RNA–Protein interactions for RNA: ENST00000433297.2

HMGCS1-202, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HMGCS1, Length 3,466 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-202ENST00000433297 THEMIS2Q5TEJ8 643 aa12.59□□□□□ -0.39
HMGCS1-202ENST00000433297 HOOK3Q86VS8 718 aa12.59□□□□□ -0.39
HMGCS1-202ENST00000433297 SPDYE1Q8NFV5 336 aaPredicted RBP12.59□□□□□ -0.39
HMGCS1-202ENST00000433297 DDX12PQ92771 950 aa12.59□□□□□ -0.39
HMGCS1-202ENST00000433297 RIOK1Q9BRS2 568 aaKnown RBP12.59□□□□□ -0.39
HMGCS1-202ENST00000433297 SNX24Q9Y343 169 aa12.59□□□□□ -0.39
HMGCS1-202ENST00000433297 PCDH11XQ9BZA7 1347 aa12.59□□□□□ -0.39
HMGCS1-202ENST00000433297 PCDH11YQ9BZA8 1340 aa12.59□□□□□ -0.39
HMGCS1-202ENST00000433297 TJP1Q07157 1748 aa12.59□□□□□ -0.39
HMGCS1-202ENST00000433297 RBAK-RBAKDNI3L0D1 243 aa12.59□□□□□ -0.39
HMGCS1-202ENST00000433297 SOGA3Q5TF21 947 aa12.59□□□□□ -0.39
HMGCS1-202ENST00000433297 UNC13DQ70J99 1090 aa12.59□□□□□ -0.39
HMGCS1-202ENST00000433297 ERICH1Q86X53 443 aa12.59□□□□□ -0.39
HMGCS1-202ENST00000433297 MAB21L3Q8N8X9 362 aa12.59□□□□□ -0.39
HMGCS1-202ENST00000433297 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP12.59□□□□□ -0.39
HMGCS1-202ENST00000433297 LARP4BQ92615 738 aaKnown RBP12.59□□□□□ -0.39
HMGCS1-202ENST00000433297 GLG1Q92896 1179 aa12.59□□□□□ -0.39
HMGCS1-202ENST00000433297 BATF3Q9NR55 127 aa12.59□□□□□ -0.39
HMGCS1-202ENST00000433297 NR2E1Q9Y466 385 aa12.59□□□□□ -0.39
HMGCS1-202ENST00000433297 POTEMA6NI47 508 aa12.58□□□□□ -0.39
HMGCS1-202ENST00000433297 AP1G2O75843 785 aa12.58□□□□□ -0.39
HMGCS1-202ENST00000433297 PAEPP09466 180 aa12.58□□□□□ -0.39
HMGCS1-202ENST00000433297 GRIK3Q13003 919 aa12.58□□□□□ -0.39
HMGCS1-202ENST00000433297 DENND2CQ68D51 928 aa12.58□□□□□ -0.39
HMGCS1-202ENST00000433297 LRRC55Q6ZSA7 311 aa12.58□□□□□ -0.39
HMGCS1-202ENST00000433297 OTUD6AQ7L8S5 288 aa12.58□□□□□ -0.39
HMGCS1-202ENST00000433297 GUF1Q8N442 669 aaKnown RBP12.58□□□□□ -0.39
HMGCS1-202ENST00000433297 MYH2Q9UKX2 1941 aa12.58□□□□□ -0.4
HMGCS1-202ENST00000433297 TULP1O00294 542 aaPredicted RBP12.58□□□□□ -0.4
HMGCS1-202ENST00000433297 KIF3CO14782 793 aa12.58□□□□□ -0.4
HMGCS1-202ENST00000433297 MARCH6O60337 910 aa12.58□□□□□ -0.4
HMGCS1-202ENST00000433297 EVI5O60447 810 aa12.58□□□□□ -0.4
HMGCS1-202ENST00000433297 CLSTN1O94985 981 aa12.58□□□□□ -0.4
HMGCS1-202ENST00000433297 NQO1P15559 274 aaKnown RBP12.58□□□□□ -0.4
HMGCS1-202ENST00000433297 FKBP3Q00688 224 aaKnown RBP12.58□□□□□ -0.4
HMGCS1-202ENST00000433297 LRRC63Q05C16 580 aa12.58□□□□□ -0.4
HMGCS1-202ENST00000433297 ALKBH5Q6P6C2 394 aaKnown RBP12.58□□□□□ -0.4
HMGCS1-202ENST00000433297 MYOCDQ8IZQ8 938 aa12.58□□□□□ -0.4
HMGCS1-202ENST00000433297 AK8Q96MA6 479 aa12.58□□□□□ -0.4
HMGCS1-202ENST00000433297 MMTAG2Q9BU76 263 aaKnown RBP12.58□□□□□ -0.4
HMGCS1-202ENST00000433297 ZMYND12Q9H0C1 365 aa12.58□□□□□ -0.4
HMGCS1-202ENST00000433297 NUCKS1Q9H1E3 243 aaKnown RBP12.58□□□□□ -0.4
HMGCS1-202ENST00000433297 MAGEF1Q9HAY2 307 aa12.58□□□□□ -0.4
HMGCS1-202ENST00000433297 DBR1Q9UK59 544 aaKnown RBP12.58□□□□□ -0.4
HMGCS1-202ENST00000433297 TRIM33Q9UPN9 1127 aa12.58□□□□□ -0.4
HMGCS1-202ENST00000433297 USP17L3A6NCW0 530 aa12.58□□□□□ -0.4
HMGCS1-202ENST00000433297 USP17L4A6NCW7 530 aa12.58□□□□□ -0.4
HMGCS1-202ENST00000433297 SMCO2A6NFE2 343 aa12.58□□□□□ -0.4
HMGCS1-202ENST00000433297 KRT13P13646 458 aa12.58□□□□□ -0.4
HMGCS1-202ENST00000433297 CHRNDQ07001 517 aa12.58□□□□□ -0.4
HMGCS1-202ENST00000433297 SLC29A2Q14542 456 aa12.58□□□□□ -0.4
HMGCS1-202ENST00000433297 NONOQ15233 471 aaKnown RBP eCLIP12.58□□□□□ -0.4
HMGCS1-202ENST00000433297 USP17L1Q7RTZ2 530 aa12.58□□□□□ -0.4
HMGCS1-202ENST00000433297 ACTRT1Q8TDG2 376 aa12.58□□□□□ -0.4
HMGCS1-202ENST00000433297 TBCKQ8TEA7 893 aa12.58□□□□□ -0.4
HMGCS1-202ENST00000433297 ZNF317Q96PQ6 595 aaPredicted RBP12.58□□□□□ -0.4
HMGCS1-202ENST00000433297 MCM9Q9NXL9 1143 aa12.58□□□□□ -0.4
HMGCS1-202ENST00000433297 SLC12A4Q9UP95 1085 aa12.58□□□□□ -0.4
HMGCS1-202ENST00000433297 ZNF211Q13398 564 aaPredicted RBP12.57□□□□□ -0.4
HMGCS1-202ENST00000433297 ZNF571Q7Z3V5 609 aaPredicted RBP12.57□□□□□ -0.4
HMGCS1-202ENST00000433297 CCDC25Q86WR0 208 aa12.57□□□□□ -0.4
HMGCS1-202ENST00000433297 GJA10Q969M2 543 aa12.57□□□□□ -0.4
HMGCS1-202ENST00000433297 USP54Q70EL1 1684 aa12.57□□□□□ -0.4
HMGCS1-202ENST00000433297 PMS2P54278 862 aa12.57□□□□□ -0.4
HMGCS1-202ENST00000433297 GRB10Q13322 594 aa12.57□□□□□ -0.4
HMGCS1-202ENST00000433297 IFI16Q16666 785 aaKnown RBP12.57□□□□□ -0.4
HMGCS1-202ENST00000433297 TCERG1LQ5VWI1 586 aa12.57□□□□□ -0.4
HMGCS1-202ENST00000433297 SNX29Q8TEQ0 813 aa12.57□□□□□ -0.4
HMGCS1-202ENST00000433297 DYNLL2Q96FJ2 89 aa12.57□□□□□ -0.4
HMGCS1-202ENST00000433297 NUDT12Q9BQG2 462 aa12.57□□□□□ -0.4
HMGCS1-202ENST00000433297 MKNK2Q9HBH9 465 aa12.57□□□□□ -0.4
HMGCS1-202ENST00000433297 FAM114A2Q9NRY5 505 aa12.57□□□□□ -0.4
HMGCS1-202ENST00000433297 BLOC1S4Q9NUP1 217 aa12.57□□□□□ -0.4
HMGCS1-202ENST00000433297 TNS3Q68CZ2 1445 aa12.57□□□□□ -0.4
HMGCS1-202ENST00000433297 CCDC188H7C350 402 aa12.57□□□□□ -0.4
HMGCS1-202ENST00000433297 LAD1O00515 517 aa12.57□□□□□ -0.4
HMGCS1-202ENST00000433297 SLC9A1P19634 815 aa12.57□□□□□ -0.4
HMGCS1-202ENST00000433297 ABCB4P21439 1286 aa12.57□□□□□ -0.4
HMGCS1-202ENST00000433297 ADCY1Q08828 1119 aa12.57□□□□□ -0.4
HMGCS1-202ENST00000433297 GNPTABQ3T906 1256 aa12.57□□□□□ -0.4
HMGCS1-202ENST00000433297 CRELD2Q6UXH1 353 aaPredicted RBP12.57□□□□□ -0.4
HMGCS1-202ENST00000433297 NEK8Q86SG6 692 aa12.57□□□□□ -0.4
HMGCS1-202ENST00000433297 ANKRD42Q8N9B4 389 aa12.57□□□□□ -0.4
HMGCS1-202ENST00000433297 ZBTB1Q9Y2K1 713 aa12.57□□□□□ -0.4
HMGCS1-202ENST00000433297 CFAP73A6NFT4 308 aa12.56□□□□□ -0.4
HMGCS1-202ENST00000433297 CYTH3O43739 400 aa12.56□□□□□ -0.4
HMGCS1-202ENST00000433297 KRT16P08779 473 aa12.56□□□□□ -0.4
HMGCS1-202ENST00000433297 USP17L8P0C7I0 530 aa12.56□□□□□ -0.4
HMGCS1-202ENST00000433297 MKRN4PQ13434 485 aaPredicted RBP12.56□□□□□ -0.4
HMGCS1-202ENST00000433297 SNX1Q13596 522 aa12.56□□□□□ -0.4
HMGCS1-202ENST00000433297 TAF11Q15544 211 aa12.56□□□□□ -0.4
HMGCS1-202ENST00000433297 UBAP2Q5T6F2 1119 aaKnown RBP12.56□□□□□ -0.4
HMGCS1-202ENST00000433297 NEK9Q8TD19 979 aa12.56□□□□□ -0.4
HMGCS1-202ENST00000433297 CCHCR1Q8TD31 782 aa12.56□□□□□ -0.4
HMGCS1-202ENST00000433297 EPS8L3Q8TE67 593 aaKnown RBP12.56□□□□□ -0.4
HMGCS1-202ENST00000433297 EDEM3Q9BZQ6 932 aa12.56□□□□□ -0.4
HMGCS1-202ENST00000433297 NSRP1Q9H0G5 558 aaKnown RBP12.56□□□□□ -0.4
HMGCS1-202ENST00000433297 FGFR1OP2Q9NVK5 253 aa12.56□□□□□ -0.4
HMGCS1-202ENST00000433297 TMEM260Q9NX78 707 aa12.56□□□□□ -0.4
HMGCS1-202ENST00000433297 CCDC169A6NNP5 214 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms