RNA–Protein interactions for RNA: ENST00000430889.2

HOXC4-202, Transcript of homeobox C4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC4, Length 1,666 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC4-202ENST00000430889 CCDC122Q5T0U0 273 aa15.41■□□□□ 0.06
HOXC4-202ENST00000430889 SLC30A10Q6XR72 485 aa15.41■□□□□ 0.06
HOXC4-202ENST00000430889 SMCR8Q8TEV9 937 aaPredicted RBP15.41■□□□□ 0.06
HOXC4-202ENST00000430889 DYDC2Q96IM9 177 aa15.41■□□□□ 0.06
HOXC4-202ENST00000430889 KIAA1683Q9H0B3 1180 aa15.41■□□□□ 0.06
HOXC4-202ENST00000430889 EPC1Q9H2F5 836 aa15.41■□□□□ 0.06
HOXC4-202ENST00000430889 BCAS3Q9H6U6 928 aa15.41■□□□□ 0.06
HOXC4-202ENST00000430889 FHOD1Q9Y613 1164 aa15.41■□□□□ 0.06
HOXC4-202ENST00000430889 ASTN1O14525 1302 aa15.4■□□□□ 0.06
HOXC4-202ENST00000430889 PHIPQ8WWQ0 1821 aa15.4■□□□□ 0.06
HOXC4-202ENST00000430889 SSU72P8A0A1W2PR75 194 aa15.4■□□□□ 0.06
HOXC4-202ENST00000430889 WDR46O15213 610 aaKnown RBP15.4■□□□□ 0.06
HOXC4-202ENST00000430889 KRT86O43790 486 aa15.4■□□□□ 0.06
HOXC4-202ENST00000430889 EGFRP00533 1210 aa15.4■□□□□ 0.06
HOXC4-202ENST00000430889 TFRCP02786 760 aaKnown RBP15.4■□□□□ 0.06
HOXC4-202ENST00000430889 ARP10275 920 aa15.4■□□□□ 0.06
HOXC4-202ENST00000430889 BCRP11274 1271 aa15.4■□□□□ 0.06
HOXC4-202ENST00000430889 GAP43P17677 238 aa15.4■□□□□ 0.06
HOXC4-202ENST00000430889 ZNF131P52739 623 aa15.4■□□□□ 0.06
HOXC4-202ENST00000430889 ADAM9Q13443 819 aa15.4■□□□□ 0.06
HOXC4-202ENST00000430889 NFIL3Q16649 462 aa15.4■□□□□ 0.06
HOXC4-202ENST00000430889 FRMD5Q7Z6J6 570 aa15.4■□□□□ 0.06
HOXC4-202ENST00000430889 MSANTD4Q8NCY6 345 aa15.4■□□□□ 0.06
HOXC4-202ENST00000430889 EHBP1Q8NDI1 1231 aa15.4■□□□□ 0.06
HOXC4-202ENST00000430889 NEK11Q8NG66 645 aa15.4■□□□□ 0.06
HOXC4-202ENST00000430889 FIZ1Q96SL8 496 aa15.4■□□□□ 0.06
HOXC4-202ENST00000430889 ZNF341Q9BYN7 854 aa15.4■□□□□ 0.06
HOXC4-202ENST00000430889 GANQ9H2C0 597 aa15.4■□□□□ 0.06
HOXC4-202ENST00000430889 TAOK3Q9H2K8 898 aa15.4■□□□□ 0.06
HOXC4-202ENST00000430889 ANKZF1Q9H8Y5 726 aa15.4■□□□□ 0.06
HOXC4-202ENST00000430889 COL20A1Q9P218 1284 aa15.4■□□□□ 0.06
HOXC4-202ENST00000430889 MYO6Q9UM54 1294 aa15.4■□□□□ 0.06
HOXC4-202ENST00000430889 MYH10P35580 1976 aa15.4■□□□□ 0.06
HOXC4-202ENST00000430889 ZMYM2Q9UBW7 1377 aa15.39■□□□□ 0.05
HOXC4-202ENST00000430889 RBAK-RBAKDNI3L0D1 243 aa15.39■□□□□ 0.05
HOXC4-202ENST00000430889 CETN3O15182 167 aa15.39■□□□□ 0.05
HOXC4-202ENST00000430889 PJA2O43164 708 aa15.39■□□□□ 0.05
HOXC4-202ENST00000430889 TLR2O60603 784 aa15.39■□□□□ 0.05
HOXC4-202ENST00000430889 NR2F2P24468 414 aa15.39■□□□□ 0.05
HOXC4-202ENST00000430889 RPS12P25398 132 aaKnown RBP15.39■□□□□ 0.05
HOXC4-202ENST00000430889 EIF4A3P38919 411 aaKnown RBP15.39■□□□□ 0.05
HOXC4-202ENST00000430889 KIF11P52732 1056 aa15.39■□□□□ 0.05
HOXC4-202ENST00000430889 TUBB4BP68371 445 aa15.39■□□□□ 0.05
HOXC4-202ENST00000430889 CYP27A1Q02318 531 aa15.39■□□□□ 0.05
HOXC4-202ENST00000430889 CTTNQ14247 550 aaKnown RBP15.39■□□□□ 0.05
HOXC4-202ENST00000430889 EPHA7Q15375 998 aa15.39■□□□□ 0.05
HOXC4-202ENST00000430889 RRAGAQ7L523 313 aa15.39■□□□□ 0.05
HOXC4-202ENST00000430889 NIPA1Q7RTP0 329 aa15.39■□□□□ 0.05
HOXC4-202ENST00000430889 KRT26Q7Z3Y9 468 aa15.39■□□□□ 0.05
HOXC4-202ENST00000430889 KIAA1328Q86T90 577 aa15.39■□□□□ 0.05
HOXC4-202ENST00000430889 LPAR1Q92633 364 aa15.39■□□□□ 0.05
HOXC4-202ENST00000430889 CCDC42Q96M95 316 aa15.39■□□□□ 0.05
HOXC4-202ENST00000430889 AGBL1Q96MI9 1066 aa15.39■□□□□ 0.05
HOXC4-202ENST00000430889 MXRA8Q9BRK3 442 aa15.39■□□□□ 0.05
HOXC4-202ENST00000430889 WDR11Q9BZH6 1224 aa15.39■□□□□ 0.05
HOXC4-202ENST00000430889 TSGA10Q9BZW7 698 aa15.39■□□□□ 0.05
HOXC4-202ENST00000430889 UNC45AQ9H3U1 944 aa15.39■□□□□ 0.05
HOXC4-202ENST00000430889 TYW1Q9NV66 732 aaKnown RBP15.39■□□□□ 0.05
HOXC4-202ENST00000430889 WRAP73Q9P2S5 460 aaPredicted RBP15.39■□□□□ 0.05
HOXC4-202ENST00000430889 UTP18Q9Y5J1 556 aaKnown RBP eCLIP15.39■□□□□ 0.05
HOXC4-202ENST00000430889 ANO9A1A5B4 782 aa15.38■□□□□ 0.05
HOXC4-202ENST00000430889 EIF3DO15371 548 aaKnown RBP eCLIP15.38■□□□□ 0.05
HOXC4-202ENST00000430889 ERCC3P19447 782 aa15.38■□□□□ 0.05
HOXC4-202ENST00000430889 UBXN2AP68543 259 aa15.38■□□□□ 0.05
HOXC4-202ENST00000430889 SF3B2Q13435 895 aaKnown RBP15.38■□□□□ 0.05
HOXC4-202ENST00000430889 TNIP1Q15025 636 aa15.38■□□□□ 0.05
HOXC4-202ENST00000430889 DALRD3Q5D0E6 543 aaKnown RBP15.38■□□□□ 0.05
HOXC4-202ENST00000430889 RIT2Q99578 217 aa15.38■□□□□ 0.05
HOXC4-202ENST00000430889 PARD6BQ9BYG5 372 aa15.38■□□□□ 0.05
HOXC4-202ENST00000430889 NUCKS1Q9H1E3 243 aaKnown RBP15.38■□□□□ 0.05
HOXC4-202ENST00000430889 ARGLU1Q9NWB6 273 aaPredicted RBP15.38■□□□□ 0.05
HOXC4-202ENST00000430889 RAB21Q9UL25 225 aa15.38■□□□□ 0.05
HOXC4-202ENST00000430889 PCDHA13Q9Y5I0 950 aa15.38■□□□□ 0.05
HOXC4-202ENST00000430889 DUSP10Q9Y6W6 482 aa15.38■□□□□ 0.05
HOXC4-202ENST00000430889 WDR81Q562E7 1941 aa15.38■□□□□ 0.05
HOXC4-202ENST00000430889 COL11A1P12107 1806 aaPredicted RBP15.38■□□□□ 0.05
HOXC4-202ENST00000430889 SLC16A3O15427 465 aaKnown RBP15.38■□□□□ 0.05
HOXC4-202ENST00000430889 TGFB1I1O43294 461 aa15.38■□□□□ 0.05
HOXC4-202ENST00000430889 ATP8B1O43520 1251 aa15.38■□□□□ 0.05
HOXC4-202ENST00000430889 CALUO43852 315 aaPredicted RBP15.38■□□□□ 0.05
HOXC4-202ENST00000430889 GAS7O60861 476 aa15.38■□□□□ 0.05
HOXC4-202ENST00000430889 PRPF6O94906 941 aaKnown RBP15.38■□□□□ 0.05
HOXC4-202ENST00000430889 ATP1A1P05023 1023 aaKnown RBP15.38■□□□□ 0.05
HOXC4-202ENST00000430889 ITGB5P18084 799 aa15.38■□□□□ 0.05
HOXC4-202ENST00000430889 CC2D1AQ6P1N0 951 aaPredicted RBP15.38■□□□□ 0.05
HOXC4-202ENST00000430889 SMAP1Q8IYB5 467 aaPredicted RBP15.38■□□□□ 0.05
HOXC4-202ENST00000430889 PRPF38AQ8NAV1 312 aaKnown RBP15.38■□□□□ 0.05
HOXC4-202ENST00000430889 PIGOQ8TEQ8 1089 aa15.38■□□□□ 0.05
HOXC4-202ENST00000430889 BORCS6Q96GS4 357 aa15.38■□□□□ 0.05
HOXC4-202ENST00000430889 LSM14BQ9BX40 385 aaKnown RBP15.38■□□□□ 0.05
HOXC4-202ENST00000430889 TANGO6Q9C0B7 1094 aa15.38■□□□□ 0.05
HOXC4-202ENST00000430889 ZHX3Q9H4I2 956 aa15.38■□□□□ 0.05
HOXC4-202ENST00000430889 SLC38A10Q9HBR0 1119 aa15.38■□□□□ 0.05
HOXC4-202ENST00000430889 CCPG1Q9ULG6 757 aa15.38■□□□□ 0.05
HOXC4-202ENST00000430889 LTBP3Q9NS15 1303 aa15.37■□□□□ 0.05
HOXC4-202ENST00000430889 NFIBO00712 420 aa15.37■□□□□ 0.05
HOXC4-202ENST00000430889 CTNND1O60716 968 aaKnown RBP15.37■□□□□ 0.05
HOXC4-202ENST00000430889 TBCAO75347 108 aaKnown RBP15.37■□□□□ 0.05
HOXC4-202ENST00000430889 IPO7O95373 1038 aaKnown RBP15.37■□□□□ 0.05
HOXC4-202ENST00000430889 PNMA6AP0CW24 399 aaPredicted RBP15.37■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms