RNA–Protein interactions for RNA: ENST00000431803.2

CDC42-IT1-201, CDC42 intronic transcript 1, humanhuman

TSL 1 (best) BASIC

Gene CDC42-IT1, Length 692 nt, Biotype sense intronic.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42-IT1-201ENST00000431803 SENP7Q9BQF6 1050 aa10.84□□□□□ -0.67
CDC42-IT1-201ENST00000431803 USP26Q9BXU7 913 aa10.84□□□□□ -0.67
CDC42-IT1-201ENST00000431803 TUT1Q9H6E5 874 aaKnown RBP10.84□□□□□ -0.67
CDC42-IT1-201ENST00000431803 MTCH2Q9Y6C9 303 aa10.84□□□□□ -0.67
CDC42-IT1-201ENST00000431803 EMSYQ7Z589 1322 aa10.84□□□□□ -0.67
CDC42-IT1-201ENST00000431803 C17orf102A2RUQ5 167 aa10.83□□□□□ -0.68
CDC42-IT1-201ENST00000431803 CCDC69A6NI79 296 aa10.83□□□□□ -0.68
CDC42-IT1-201ENST00000431803 RBAK-RBAKDNI3L0D1 243 aa10.83□□□□□ -0.68
CDC42-IT1-201ENST00000431803 RFXAPO00287 272 aa10.83□□□□□ -0.68
CDC42-IT1-201ENST00000431803 EFCAB14O75071 495 aa10.83□□□□□ -0.68
CDC42-IT1-201ENST00000431803 GJB5O95377 273 aa10.83□□□□□ -0.68
CDC42-IT1-201ENST00000431803 CALM1P0DP23 149 aa10.83□□□□□ -0.68
CDC42-IT1-201ENST00000431803 CALM2P0DP24 149 aa10.83□□□□□ -0.68
CDC42-IT1-201ENST00000431803 CALM3P0DP25 149 aa10.83□□□□□ -0.68
CDC42-IT1-201ENST00000431803 RXRAP19793 462 aa10.83□□□□□ -0.68
CDC42-IT1-201ENST00000431803 MRPS5P82675 430 aaKnown RBP10.83□□□□□ -0.68
CDC42-IT1-201ENST00000431803 NFXL1Q6ZNB6 911 aa10.83□□□□□ -0.68
CDC42-IT1-201ENST00000431803 TMTC3Q6ZXV5 915 aa10.83□□□□□ -0.68
CDC42-IT1-201ENST00000431803 SPRED2Q7Z698 418 aa10.83□□□□□ -0.68
CDC42-IT1-201ENST00000431803 TMCO2Q7Z6W1 182 aaPredicted RBP10.83□□□□□ -0.68
CDC42-IT1-201ENST00000431803 CMTR1Q8N1G2 835 aaKnown RBP10.83□□□□□ -0.68
CDC42-IT1-201ENST00000431803 SMARCC2Q8TAQ2 1214 aa10.83□□□□□ -0.68
CDC42-IT1-201ENST00000431803 CUL5Q93034 780 aa10.83□□□□□ -0.68
CDC42-IT1-201ENST00000431803 ATP6V0A1Q93050 837 aa10.83□□□□□ -0.68
CDC42-IT1-201ENST00000431803 CERS4Q9HA82 394 aa10.83□□□□□ -0.68
CDC42-IT1-201ENST00000431803 ANO2Q9NQ90 1003 aa10.83□□□□□ -0.68
CDC42-IT1-201ENST00000431803 RTEL1Q9NZ71 1219 aa10.83□□□□□ -0.68
CDC42-IT1-201ENST00000431803 TELO2Q9Y4R8 837 aa10.83□□□□□ -0.68
CDC42-IT1-201ENST00000431803 ADGRG1Q9Y653 693 aa10.83□□□□□ -0.68
CDC42-IT1-201ENST00000431803 SLC12A7Q9Y666 1083 aa10.83□□□□□ -0.68
CDC42-IT1-201ENST00000431803 DOCK5Q9H7D0 1870 aa10.83□□□□□ -0.68
CDC42-IT1-201ENST00000431803 COL4A4P53420 1690 aaPredicted RBP10.82□□□□□ -0.68
CDC42-IT1-201ENST00000431803 RSPH10B2B2RC85 870 aa10.82□□□□□ -0.68
CDC42-IT1-201ENST00000431803 TREHO43280 583 aa10.82□□□□□ -0.68
CDC42-IT1-201ENST00000431803 LPXNO60711 386 aa10.82□□□□□ -0.68
CDC42-IT1-201ENST00000431803 CAND2O75155 1236 aa10.82□□□□□ -0.68
CDC42-IT1-201ENST00000431803 LGR5O75473 907 aa10.82□□□□□ -0.68
CDC42-IT1-201ENST00000431803 RSPH10BP0C881 870 aa10.82□□□□□ -0.68
CDC42-IT1-201ENST00000431803 THPOP40225 353 aa10.82□□□□□ -0.68
CDC42-IT1-201ENST00000431803 ADAM17P78536 824 aa10.82□□□□□ -0.68
CDC42-IT1-201ENST00000431803 IKBKEQ14164 716 aa10.82□□□□□ -0.68
CDC42-IT1-201ENST00000431803 PLEKHG4Q58EX7 1191 aa10.82□□□□□ -0.68
CDC42-IT1-201ENST00000431803 SWT1Q5T5J6 900 aaKnown RBP10.82□□□□□ -0.68
CDC42-IT1-201ENST00000431803 TRIM50Q86XT4 487 aa10.82□□□□□ -0.68
CDC42-IT1-201ENST00000431803 FANCBQ8NB91 859 aa10.82□□□□□ -0.68
CDC42-IT1-201ENST00000431803 ARNTL2Q8WYA1 636 aa10.82□□□□□ -0.68
CDC42-IT1-201ENST00000431803 GPRASP2Q96D09 838 aa10.82□□□□□ -0.68
CDC42-IT1-201ENST00000431803 RAD9AQ99638 391 aa10.82□□□□□ -0.68
CDC42-IT1-201ENST00000431803 LRRC2Q9BYS8 371 aa10.82□□□□□ -0.68
CDC42-IT1-201ENST00000431803 RNPEPQ9H4A4 650 aa10.82□□□□□ -0.68
CDC42-IT1-201ENST00000431803 PSTPIP2Q9H939 334 aa10.82□□□□□ -0.68
CDC42-IT1-201ENST00000431803 ZNF215Q9UL58 517 aaPredicted RBP10.82□□□□□ -0.68
CDC42-IT1-201ENST00000431803 MICAL3Q7RTP6 2002 aa10.81□□□□□ -0.68
CDC42-IT1-201ENST00000431803 hCG_1642624A0A1W2PR95 340 aa10.81□□□□□ -0.68
CDC42-IT1-201ENST00000431803 TNFRSF10AO00220 468 aa10.81□□□□□ -0.68
CDC42-IT1-201ENST00000431803 KCNA2P16389 499 aa10.81□□□□□ -0.68
CDC42-IT1-201ENST00000431803 ITGB5P18084 799 aa10.81□□□□□ -0.68
CDC42-IT1-201ENST00000431803 GRB10Q13322 594 aa10.81□□□□□ -0.68
CDC42-IT1-201ENST00000431803 KRT40Q6A162 431 aa10.81□□□□□ -0.68
CDC42-IT1-201ENST00000431803 APOA5Q6Q788 366 aa10.81□□□□□ -0.68
CDC42-IT1-201ENST00000431803 NLRX1Q86UT6 975 aa10.81□□□□□ -0.68
CDC42-IT1-201ENST00000431803 MICU3Q86XE3 530 aa10.81□□□□□ -0.68
CDC42-IT1-201ENST00000431803 RAB11FIP4Q86YS3 637 aa10.81□□□□□ -0.68
CDC42-IT1-201ENST00000431803 MICALL1Q8N3F8 863 aa10.81□□□□□ -0.68
CDC42-IT1-201ENST00000431803 GIMAP8Q8ND71 665 aaPredicted RBP10.81□□□□□ -0.68
CDC42-IT1-201ENST00000431803 DBF4BQ8NFT6 615 aa10.81□□□□□ -0.68
CDC42-IT1-201ENST00000431803 ADAMTS19Q8TE59 1207 aa10.81□□□□□ -0.68
CDC42-IT1-201ENST00000431803 LMBR1Q8WVP7 490 aa10.81□□□□□ -0.68
CDC42-IT1-201ENST00000431803 CDHR1Q96JP9 859 aa10.81□□□□□ -0.68
CDC42-IT1-201ENST00000431803 SETD4Q9NVD3 440 aa10.81□□□□□ -0.68
CDC42-IT1-201ENST00000431803 COL4A6Q14031 1691 aa10.8□□□□□ -0.68
CDC42-IT1-201ENST00000431803 LINC01553A4QN01 128 aa10.8□□□□□ -0.68
CDC42-IT1-201ENST00000431803 ATP9AO75110 1047 aa10.8□□□□□ -0.68
CDC42-IT1-201ENST00000431803 GNAT1P11488 350 aa10.8□□□□□ -0.68
CDC42-IT1-201ENST00000431803 ERVK-21P61565 698 aa10.8□□□□□ -0.68
CDC42-IT1-201ENST00000431803 EXOSC10Q01780 885 aaKnown RBP10.8□□□□□ -0.68
CDC42-IT1-201ENST00000431803 TFF2Q03403 129 aa10.8□□□□□ -0.68
CDC42-IT1-201ENST00000431803 FUT2Q10981 343 aa10.8□□□□□ -0.68
CDC42-IT1-201ENST00000431803 UBE2SQ16763 222 aa10.8□□□□□ -0.68
CDC42-IT1-201ENST00000431803 RNF20Q5VTR2 975 aa10.8□□□□□ -0.68
CDC42-IT1-201ENST00000431803 LIN28BQ6ZN17 250 aaKnown RBP eCLIP10.8□□□□□ -0.68
CDC42-IT1-201ENST00000431803 CENPQQ7L2Z9 268 aaPredicted RBP10.8□□□□□ -0.68
CDC42-IT1-201ENST00000431803 RPAINQ86UA6 219 aa10.8□□□□□ -0.68
CDC42-IT1-201ENST00000431803 SKAP1Q86WV1 359 aa10.8□□□□□ -0.68
CDC42-IT1-201ENST00000431803 TEX2Q8IWB9 1127 aa10.8□□□□□ -0.68
CDC42-IT1-201ENST00000431803 OSBPL7Q9BZF2 842 aa10.8□□□□□ -0.68
CDC42-IT1-201ENST00000431803 UBIAD1Q9Y5Z9 338 aa10.8□□□□□ -0.68
CDC42-IT1-201ENST00000431803 CNTNAP5Q8WYK1 1306 aa10.8□□□□□ -0.68
CDC42-IT1-201ENST00000431803 NRCAMQ92823 1304 aa10.8□□□□□ -0.68
CDC42-IT1-201ENST00000431803 SIP14410 1827 aa10.79□□□□□ -0.68
CDC42-IT1-201ENST00000431803 SPDYE3A6NKU9 549 aa10.79□□□□□ -0.68
CDC42-IT1-201ENST00000431803 GPR37O15354 613 aa10.79□□□□□ -0.68
CDC42-IT1-201ENST00000431803 CTSHP09668 335 aa10.79□□□□□ -0.68
CDC42-IT1-201ENST00000431803 BMP1P13497 986 aa10.79□□□□□ -0.68
CDC42-IT1-201ENST00000431803 TCF7P36402 384 aaPredicted RBP10.79□□□□□ -0.68
CDC42-IT1-201ENST00000431803 HTRA4P83105 476 aaPredicted RBP10.79□□□□□ -0.68
CDC42-IT1-201ENST00000431803 SP4Q02446 784 aa10.79□□□□□ -0.68
CDC42-IT1-201ENST00000431803 MTMR1Q13613 665 aa10.79□□□□□ -0.68
CDC42-IT1-201ENST00000431803 TSGA10IPQ3SY00 556 aa10.79□□□□□ -0.68
CDC42-IT1-201ENST00000431803 FAM26DQ5JW98 314 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms