RNA–Protein interactions for RNA: ENST00000431127.1

CTDSP1-203, Transcript of CTD small phosphatase 1, humanhuman

TSL 3

Gene CTDSP1, Length 586 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-203ENST00000431127 ZSCAN21Q9Y5A6 473 aaPredicted RBP19.65■□□□□ 0.74
CTDSP1-203ENST00000431127 PCDHA10Q9Y5I2 948 aa19.65■□□□□ 0.74
CTDSP1-203ENST00000431127 UMODL1Q5DID0 1318 aa19.65■□□□□ 0.74
CTDSP1-203ENST00000431127 WDR64B1ANS9 1081 aa19.64■□□□□ 0.73
CTDSP1-203ENST00000431127 PSAPP07602 524 aa19.64■□□□□ 0.73
CTDSP1-203ENST00000431127 SFNP31947 248 aa19.64■□□□□ 0.73
CTDSP1-203ENST00000431127 RFC2P35250 354 aa19.64■□□□□ 0.73
CTDSP1-203ENST00000431127 ZNF200P98182 395 aaPredicted RBP19.64■□□□□ 0.73
CTDSP1-203ENST00000431127 GUCY1B3Q02153 619 aa19.64■□□□□ 0.73
CTDSP1-203ENST00000431127 EARS2Q5JPH6 523 aaKnown RBP19.64■□□□□ 0.73
CTDSP1-203ENST00000431127 SERINC5Q86VE9 423 aa19.64■□□□□ 0.73
CTDSP1-203ENST00000431127 RPUSD2Q8IZ73 545 aaKnown RBP19.64■□□□□ 0.73
CTDSP1-203ENST00000431127 DEFB123Q8N688 67 aa19.64■□□□□ 0.73
CTDSP1-203ENST00000431127 ETNPPLQ8TBG4 499 aa19.64■□□□□ 0.73
CTDSP1-203ENST00000431127 FAM20AQ96MK3 541 aa19.64■□□□□ 0.73
CTDSP1-203ENST00000431127 WNT8AQ9H1J5 351 aa19.64■□□□□ 0.73
CTDSP1-203ENST00000431127 FOXP1Q9H334 677 aaPredicted RBP19.64■□□□□ 0.73
CTDSP1-203ENST00000431127 IL23AQ9NPF7 189 aa19.64■□□□□ 0.73
CTDSP1-203ENST00000431127 ZNF302Q9NR11 478 aa19.64■□□□□ 0.73
CTDSP1-203ENST00000431127 SAMM50Q9Y512 469 aa19.64■□□□□ 0.73
CTDSP1-203ENST00000431127 RRN3P2A6NIE6 340 aa19.63■□□□□ 0.73
CTDSP1-203ENST00000431127 TBX3O15119 743 aa19.63■□□□□ 0.73
CTDSP1-203ENST00000431127 PSMD10O75832 226 aa19.63■□□□□ 0.73
CTDSP1-203ENST00000431127 PARNO95453 639 aaKnown RBP19.63■□□□□ 0.73
CTDSP1-203ENST00000431127 PFKMP08237 780 aa19.63■□□□□ 0.73
CTDSP1-203ENST00000431127 IQCF3P0C7M6 154 aa19.63■□□□□ 0.73
CTDSP1-203ENST00000431127 JAK3P52333 1124 aa19.63■□□□□ 0.73
CTDSP1-203ENST00000431127 PPFIA1Q13136 1202 aa19.63■□□□□ 0.73
CTDSP1-203ENST00000431127 GNL2Q13823 731 aaKnown RBP19.63■□□□□ 0.73
CTDSP1-203ENST00000431127 HIC1Q14526 733 aa19.63■□□□□ 0.73
CTDSP1-203ENST00000431127 SHHQ15465 462 aa19.63■□□□□ 0.73
CTDSP1-203ENST00000431127 SWSAP1Q6NVH7 229 aa19.63■□□□□ 0.73
CTDSP1-203ENST00000431127 PSRC1Q6PGN9 363 aaPredicted RBP19.63■□□□□ 0.73
CTDSP1-203ENST00000431127 RDM1Q8NG50 284 aa19.63■□□□□ 0.73
CTDSP1-203ENST00000431127 DHX38Q92620 1227 aaKnown RBP19.63■□□□□ 0.73
CTDSP1-203ENST00000431127 TRPC6Q9Y210 931 aa19.63■□□□□ 0.73
CTDSP1-203ENST00000431127 POTEB3A0JP26 581 aa19.62■□□□□ 0.73
CTDSP1-203ENST00000431127 TREHO43280 583 aa19.62■□□□□ 0.73
CTDSP1-203ENST00000431127 SLC37A4O43826 429 aa19.62■□□□□ 0.73
CTDSP1-203ENST00000431127 MARCH6O60337 910 aa19.62■□□□□ 0.73
CTDSP1-203ENST00000431127 SELPP16109 830 aa19.62■□□□□ 0.73
CTDSP1-203ENST00000431127 EPHB4P54760 987 aa19.62■□□□□ 0.73
CTDSP1-203ENST00000431127 ADAM17P78536 824 aa19.62■□□□□ 0.73
CTDSP1-203ENST00000431127 GRIK4Q16099 956 aa19.62■□□□□ 0.73
CTDSP1-203ENST00000431127 PDXDC2PQ6P474 469 aa19.62■□□□□ 0.73
CTDSP1-203ENST00000431127 POTEBQ6S5H4 581 aa19.62■□□□□ 0.73
CTDSP1-203ENST00000431127 Q7L0L9 218 aa19.62■□□□□ 0.73
CTDSP1-203ENST00000431127 CCDC60Q8IWA6 550 aaPredicted RBP19.62■□□□□ 0.73
CTDSP1-203ENST00000431127 SLC17A8Q8NDX2 589 aa19.62■□□□□ 0.73
CTDSP1-203ENST00000431127 LMBR1Q8WVP7 490 aa19.62■□□□□ 0.73
CTDSP1-203ENST00000431127 KCNMB3Q9NPA1 279 aa19.62■□□□□ 0.73
CTDSP1-203ENST00000431127 DISC1Q9NRI5 854 aa19.62■□□□□ 0.73
CTDSP1-203ENST00000431127 SMC3Q9UQE7 1217 aa19.62■□□□□ 0.73
CTDSP1-203ENST00000431127 FAM205CA6NFA0 338 aa19.61■□□□□ 0.73
CTDSP1-203ENST00000431127 CAND2O75155 1236 aa19.61■□□□□ 0.73
CTDSP1-203ENST00000431127 BAG4O95429 457 aaKnown RBP19.61■□□□□ 0.73
CTDSP1-203ENST00000431127 CKBP12277 381 aa19.61■□□□□ 0.73
CTDSP1-203ENST00000431127 PLCB4Q15147 1175 aa19.61■□□□□ 0.73
CTDSP1-203ENST00000431127 TAF2Q6P1X5 1199 aa19.61■□□□□ 0.73
CTDSP1-203ENST00000431127 LRRC8DQ7L1W4 858 aa19.61■□□□□ 0.73
CTDSP1-203ENST00000431127 SLFN12Q8IYM2 578 aa19.61■□□□□ 0.73
CTDSP1-203ENST00000431127 ATP8B4Q8TF62 1192 aa19.61■□□□□ 0.73
CTDSP1-203ENST00000431127 SCLYQ96I15 445 aa19.61■□□□□ 0.73
CTDSP1-203ENST00000431127 MTMR10Q9NXD2 777 aa19.61■□□□□ 0.73
CTDSP1-203ENST00000431127 MAFBQ9Y5Q3 323 aaPredicted RBP19.61■□□□□ 0.73
CTDSP1-203ENST00000431127 HBP1O60381 514 aa19.6■□□□□ 0.73
CTDSP1-203ENST00000431127 FGBP02675 491 aa19.6■□□□□ 0.73
CTDSP1-203ENST00000431127 INSRRP14616 1297 aa19.6■□□□□ 0.73
CTDSP1-203ENST00000431127 GJB2P29033 226 aa19.6■□□□□ 0.73
CTDSP1-203ENST00000431127 TRIM71Q2Q1W2 868 aaKnown RBP19.6■□□□□ 0.73
CTDSP1-203ENST00000431127 TMEM240Q5SV17 173 aa19.6■□□□□ 0.73
CTDSP1-203ENST00000431127 C9orf50Q5SZB4 431 aa19.6■□□□□ 0.73
CTDSP1-203ENST00000431127 C16orf59Q7L2K0 433 aa19.6■□□□□ 0.73
CTDSP1-203ENST00000431127 NOSTRINQ8IVI9 506 aa19.6■□□□□ 0.73
CTDSP1-203ENST00000431127 CKAP2LQ8IYA6 745 aa19.6■□□□□ 0.73
CTDSP1-203ENST00000431127 GJA10Q969M2 543 aa19.6■□□□□ 0.73
CTDSP1-203ENST00000431127 RNPC3Q96LT9 517 aaKnown RBP19.6■□□□□ 0.73
CTDSP1-203ENST00000431127 BUD13Q9BRD0 619 aaKnown RBP eCLIP19.6■□□□□ 0.737e-11■■□□□ 12.4
CTDSP1-203ENST00000431127 MTIF3Q9H2K0 278 aaKnown RBP19.6■□□□□ 0.73
CTDSP1-203ENST00000431127 UNC45AQ9H3U1 944 aa19.6■□□□□ 0.73
CTDSP1-203ENST00000431127 TUBE1Q9UJT0 475 aa19.6■□□□□ 0.73
CTDSP1-203ENST00000431127 COL6A3P12111 3177 aa19.6■□□□□ 0.73
CTDSP1-203ENST00000431127 MBLAC1A4D2B0 266 aaPredicted RBP19.59■□□□□ 0.73
CTDSP1-203ENST00000431127 CHMP2AO43633 222 aa19.59■□□□□ 0.73
CTDSP1-203ENST00000431127 RPLP2P05387 115 aaKnown RBP19.59■□□□□ 0.73
CTDSP1-203ENST00000431127 ACRP10323 421 aa19.59■□□□□ 0.73
CTDSP1-203ENST00000431127 THPOP40225 353 aa19.59■□□□□ 0.73
CTDSP1-203ENST00000431127 CUL4AQ13619 759 aa19.59■□□□□ 0.73
CTDSP1-203ENST00000431127 B3GNT9Q6UX72 402 aa19.59■□□□□ 0.73
CTDSP1-203ENST00000431127 ZNF365Q70YC5 407 aa19.59■□□□□ 0.73
CTDSP1-203ENST00000431127 MIER3Q7Z3K6 550 aa19.59■□□□□ 0.73
CTDSP1-203ENST00000431127 RSPH3Q86UC2 560 aa19.59■□□□□ 0.73
CTDSP1-203ENST00000431127 FAM167AQ96KS9 214 aa19.59■□□□□ 0.73
CTDSP1-203ENST00000431127 GABBR1Q9UBS5 961 aa19.59■□□□□ 0.73
CTDSP1-203ENST00000431127 NEMFO60524 1076 aa19.58■□□□□ 0.72
CTDSP1-203ENST00000431127 U2AF2P26368 475 aaKnown RBP eCLIP19.58■□□□□ 0.72
CTDSP1-203ENST00000431127 IGBP1P78318 339 aa19.58■□□□□ 0.72
CTDSP1-203ENST00000431127 PPP2R5CQ13362 524 aa19.58■□□□□ 0.72
CTDSP1-203ENST00000431127 ORC2Q13416 577 aaPredicted RBP19.58■□□□□ 0.72
CTDSP1-203ENST00000431127 CALCRLQ16602 461 aa19.58■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms