RNA–Protein interactions for RNA: ENST00000433680.1

TNFAIP3-204, Transcript of TNF alpha induced protein 3, humanhuman

TSL 3

Gene TNFAIP3, Length 465 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-204ENST00000433680 PTGDRQ13258 359 aa16.57■□□□□ 0.24
TNFAIP3-204ENST00000433680 NBR1Q14596 966 aa16.57■□□□□ 0.24
TNFAIP3-204ENST00000433680 TMEM266Q2M3C6 531 aa16.57■□□□□ 0.24
TNFAIP3-204ENST00000433680 TRIM60Q495X7 471 aa16.57■□□□□ 0.24
TNFAIP3-204ENST00000433680 FAM47CQ5HY64 1035 aa16.57■□□□□ 0.24
TNFAIP3-204ENST00000433680 SWSAP1Q6NVH7 229 aa16.57■□□□□ 0.24
TNFAIP3-204ENST00000433680 TRIM50Q86XT4 487 aa16.57■□□□□ 0.24
TNFAIP3-204ENST00000433680 PCYT2Q99447 389 aa16.57■□□□□ 0.24
TNFAIP3-204ENST00000433680 TMEM60Q9H2L4 133 aa16.57■□□□□ 0.24
TNFAIP3-204ENST00000433680 MAFBQ9Y5Q3 323 aaPredicted RBP16.57■□□□□ 0.24
TNFAIP3-204ENST00000433680 MKI67P46013 3256 aaKnown RBP16.57■□□□□ 0.24
TNFAIP3-204ENST00000433680 GNAT1P11488 350 aa16.56■□□□□ 0.24
TNFAIP3-204ENST00000433680 CHMP4BP1P59074 171 aa16.56■□□□□ 0.24
TNFAIP3-204ENST00000433680 TLE2Q04725 743 aa16.56■□□□□ 0.24
TNFAIP3-204ENST00000433680 SPIRE1Q08AE8 756 aa16.56■□□□□ 0.24
TNFAIP3-204ENST00000433680 PDIA5Q14554 519 aa16.56■□□□□ 0.24
TNFAIP3-204ENST00000433680 EPHA7Q15375 998 aa16.56■□□□□ 0.24
TNFAIP3-204ENST00000433680 PDXDC2PQ6P474 469 aa16.56■□□□□ 0.24
TNFAIP3-204ENST00000433680 CCDC60Q8IWA6 550 aaPredicted RBP16.56■□□□□ 0.24
TNFAIP3-204ENST00000433680 FAM126BQ8IXS8 530 aa16.56■□□□□ 0.24
TNFAIP3-204ENST00000433680 ATP6V0A1Q93050 837 aa16.56■□□□□ 0.24
TNFAIP3-204ENST00000433680 RAB34Q9BZG1 259 aa16.56■□□□□ 0.24
TNFAIP3-204ENST00000433680 GABBR1Q9UBS5 961 aa16.56■□□□□ 0.24
TNFAIP3-204ENST00000433680 GTF2IRD1Q9UHL9 959 aa16.56■□□□□ 0.24
TNFAIP3-204ENST00000433680 NR2E3Q9Y5X4 410 aa16.56■□□□□ 0.24
TNFAIP3-204ENST00000433680 STK24Q9Y6E0 443 aa16.56■□□□□ 0.24
TNFAIP3-204ENST00000433680 WDR81Q562E7 1941 aa16.56■□□□□ 0.24
TNFAIP3-204ENST00000433680 MYH15Q9Y2K3 1946 aa16.56■□□□□ 0.24
TNFAIP3-204ENST00000433680 MYH9P35579 1960 aaKnown RBP16.55■□□□□ 0.24
TNFAIP3-204ENST00000433680 NRCAMQ92823 1304 aa16.55■□□□□ 0.24
TNFAIP3-204ENST00000433680 IGSF9BQ9UPX0 1349 aa16.55■□□□□ 0.24
TNFAIP3-204ENST00000433680 PQBP1O60828 265 aaKnown RBP16.55■□□□□ 0.24
TNFAIP3-204ENST00000433680 F13A1P00488 732 aa16.55■□□□□ 0.24
TNFAIP3-204ENST00000433680 CD4P01730 458 aa16.55■□□□□ 0.24
TNFAIP3-204ENST00000433680 FXR2P51116 673 aaKnown RBP eCLIP16.55■□□□□ 0.24
TNFAIP3-204ENST00000433680 ATP2C1P98194 919 aaPredicted RBP16.55■□□□□ 0.24
TNFAIP3-204ENST00000433680 ARL6IP4Q66PJ3 421 aaKnown RBP16.55■□□□□ 0.24
TNFAIP3-204ENST00000433680 NCAPH2Q6IBW4 605 aa16.55■□□□□ 0.24
TNFAIP3-204ENST00000433680 NEK9Q8TD19 979 aa16.55■□□□□ 0.24
TNFAIP3-204ENST00000433680 FAM167AQ96KS9 214 aa16.55■□□□□ 0.24
TNFAIP3-204ENST00000433680 RNPEPQ9H4A4 650 aa16.55■□□□□ 0.24
TNFAIP3-204ENST00000433680 HDAC6Q9UBN7 1215 aa16.55■□□□□ 0.24
TNFAIP3-204ENST00000433680 POTEB3A0JP26 581 aa16.54■□□□□ 0.24
TNFAIP3-204ENST00000433680 C17orf102A2RUQ5 167 aa16.54■□□□□ 0.24
TNFAIP3-204ENST00000433680 RRN3P2A6NIE6 340 aa16.54■□□□□ 0.24
TNFAIP3-204ENST00000433680 HBP1O60381 514 aa16.54■□□□□ 0.24
TNFAIP3-204ENST00000433680 P4HBP07237 508 aaKnown RBP16.54■□□□□ 0.24
TNFAIP3-204ENST00000433680 CLTBP09497 229 aa16.54■□□□□ 0.24
TNFAIP3-204ENST00000433680 SMIM10L2AP0DMW4 78 aa16.54■□□□□ 0.24
TNFAIP3-204ENST00000433680 SMIM10L2BP0DMW5 78 aa16.54■□□□□ 0.24
TNFAIP3-204ENST00000433680 HOXC8P31273 242 aa16.54■□□□□ 0.24
TNFAIP3-204ENST00000433680 FAAP100Q0VG06 881 aa16.54■□□□□ 0.24
TNFAIP3-204ENST00000433680 PLCB4Q15147 1175 aa16.54■□□□□ 0.24
TNFAIP3-204ENST00000433680 ATL3Q6DD88 541 aa16.54■□□□□ 0.24
TNFAIP3-204ENST00000433680 POTEBQ6S5H4 581 aa16.54■□□□□ 0.24
TNFAIP3-204ENST00000433680 DTHD1Q6ZMT9 781 aa16.54■□□□□ 0.24
TNFAIP3-204ENST00000433680 CKAP2LQ8IYA6 745 aa16.54■□□□□ 0.24
TNFAIP3-204ENST00000433680 ATP8B4Q8TF62 1192 aa16.54■□□□□ 0.24
TNFAIP3-204ENST00000433680 BBXQ8WY36 941 aaPredicted RBP16.54■□□□□ 0.24
TNFAIP3-204ENST00000433680 ZNF396Q96N95 335 aaPredicted RBP16.54■□□□□ 0.24
TNFAIP3-204ENST00000433680 NRBP2Q9NSY0 501 aa16.54■□□□□ 0.24
TNFAIP3-204ENST00000433680 TNRC18O15417 2968 aaPredicted RBP16.53■□□□□ 0.24
TNFAIP3-204ENST00000433680 COL1A2P08123 1366 aa16.53■□□□□ 0.24
TNFAIP3-204ENST00000433680 EML1O00423 815 aa16.53■□□□□ 0.24
TNFAIP3-204ENST00000433680 B4GALT4O60513 344 aa16.53■□□□□ 0.24
TNFAIP3-204ENST00000433680 BRD1O95696 1058 aa16.53■□□□□ 0.24
TNFAIP3-204ENST00000433680 MARK3P27448 753 aa16.53■□□□□ 0.24
TNFAIP3-204ENST00000433680 TECP42680 631 aa16.53■□□□□ 0.24
TNFAIP3-204ENST00000433680 QARSP47897 775 aaKnown RBP16.53■□□□□ 0.24
TNFAIP3-204ENST00000433680 PSMC5P62195 406 aa16.53■□□□□ 0.24
TNFAIP3-204ENST00000433680 SF3A1Q15459 793 aaKnown RBP16.53■□□□□ 0.24
TNFAIP3-204ENST00000433680 PTGISQ16647 500 aa16.53■□□□□ 0.24
TNFAIP3-204ENST00000433680 GDF6Q6KF10 455 aaPredicted RBP16.53■□□□□ 0.24
TNFAIP3-204ENST00000433680 C7orf61Q8IZ16 206 aa16.53■□□□□ 0.24
TNFAIP3-204ENST00000433680 ERMNQ8TAM6 284 aa16.53■□□□□ 0.24
TNFAIP3-204ENST00000433680 PRKAG2Q9UGJ0 569 aa16.53■□□□□ 0.24
TNFAIP3-204ENST00000433680 TRPC6Q9Y210 931 aa16.53■□□□□ 0.24
TNFAIP3-204ENST00000433680 NOD1Q9Y239 953 aa16.53■□□□□ 0.24
TNFAIP3-204ENST00000433680 MORC2Q9Y6X9 1032 aaPredicted RBP16.53■□□□□ 0.24
TNFAIP3-204ENST00000433680 ATP4AP20648 1035 aa16.52■□□□□ 0.24
TNFAIP3-204ENST00000433680 NUCB2P80303 420 aa16.52■□□□□ 0.24
TNFAIP3-204ENST00000433680 PPFIA1Q13136 1202 aa16.52■□□□□ 0.24
TNFAIP3-204ENST00000433680 PKP1Q13835 747 aa16.52■□□□□ 0.24
TNFAIP3-204ENST00000433680 XKR3Q5GH77 459 aa16.52■□□□□ 0.24
TNFAIP3-204ENST00000433680 ZNF484Q5JVG2 852 aa16.52■□□□□ 0.24
TNFAIP3-204ENST00000433680 IGSF22Q8N9C0 903 aa16.52■□□□□ 0.24
TNFAIP3-204ENST00000433680 EIF2AK1Q9BQI3 630 aaKnown RBP16.52■□□□□ 0.24
TNFAIP3-204ENST00000433680 TRPV6Q9H1D0 765 aa16.52■□□□□ 0.24
TNFAIP3-204ENST00000433680 PDLIM7Q9NR12 457 aa16.52■□□□□ 0.24
TNFAIP3-204ENST00000433680 TMEM39AQ9NV64 488 aa16.52■□□□□ 0.24
TNFAIP3-204ENST00000433680 SETD4Q9NVD3 440 aa16.52■□□□□ 0.24
TNFAIP3-204ENST00000433680 LRWD1Q9UFC0 647 aa16.52■□□□□ 0.24
TNFAIP3-204ENST00000433680 ATP6V1DQ9Y5K8 247 aa16.52■□□□□ 0.24
TNFAIP3-204ENST00000433680 KAT6AQ92794 2004 aa16.52■□□□□ 0.23
TNFAIP3-204ENST00000433680 POTEMA6NI47 508 aa16.51■□□□□ 0.23
TNFAIP3-204ENST00000433680 KIAA0355O15063 1070 aa16.51■□□□□ 0.23
TNFAIP3-204ENST00000433680 ZNF862O60290 1169 aa16.51■□□□□ 0.23
TNFAIP3-204ENST00000433680 SLITRK3O94933 977 aa16.51■□□□□ 0.23
TNFAIP3-204ENST00000433680 OATP04181 439 aa16.51■□□□□ 0.23
TNFAIP3-204ENST00000433680 RPLP2P05387 115 aaKnown RBP16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms