00000433888 RNF207Q6ZRF8 634 aa6.09□□□□□ -1.43
PTPN4-205ENST00000433888 LARP4Q71RC2 724 aaKnown RBP eCLIP6.09□□□□□ -1.43
PTPN4-205ENST00000433888 CXXC5Q7LFL8 322 aaKnown RBP6.09□□□□□ -1.43
PTPN4-205ENST00000433888 WNK4Q96J92 1243 aa6.09□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms