RNA–Protein interactions for RNA: ENST00000430858.1

HDAC6-207, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 618 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-207ENST00000430858 MIS18BP1Q6P0N0 1132 aa11.13□□□□□ -0.63
HDAC6-207ENST00000430858 TAF2Q6P1X5 1199 aa11.13□□□□□ -0.63
HDAC6-207ENST00000430858 TRAF7Q6Q0C0 670 aa11.13□□□□□ -0.63
HDAC6-207ENST00000430858 ABHD15Q6UXT9 468 aa11.13□□□□□ -0.63
HDAC6-207ENST00000430858 SMAP1Q8IYB5 467 aaPredicted RBP11.13□□□□□ -0.63
HDAC6-207ENST00000430858 NSUN7Q8NE18 718 aaKnown RBP11.13□□□□□ -0.63
HDAC6-207ENST00000430858 LENG9Q96B70 501 aa11.13□□□□□ -0.63
HDAC6-207ENST00000430858 KIF2CQ99661 725 aa11.13□□□□□ -0.63
HDAC6-207ENST00000430858 UPF2Q9HAU5 1272 aaKnown RBP11.13□□□□□ -0.63
HDAC6-207ENST00000430858 CYP3A7-CYP3A51PA0A087WV96 503 aa11.12□□□□□ -0.63
HDAC6-207ENST00000430858 CCDC194A0A1B0GVG4 234 aa11.12□□□□□ -0.63
HDAC6-207ENST00000430858 MBLAC1A4D2B0 266 aaPredicted RBP11.12□□□□□ -0.63
HDAC6-207ENST00000430858 BACH1O14867 736 aa11.12□□□□□ -0.63
HDAC6-207ENST00000430858 NBNO60934 754 aa11.12□□□□□ -0.63
HDAC6-207ENST00000430858 RPLP2P05387 115 aaKnown RBP11.12□□□□□ -0.63
HDAC6-207ENST00000430858 FDPSP14324 419 aaKnown RBP11.12□□□□□ -0.63
HDAC6-207ENST00000430858 ATP2A2P16615 1042 aaKnown RBP11.12□□□□□ -0.63
HDAC6-207ENST00000430858 CYP3A7P24462 503 aa11.12□□□□□ -0.63
HDAC6-207ENST00000430858 RAB30Q15771 203 aa11.12□□□□□ -0.63
HDAC6-207ENST00000430858 Q4G0T1 1027 aa11.12□□□□□ -0.63
HDAC6-207ENST00000430858 FAM160B1Q5W0V3 765 aa11.12□□□□□ -0.63
HDAC6-207ENST00000430858 CNKSR3Q6P9H4 555 aa11.12□□□□□ -0.63
HDAC6-207ENST00000430858 RPAINQ86UA6 219 aa11.12□□□□□ -0.63
HDAC6-207ENST00000430858 RSPH3Q86UC2 560 aa11.12□□□□□ -0.63
HDAC6-207ENST00000430858 IL27Q8NEV9 243 aa11.12□□□□□ -0.63
HDAC6-207ENST00000430858 PHOSPHO2Q8TCD6 241 aa11.12□□□□□ -0.63
HDAC6-207ENST00000430858 TIFAQ96CG3 184 aa11.12□□□□□ -0.63
HDAC6-207ENST00000430858 ZSCAN31Q96LW9 406 aaPredicted RBP11.12□□□□□ -0.63
HDAC6-207ENST00000430858 RIT2Q99578 217 aa11.12□□□□□ -0.63
HDAC6-207ENST00000430858 PBX4Q9BYU1 374 aa11.12□□□□□ -0.63
HDAC6-207ENST00000430858 SEMA6BQ9H3T3 888 aa11.12□□□□□ -0.63
HDAC6-207ENST00000430858 BRMS1Q9HCU9 246 aa11.12□□□□□ -0.63
HDAC6-207ENST00000430858 MSRAQ9UJ68 235 aa11.12□□□□□ -0.63
HDAC6-207ENST00000430858 TUBE1Q9UJT0 475 aa11.12□□□□□ -0.63
HDAC6-207ENST00000430858 TRPC6Q9Y210 931 aa11.12□□□□□ -0.63
HDAC6-207ENST00000430858 SZT2Q5T011 3432 aa11.12□□□□□ -0.63
HDAC6-207ENST00000430858 DOCK5Q9H7D0 1870 aa11.11□□□□□ -0.63
HDAC6-207ENST00000430858 ABHD14A-ACY1A0A1B0GW23 586 aa11.11□□□□□ -0.63
HDAC6-207ENST00000430858 POTEB3A0JP26 581 aa11.11□□□□□ -0.63
HDAC6-207ENST00000430858 GRXCR1A8MXD5 290 aa11.11□□□□□ -0.63
HDAC6-207ENST00000430858 MSH4O15457 936 aa11.11□□□□□ -0.63
HDAC6-207ENST00000430858 HBP1O60381 514 aa11.11□□□□□ -0.63
HDAC6-207ENST00000430858 EFCAB14O75071 495 aa11.11□□□□□ -0.63
HDAC6-207ENST00000430858 PSAPP07602 524 aa11.11□□□□□ -0.63
HDAC6-207ENST00000430858 INSRRP14616 1297 aa11.11□□□□□ -0.63
HDAC6-207ENST00000430858 TRIM29Q14134 588 aa11.11□□□□□ -0.63
HDAC6-207ENST00000430858 PLCB4Q15147 1175 aa11.11□□□□□ -0.63
HDAC6-207ENST00000430858 INF2Q27J81 1249 aa11.11□□□□□ -0.63
HDAC6-207ENST00000430858 MARCH8Q5T0T0 291 aa11.11□□□□□ -0.63
HDAC6-207ENST00000430858 SWSAP1Q6NVH7 229 aa11.11□□□□□ -0.63
HDAC6-207ENST00000430858 PDXDC2PQ6P474 469 aa11.11□□□□□ -0.63
HDAC6-207ENST00000430858 POTEBQ6S5H4 581 aa11.11□□□□□ -0.63
HDAC6-207ENST00000430858 NEK8Q86SG6 692 aa11.11□□□□□ -0.63
HDAC6-207ENST00000430858 CCDC60Q8IWA6 550 aaPredicted RBP11.11□□□□□ -0.63
HDAC6-207ENST00000430858 MBOAT7Q96N66 472 aa11.11□□□□□ -0.63
HDAC6-207ENST00000430858 UIMC1Q96RL1 719 aa11.11□□□□□ -0.63
HDAC6-207ENST00000430858 SLC9A7Q96T83 725 aa11.11□□□□□ -0.63
HDAC6-207ENST00000430858 TEKT3Q9BXF9 490 aa11.11□□□□□ -0.63
HDAC6-207ENST00000430858 ZNF302Q9NR11 478 aa11.11□□□□□ -0.63
HDAC6-207ENST00000430858 SH2B1Q9NRF2 756 aaPredicted RBP11.11□□□□□ -0.63
HDAC6-207ENST00000430858 GJB4Q9NTQ9 266 aa11.11□□□□□ -0.63
HDAC6-207ENST00000430858 PCDHA10Q9Y5I2 948 aa11.11□□□□□ -0.63
HDAC6-207ENST00000430858 TANC1Q9C0D5 1861 aa11.1□□□□□ -0.63
HDAC6-207ENST00000430858 WDR64B1ANS9 1081 aa11.1□□□□□ -0.63
HDAC6-207ENST00000430858 JAK2O60674 1132 aa11.1□□□□□ -0.63
HDAC6-207ENST00000430858 GAS7O60861 476 aa11.1□□□□□ -0.63
HDAC6-207ENST00000430858 DTNBO60941 627 aa11.1□□□□□ -0.63
HDAC6-207ENST00000430858 TDP2O95551 362 aa11.1□□□□□ -0.63
HDAC6-207ENST00000430858 GCFC2P16383 781 aaKnown RBP11.1□□□□□ -0.63
HDAC6-207ENST00000430858 SFNP31947 248 aa11.1□□□□□ -0.63
HDAC6-207ENST00000430858 KRT2P35908 639 aa11.1□□□□□ -0.63
HDAC6-207ENST00000430858 PBX2P40425 430 aa11.1□□□□□ -0.63
HDAC6-207ENST00000430858 KCNJ6P48051 423 aa11.1□□□□□ -0.63
HDAC6-207ENST00000430858 JAK3P52333 1124 aa11.1□□□□□ -0.63
HDAC6-207ENST00000430858 IGBP1P78318 339 aa11.1□□□□□ -0.63
HDAC6-207ENST00000430858 ST3GAL1Q11201 340 aa11.1□□□□□ -0.63
HDAC6-207ENST00000430858 IKBKEQ14164 716 aa11.1□□□□□ -0.63
HDAC6-207ENST00000430858 MBTPS1Q14703 1052 aa11.1□□□□□ -0.63
HDAC6-207ENST00000430858 RABEP1Q15276 862 aa11.1□□□□□ -0.63
HDAC6-207ENST00000430858 LETM2Q2VYF4 491 aa11.1□□□□□ -0.63
HDAC6-207ENST00000430858 FAM26DQ5JW98 314 aa11.1□□□□□ -0.63
HDAC6-207ENST00000430858 LRCH2Q5VUJ6 765 aa11.1□□□□□ -0.63
HDAC6-207ENST00000430858 PPP4R3AQ6IN85 833 aa11.1□□□□□ -0.63
HDAC6-207ENST00000430858 RUFY4Q6ZNE9 571 aa11.1□□□□□ -0.63
HDAC6-207ENST00000430858 PIK3AP1Q6ZUJ8 805 aa11.1□□□□□ -0.63
HDAC6-207ENST00000430858 CCDC83Q8IWF9 413 aa11.1□□□□□ -0.63
HDAC6-207ENST00000430858 ATP8B4Q8TF62 1192 aa11.1□□□□□ -0.63
HDAC6-207ENST00000430858 SLC5A5Q92911 643 aa11.1□□□□□ -0.63
HDAC6-207ENST00000430858 FAM161BQ96MY7 647 aa11.1□□□□□ -0.63
HDAC6-207ENST00000430858 GUCD1Q96NT3 240 aa11.1□□□□□ -0.63
HDAC6-207ENST00000430858 NAP1L4Q99733 375 aaKnown RBP11.1□□□□□ -0.63
HDAC6-207ENST00000430858 LLPHQ9BRT6 129 aaKnown RBP11.1□□□□□ -0.63
HDAC6-207ENST00000430858 TTYH1Q9H313 450 aaPredicted RBP11.1□□□□□ -0.63
HDAC6-207ENST00000430858 DDX25Q9UHL0 483 aaKnown RBP11.1□□□□□ -0.63
HDAC6-207ENST00000430858 STXBP5LQ9Y2K9 1186 aa11.1□□□□□ -0.63
HDAC6-207ENST00000430858 SAMM50Q9Y512 469 aa11.1□□□□□ -0.63
HDAC6-207ENST00000430858 PCDHA2Q9Y5H9 948 aa11.1□□□□□ -0.63
HDAC6-207ENST00000430858 PCDHA11Q9Y5I1 949 aa11.1□□□□□ -0.63
HDAC6-207ENST00000430858 MAFBQ9Y5Q3 323 aaPredicted RBP11.1□□□□□ -0.63
HDAC6-207ENST00000430858 COL1A2P08123 1366 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms