RNA–Protein interactions for RNA: ENST00000430118.1

HMGB3-203, Transcript of high mobility group box 3, humanhuman

TSL 1 (best)

Gene HMGB3, Length 529 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3-203ENST00000430118 COQ6Q9Y2Z9 468 aa5.26□□□□□ -1.57
HMGB3-203ENST00000430118 PTPN23Q9H3S7 1636 aa5.26□□□□□ -1.57
HMGB3-203ENST00000430118 GCC2Q8IWJ2 1684 aa5.25□□□□□ -1.57
HMGB3-203ENST00000430118 NOS1P29475 1434 aa5.25□□□□□ -1.57
HMGB3-203ENST00000430118 PTPDC1A2A3K4 754 aa5.25□□□□□ -1.57
HMGB3-203ENST00000430118 TRIM75PA6NK02 468 aa5.25□□□□□ -1.57
HMGB3-203ENST00000430118 PRR33A8MZF0 331 aa5.25□□□□□ -1.57
HMGB3-203ENST00000430118 GSTM1P09488 218 aa5.25□□□□□ -1.57
HMGB3-203ENST00000430118 YBX3P16989 372 aaKnown RBP eCLIP5.25□□□□□ -1.57
HMGB3-203ENST00000430118 ZSCAN20P17040 1043 aaPredicted RBP5.25□□□□□ -1.57
HMGB3-203ENST00000430118 RECQLP46063 649 aaPredicted RBP5.25□□□□□ -1.57
HMGB3-203ENST00000430118 RPL11P62913 178 aaKnown RBP5.25□□□□□ -1.57
HMGB3-203ENST00000430118 IDI1Q13907 227 aa5.25□□□□□ -1.57
HMGB3-203ENST00000430118 MLC1Q15049 377 aa5.25□□□□□ -1.57
HMGB3-203ENST00000430118 SKOR2Q2VWA4 1001 aaPredicted RBP5.25□□□□□ -1.57
HMGB3-203ENST00000430118 LONRF3Q496Y0 759 aa5.25□□□□□ -1.57
HMGB3-203ENST00000430118 MAP9Q49MG5 647 aa5.25□□□□□ -1.57
HMGB3-203ENST00000430118 DGKHQ86XP1 1220 aa5.25□□□□□ -1.57
HMGB3-203ENST00000430118 NXPE1Q8N323 547 aa5.25□□□□□ -1.57
HMGB3-203ENST00000430118 USHBP1Q8N6Y0 703 aa5.25□□□□□ -1.57
HMGB3-203ENST00000430118 C2orf69Q8N8R5 385 aa5.25□□□□□ -1.57
HMGB3-203ENST00000430118 JPH3Q8WXH2 748 aaPredicted RBP5.25□□□□□ -1.57
HMGB3-203ENST00000430118 SSH1Q8WYL5 1049 aa5.25□□□□□ -1.57
HMGB3-203ENST00000430118 SLC5A5Q92911 643 aa5.25□□□□□ -1.57
HMGB3-203ENST00000430118 AHCYL2Q96HN2 611 aaKnown RBP5.25□□□□□ -1.57
HMGB3-203ENST00000430118 GPR101Q96P66 508 aaPredicted RBP5.25□□□□□ -1.57
HMGB3-203ENST00000430118 SSBP4Q9BWG4 385 aaPredicted RBP5.25□□□□□ -1.57
HMGB3-203ENST00000430118 PRDM11Q9NQV5 511 aa5.25□□□□□ -1.57
HMGB3-203ENST00000430118 THG1LQ9NWX6 298 aaKnown RBP5.25□□□□□ -1.57
HMGB3-203ENST00000430118 MINPP1Q9UNW1 487 aa5.25□□□□□ -1.57
HMGB3-203ENST00000430118 ANKRD6Q9Y2G4 727 aa5.25□□□□□ -1.57
HMGB3-203ENST00000430118 GIT1Q9Y2X7 761 aa5.25□□□□□ -1.57
HMGB3-203ENST00000430118 TIMM13Q9Y5L4 95 aaPredicted RBP5.25□□□□□ -1.57
HMGB3-203ENST00000430118 TNKS1BP1Q9C0C2 1729 aaKnown RBP5.25□□□□□ -1.57
HMGB3-203ENST00000430118 CFAP65Q6ZU64 1925 aaKnown RBP5.25□□□□□ -1.57
HMGB3-203ENST00000430118 CROCC2H7BZ55 1655 aa5.24□□□□□ -1.57
HMGB3-203ENST00000430118 ADGRL3Q9HAR2 1447 aa5.24□□□□□ -1.57
HMGB3-203ENST00000430118 SSU72P8A0A1W2PR75 194 aa5.24□□□□□ -1.57
HMGB3-203ENST00000430118 H7C1D1 291 aa5.24□□□□□ -1.57
HMGB3-203ENST00000430118 SNUPNO95149 360 aaKnown RBP5.24□□□□□ -1.57
HMGB3-203ENST00000430118 SYPP08247 313 aa5.24□□□□□ -1.57
HMGB3-203ENST00000430118 RBP3P10745 1247 aa5.24□□□□□ -1.57
HMGB3-203ENST00000430118 LCP1P13796 627 aa5.24□□□□□ -1.57
HMGB3-203ENST00000430118 PURAQ00577 322 aaKnown RBP5.24□□□□□ -1.57
HMGB3-203ENST00000430118 OS9Q13438 667 aaPredicted RBP5.24□□□□□ -1.57
HMGB3-203ENST00000430118 GTF2H3Q13889 308 aa5.24□□□□□ -1.57
HMGB3-203ENST00000430118 VPS72Q15906 364 aa5.24□□□□□ -1.57
HMGB3-203ENST00000430118 DDB1Q16531 1140 aa5.24□□□□□ -1.57
HMGB3-203ENST00000430118 PTPN21Q16825 1174 aa5.24□□□□□ -1.57
HMGB3-203ENST00000430118 CREB3L3Q68CJ9 461 aa5.24□□□□□ -1.57
HMGB3-203ENST00000430118 HHIPL2Q6UWX4 724 aa5.24□□□□□ -1.57
HMGB3-203ENST00000430118 CHTF18Q8WVB6 975 aa5.24□□□□□ -1.57
HMGB3-203ENST00000430118 FUBP3Q96I24 572 aaKnown RBP eCLIP5.24□□□□□ -1.57
HMGB3-203ENST00000430118 DCAF5Q96JK2 942 aa5.24□□□□□ -1.57
HMGB3-203ENST00000430118 RPS6KC1Q96S38 1066 aa5.24□□□□□ -1.57
HMGB3-203ENST00000430118 IPPKQ9H8X2 491 aa5.24□□□□□ -1.57
HMGB3-203ENST00000430118 SPTLC3Q9NUV7 552 aa5.24□□□□□ -1.57
HMGB3-203ENST00000430118 OXSMQ9NWU1 459 aa5.24□□□□□ -1.57
HMGB3-203ENST00000430118 RAXQ9Y2V3 346 aa5.24□□□□□ -1.57
HMGB3-203ENST00000430118 PCDHA2Q9Y5H9 948 aa5.24□□□□□ -1.57
HMGB3-203ENST00000430118 SPO11Q9Y5K1 396 aa5.24□□□□□ -1.57
HMGB3-203ENST00000430118 SNX11Q9Y5W9 270 aa5.24□□□□□ -1.57
HMGB3-203ENST00000430118 COMMD10Q9Y6G5 202 aa5.24□□□□□ -1.57
HMGB3-203ENST00000430118 ADGRB2O60241 1585 aa5.24□□□□□ -1.57
HMGB3-203ENST00000430118 COL22A1Q8NFW1 1626 aaPredicted RBP5.23□□□□□ -1.57
HMGB3-203ENST00000430118 SLC12A8A0AV02 714 aa5.23□□□□□ -1.57
HMGB3-203ENST00000430118 ZNF561-AS1K7EIQ3 104 aa5.23□□□□□ -1.57
HMGB3-203ENST00000430118 FZD9O00144 591 aa5.23□□□□□ -1.57
HMGB3-203ENST00000430118 ERC2O15083 957 aa5.23□□□□□ -1.57
HMGB3-203ENST00000430118 NPHS1O60500 1241 aa5.23□□□□□ -1.57
HMGB3-203ENST00000430118 SRGAP2CP0DJJ0 459 aa5.23□□□□□ -1.57
HMGB3-203ENST00000430118 CCND1P24385 295 aa5.23□□□□□ -1.57
HMGB3-203ENST00000430118 COL8A1P27658 744 aa5.23□□□□□ -1.57
HMGB3-203ENST00000430118 LSP1P33241 339 aa5.23□□□□□ -1.57
HMGB3-203ENST00000430118 CYP2C19P33261 490 aa5.23□□□□□ -1.57
HMGB3-203ENST00000430118 OXCT1P55809 520 aa5.23□□□□□ -1.57
HMGB3-203ENST00000430118 ZNF174Q15697 407 aa5.23□□□□□ -1.57
HMGB3-203ENST00000430118 GPR19Q15760 415 aa5.23□□□□□ -1.57
HMGB3-203ENST00000430118 INF2Q27J81 1249 aa5.23□□□□□ -1.57
HMGB3-203ENST00000430118 PLA2G4EQ3MJ16 856 aa5.23□□□□□ -1.57
HMGB3-203ENST00000430118 MINDY4Q4G0A6 757 aa5.23□□□□□ -1.57
HMGB3-203ENST00000430118 DUSP27Q5VZP5 1158 aa5.23□□□□□ -1.57
HMGB3-203ENST00000430118 C14orf80Q86SX3 495 aa5.23□□□□□ -1.57
HMGB3-203ENST00000430118 RASSF3Q86WH2 238 aa5.23□□□□□ -1.57
HMGB3-203ENST00000430118 ZZZ3Q8IYH5 903 aa5.23□□□□□ -1.57
HMGB3-203ENST00000430118 CPA6Q8N4T0 437 aa5.23□□□□□ -1.57
HMGB3-203ENST00000430118 CLRN3Q8NCR9 226 aa5.23□□□□□ -1.57
HMGB3-203ENST00000430118 C1orf162Q8NEQ5 155 aaPredicted RBP5.23□□□□□ -1.57
HMGB3-203ENST00000430118 FCRL2Q96LA5 508 aaPredicted RBP5.23□□□□□ -1.57
HMGB3-203ENST00000430118 AIFM3Q96NN9 605 aa5.23□□□□□ -1.57
HMGB3-203ENST00000430118 CDIP1Q9H305 208 aa5.23□□□□□ -1.57
HMGB3-203ENST00000430118 ZNF652Q9Y2D9 606 aa5.23□□□□□ -1.57
HMGB3-203ENST00000430118 ZNF281Q9Y2X9 895 aa5.23□□□□□ -1.57
HMGB3-203ENST00000430118 LUC7L2Q9Y383 392 aaKnown RBP5.23□□□□□ -1.57
HMGB3-203ENST00000430118 MRFAP1Q9Y605 127 aa5.23□□□□□ -1.57
HMGB3-203ENST00000430118 LAMC1P11047 1609 aa5.23□□□□□ -1.57
HMGB3-203ENST00000430118 LRPPRCP42704 1394 aaKnown RBP5.22□□□□□ -1.57
HMGB3-203ENST00000430118 ANKRD30AQ9BXX3 1397 aa5.22□□□□□ -1.57
HMGB3-203ENST00000430118 MSTNO14793 375 aa5.22□□□□□ -1.57
HMGB3-203ENST00000430118 GSC2O15499 205 aa5.22□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms