RNA–Protein interactions for RNA: ENST00000428892.1

APOBEC3C-202, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3C, humanhuman

TSL 3

Gene APOBEC3C, Length 1,056 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3C-202ENST00000428892 SYNE3Q6ZMZ3 975 aa12.45□□□□□ -0.42
APOBEC3C-202ENST00000428892 ATP6V0A1Q93050 837 aa12.45□□□□□ -0.42
APOBEC3C-202ENST00000428892 RRP36Q96EU6 259 aaKnown RBP12.45□□□□□ -0.42
APOBEC3C-202ENST00000428892 NSUN3Q9H649 340 aaKnown RBP12.45□□□□□ -0.42
APOBEC3C-202ENST00000428892 CLDND1Q9NY35 253 aa12.45□□□□□ -0.42
APOBEC3C-202ENST00000428892 FRMPD4Q14CM0 1322 aa12.44□□□□□ -0.42
APOBEC3C-202ENST00000428892 GOLGA8AA7E2F4 631 aa12.44□□□□□ -0.42
APOBEC3C-202ENST00000428892 GOLGA8BA8MQT2 603 aa12.44□□□□□ -0.42
APOBEC3C-202ENST00000428892 HAS3O00219 553 aa12.44□□□□□ -0.42
APOBEC3C-202ENST00000428892 EIF5BO60841 1220 aaKnown RBP12.44□□□□□ -0.42
APOBEC3C-202ENST00000428892 PPFIA4O75335 1185 aa12.44□□□□□ -0.42
APOBEC3C-202ENST00000428892 CTSHP09668 335 aa12.44□□□□□ -0.42
APOBEC3C-202ENST00000428892 CTNNB1P35222 781 aa12.44□□□□□ -0.42
APOBEC3C-202ENST00000428892 ANP32AP39687 249 aaKnown RBP12.44□□□□□ -0.42
APOBEC3C-202ENST00000428892 MRE11P49959 708 aa12.44□□□□□ -0.42
APOBEC3C-202ENST00000428892 HTRA4P83105 476 aaPredicted RBP12.44□□□□□ -0.42
APOBEC3C-202ENST00000428892 MBTPS1Q14703 1052 aa12.44□□□□□ -0.42
APOBEC3C-202ENST00000428892 TRIM71Q2Q1W2 868 aaKnown RBP12.44□□□□□ -0.42
APOBEC3C-202ENST00000428892 TCEAL5Q5H9L2 206 aa12.44□□□□□ -0.42
APOBEC3C-202ENST00000428892 TMEM192Q8IY95 271 aa12.44□□□□□ -0.42
APOBEC3C-202ENST00000428892 WNT8BQ93098 351 aa12.44□□□□□ -0.42
APOBEC3C-202ENST00000428892 PABPC5Q96DU9 382 aaKnown RBP12.44□□□□□ -0.42
APOBEC3C-202ENST00000428892 IFIH1Q9BYX4 1025 aaKnown RBP12.44□□□□□ -0.42
APOBEC3C-202ENST00000428892 UPF3BQ9BZI7 483 aaKnown RBP12.44□□□□□ -0.42
APOBEC3C-202ENST00000428892 PRKAG3Q9UGI9 489 aa12.44□□□□□ -0.42
APOBEC3C-202ENST00000428892 CYP46A1Q9Y6A2 500 aa12.44□□□□□ -0.42
APOBEC3C-202ENST00000428892 COL4A6Q14031 1691 aa12.44□□□□□ -0.42
APOBEC3C-202ENST00000428892 KIAA1671Q9BY89 1806 aa12.44□□□□□ -0.42
APOBEC3C-202ENST00000428892 LOXHD1Q8IVV2 1947 aa12.43□□□□□ -0.42
APOBEC3C-202ENST00000428892 hCG_1642624A0A1W2PR95 340 aa12.43□□□□□ -0.42
APOBEC3C-202ENST00000428892 H3BNC9 293 aa12.43□□□□□ -0.42
APOBEC3C-202ENST00000428892 PIK3CDO00329 1044 aa12.43□□□□□ -0.42
APOBEC3C-202ENST00000428892 GNAT1P11488 350 aa12.43□□□□□ -0.42
APOBEC3C-202ENST00000428892 CCND2P30279 289 aa12.43□□□□□ -0.42
APOBEC3C-202ENST00000428892 ADD1P35611 737 aaKnown RBP12.43□□□□□ -0.42
APOBEC3C-202ENST00000428892 NTRK3Q16288 839 aa12.43□□□□□ -0.42
APOBEC3C-202ENST00000428892 HSDL1Q3SXM5 330 aa12.43□□□□□ -0.42
APOBEC3C-202ENST00000428892 PLEKHG4Q58EX7 1191 aa12.43□□□□□ -0.42
APOBEC3C-202ENST00000428892 CELF3Q5SZQ8 465 aaKnown RBP12.43□□□□□ -0.42
APOBEC3C-202ENST00000428892 MYSM1Q5VVJ2 828 aa12.43□□□□□ -0.42
APOBEC3C-202ENST00000428892 SERINC5Q86VE9 423 aa12.43□□□□□ -0.42
APOBEC3C-202ENST00000428892 NEK9Q8TD19 979 aa12.43□□□□□ -0.42
APOBEC3C-202ENST00000428892 SP7Q8TDD2 431 aaPredicted RBP12.43□□□□□ -0.42
APOBEC3C-202ENST00000428892 PIBF1Q8WXW3 757 aa12.43□□□□□ -0.42
APOBEC3C-202ENST00000428892 APBB2Q92870 758 aa12.43□□□□□ -0.42
APOBEC3C-202ENST00000428892 POP1Q99575 1024 aaKnown RBP12.43□□□□□ -0.42
APOBEC3C-202ENST00000428892 H3BRB1 525 aa12.42□□□□□ -0.42
APOBEC3C-202ENST00000428892 GCOM1H8Y6P7 765 aaPredicted RBP12.42□□□□□ -0.42
APOBEC3C-202ENST00000428892 MEIS2O14770 477 aa12.42□□□□□ -0.42
APOBEC3C-202ENST00000428892 NCK2O43639 380 aa12.42□□□□□ -0.42
APOBEC3C-202ENST00000428892 CAND2O75155 1236 aa12.42□□□□□ -0.42
APOBEC3C-202ENST00000428892 CSPG5O95196 566 aa12.42□□□□□ -0.42
APOBEC3C-202ENST00000428892 POLR2MP0CAP2 368 aa12.42□□□□□ -0.42
APOBEC3C-202ENST00000428892 SMIM10L2AP0DMW4 78 aa12.42□□□□□ -0.42
APOBEC3C-202ENST00000428892 SMIM10L2BP0DMW5 78 aa12.42□□□□□ -0.42
APOBEC3C-202ENST00000428892 UBA1P22314 1058 aaKnown RBP12.42□□□□□ -0.42
APOBEC3C-202ENST00000428892 PDIA3P30101 505 aaKnown RBP12.42□□□□□ -0.42
APOBEC3C-202ENST00000428892 HOXA13P31271 388 aaPredicted RBP12.42□□□□□ -0.42
APOBEC3C-202ENST00000428892 METAP2P50579 478 aaKnown RBP eCLIP12.42□□□□□ -0.42
APOBEC3C-202ENST00000428892 FGD1P98174 961 aa12.42□□□□□ -0.42
APOBEC3C-202ENST00000428892 PGM5Q15124 567 aa12.42□□□□□ -0.42
APOBEC3C-202ENST00000428892 GNPTABQ3T906 1256 aa12.42□□□□□ -0.42
APOBEC3C-202ENST00000428892 TYW1BQ6NUM6 668 aa12.42□□□□□ -0.42
APOBEC3C-202ENST00000428892 TRAF7Q6Q0C0 670 aa12.42□□□□□ -0.42
APOBEC3C-202ENST00000428892 RPAINQ86UA6 219 aa12.42□□□□□ -0.42
APOBEC3C-202ENST00000428892 CCDC82Q8N4S0 544 aa12.42□□□□□ -0.42
APOBEC3C-202ENST00000428892 FIBCD1Q8N539 461 aa12.42□□□□□ -0.42
APOBEC3C-202ENST00000428892 TOP1MTQ969P6 601 aa12.42□□□□□ -0.42
APOBEC3C-202ENST00000428892 PDCD2LQ9BRP1 358 aa12.42□□□□□ -0.42
APOBEC3C-202ENST00000428892 KCNH6Q9H252 994 aa12.42□□□□□ -0.42
APOBEC3C-202ENST00000428892 TUT1Q9H6E5 874 aaKnown RBP12.42□□□□□ -0.42
APOBEC3C-202ENST00000428892 UPF2Q9HAU5 1272 aaKnown RBP12.42□□□□□ -0.42
APOBEC3C-202ENST00000428892 SEC63Q9UGP8 760 aaKnown RBP12.42□□□□□ -0.42
APOBEC3C-202ENST00000428892 ZNF215Q9UL58 517 aaPredicted RBP12.42□□□□□ -0.42
APOBEC3C-202ENST00000428892 RWDD3Q9Y3V2 267 aa12.42□□□□□ -0.42
APOBEC3C-202ENST00000428892 TREHO43280 583 aa12.41□□□□□ -0.42
APOBEC3C-202ENST00000428892 LGALS2P05162 132 aa12.41□□□□□ -0.42
APOBEC3C-202ENST00000428892 TGFB3P10600 412 aa12.41□□□□□ -0.42
APOBEC3C-202ENST00000428892 NHLH1Q02575 133 aa12.41□□□□□ -0.42
APOBEC3C-202ENST00000428892 ZP2Q05996 745 aa12.41□□□□□ -0.42
APOBEC3C-202ENST00000428892 CLUL1Q15846 466 aa12.41□□□□□ -0.42
APOBEC3C-202ENST00000428892 WWC2Q6AWC2 1192 aa12.41□□□□□ -0.42
APOBEC3C-202ENST00000428892 ADHFE1Q8IWW8 467 aa12.41□□□□□ -0.42
APOBEC3C-202ENST00000428892 IL31RAQ8NI17 732 aa12.41□□□□□ -0.42
APOBEC3C-202ENST00000428892 ZNF274Q96GC6 653 aaPredicted RBP12.41□□□□□ -0.42
APOBEC3C-202ENST00000428892 C11orf84Q9BUA3 381 aaPredicted RBP12.41□□□□□ -0.42
APOBEC3C-202ENST00000428892 CCDC196A0A1B0GTZ2 297 aa12.4□□□□□ -0.42
APOBEC3C-202ENST00000428892 RGS20O76081 388 aa12.4□□□□□ -0.42
APOBEC3C-202ENST00000428892 HOXD8P13378 290 aaPredicted RBP12.4□□□□□ -0.42
APOBEC3C-202ENST00000428892 IFNAR1P17181 557 aa12.4□□□□□ -0.42
APOBEC3C-202ENST00000428892 HIC1Q14526 733 aa12.4□□□□□ -0.42
APOBEC3C-202ENST00000428892 PKN1Q16512 942 aa12.4□□□□□ -0.42
APOBEC3C-202ENST00000428892 PPP1R18Q6NYC8 613 aa12.4□□□□□ -0.42
APOBEC3C-202ENST00000428892 USP17L6PQ6QN14 398 aa12.4□□□□□ -0.42
APOBEC3C-202ENST00000428892 VSIG10LQ86VR7 867 aa12.4□□□□□ -0.42
APOBEC3C-202ENST00000428892 FCHSD1Q86WN1 690 aa12.4□□□□□ -0.42
APOBEC3C-202ENST00000428892 TEX2Q8IWB9 1127 aa12.4□□□□□ -0.42
APOBEC3C-202ENST00000428892 GPKOWQ92917 476 aaPredicted RBP eCLIP12.4□□□□□ -0.42
APOBEC3C-202ENST00000428892 PPP2R3CQ969Q6 453 aa12.4□□□□□ -0.42
APOBEC3C-202ENST00000428892 MFSD14AQ96MC6 490 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms