RNA–Protein interactions for RNA: ENST00000426246.2

USP42-203, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 2

Gene USP42, Length 3,611 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-203ENST00000426246 GMLQ99445 158 aa14.71□□□□□ -0.05
USP42-203ENST00000426246 IDI2Q9BXS1 227 aa14.71□□□□□ -0.05
USP42-203ENST00000426246 THAP9Q9H5L6 903 aa14.71□□□□□ -0.05
USP42-203ENST00000426246 PPIP5K2O43314 1243 aa14.71□□□□□ -0.06
USP42-203ENST00000426246 KIAA0754O94854 1291 aa14.71□□□□□ -0.06
USP42-203ENST00000426246 SEC24CP53992 1094 aa14.71□□□□□ -0.06
USP42-203ENST00000426246 IFFO1Q0D2I5 559 aa14.71□□□□□ -0.06
USP42-203ENST00000426246 LRRC31Q6UY01 552 aa14.71□□□□□ -0.06
USP42-203ENST00000426246 TRAPPC11Q7Z392 1133 aa14.71□□□□□ -0.06
USP42-203ENST00000426246 RTKN2Q8IZC4 609 aa14.71□□□□□ -0.06
USP42-203ENST00000426246 U2AF1L4Q8WU68 220 aaKnown RBP14.71□□□□□ -0.06
USP42-203ENST00000426246 MYH4Q9Y623 1939 aa14.7□□□□□ -0.06
USP42-203ENST00000426246 RHOBTB3O94955 611 aa14.7□□□□□ -0.06
USP42-203ENST00000426246 SHMT1P34896 483 aa14.7□□□□□ -0.06
USP42-203ENST00000426246 CCDC174Q6PII3 467 aa14.7□□□□□ -0.06
USP42-203ENST00000426246 DDX47Q9H0S4 455 aaKnown RBP14.7□□□□□ -0.06
USP42-203ENST00000426246 FAM153BP0C7A2 387 aa14.7□□□□□ -0.06
USP42-203ENST00000426246 KRT13P13646 458 aa14.7□□□□□ -0.06
USP42-203ENST00000426246 SLC9A1P19634 815 aa14.7□□□□□ -0.06
USP42-203ENST00000426246 KLRC1P26715 233 aa14.7□□□□□ -0.06
USP42-203ENST00000426246 FAM153CQ494X1 144 aa14.7□□□□□ -0.06
USP42-203ENST00000426246 TTC31Q49AM3 519 aaPredicted RBP14.7□□□□□ -0.06
USP42-203ENST00000426246 CAPS2Q9BXY5 557 aa14.7□□□□□ -0.06
USP42-203ENST00000426246 FAM153AQ9UHL3 310 aa14.7□□□□□ -0.06
USP42-203ENST00000426246 TGFB2P61812 414 aa14.7□□□□□ -0.06
USP42-203ENST00000426246 GRB10Q13322 594 aa14.7□□□□□ -0.06
USP42-203ENST00000426246 SRLQ86TD4 932 aa14.7□□□□□ -0.06
USP42-203ENST00000426246 C4orf32Q8N8J7 132 aa14.7□□□□□ -0.06
USP42-203ENST00000426246 IVLP07476 585 aa14.69□□□□□ -0.06
USP42-203ENST00000426246 ECM1Q16610 540 aa14.69□□□□□ -0.06
USP42-203ENST00000426246 FAM83BQ5T0W9 1011 aa14.69□□□□□ -0.06
USP42-203ENST00000426246 MTFR1LQ9H019 292 aa14.69□□□□□ -0.06
USP42-203ENST00000426246 ZNF277Q9NRM2 450 aaPredicted RBP14.69□□□□□ -0.06
USP42-203ENST00000426246 KBTBD4Q9NVX7 518 aa14.69□□□□□ -0.06
USP42-203ENST00000426246 RGL1Q9NZL6 768 aa14.69□□□□□ -0.06
USP42-203ENST00000426246 MYO3BQ8WXR4 1341 aa14.69□□□□□ -0.06
USP42-203ENST00000426246 PALM3A6NDB9 673 aaPredicted RBP14.69□□□□□ -0.06
USP42-203ENST00000426246 NPM3O75607 178 aaKnown RBP14.69□□□□□ -0.06
USP42-203ENST00000426246 GJC1P36383 396 aa14.69□□□□□ -0.06
USP42-203ENST00000426246 ZNF211Q13398 564 aaPredicted RBP14.69□□□□□ -0.06
USP42-203ENST00000426246 CCDC84Q86UT8 332 aaPredicted RBP14.69□□□□□ -0.06
USP42-203ENST00000426246 ADGRF4Q8IZF3 695 aa14.69□□□□□ -0.06
USP42-203ENST00000426246 TSEN2Q8NCE0 465 aaKnown RBP14.69□□□□□ -0.06
USP42-203ENST00000426246 NUP58Q9BVL2 599 aa14.69□□□□□ -0.06
USP42-203ENST00000426246 HOMER2Q9NSB8 354 aa14.69□□□□□ -0.06
USP42-203ENST00000426246 RSPH10B2B2RC85 870 aa14.68□□□□□ -0.06
USP42-203ENST00000426246 MAP2K7O14733 419 aa14.68□□□□□ -0.06
USP42-203ENST00000426246 ZBTB39O15060 712 aa14.68□□□□□ -0.06
USP42-203ENST00000426246 GFPT2O94808 682 aa14.68□□□□□ -0.06
USP42-203ENST00000426246 VIL1P09327 827 aaKnown RBP14.68□□□□□ -0.06
USP42-203ENST00000426246 RSPH10BP0C881 870 aa14.68□□□□□ -0.06
USP42-203ENST00000426246 MAN2A1Q16706 1144 aa14.68□□□□□ -0.06
USP42-203ENST00000426246 FBXW10Q5XX13 1052 aa14.68□□□□□ -0.06
USP42-203ENST00000426246 CCNI2Q6ZMN8 369 aaPredicted RBP14.68□□□□□ -0.06
USP42-203ENST00000426246 SYCP3Q8IZU3 236 aa14.68□□□□□ -0.06
USP42-203ENST00000426246 CYP2W1Q8TAV3 490 aa14.68□□□□□ -0.06
USP42-203ENST00000426246 DNAJC17Q9NVM6 304 aaKnown RBP14.68□□□□□ -0.06
USP42-203ENST00000426246 SERPINB13Q9UIV8 391 aa14.68□□□□□ -0.06
USP42-203ENST00000426246 A0A087X0T9 212 aa14.68□□□□□ -0.06
USP42-203ENST00000426246 DDTLA6NHG4 134 aaPredicted RBP14.68□□□□□ -0.06
USP42-203ENST00000426246 E7EVH7 732 aa14.68□□□□□ -0.06
USP42-203ENST00000426246 FAM228BP0C875 321 aa14.68□□□□□ -0.06
USP42-203ENST00000426246 SSR1P43307 286 aaKnown RBP14.68□□□□□ -0.06
USP42-203ENST00000426246 COASYQ13057 564 aa14.68□□□□□ -0.06
USP42-203ENST00000426246 CTTNQ14247 550 aaKnown RBP14.68□□□□□ -0.06
USP42-203ENST00000426246 ASIC2Q16515 512 aa14.68□□□□□ -0.06
USP42-203ENST00000426246 SNX12Q9UMY4 172 aa14.68□□□□□ -0.06
USP42-203ENST00000426246 JRKLQ9Y4A0 524 aa14.68□□□□□ -0.06
USP42-203ENST00000426246 ATP8B1O43520 1251 aa14.68□□□□□ -0.06
USP42-203ENST00000426246 FGFR1OPO95684 399 aaKnown RBP14.68□□□□□ -0.06
USP42-203ENST00000426246 PSMC6P62333 389 aa14.68□□□□□ -0.06
USP42-203ENST00000426246 KCNA1Q09470 495 aa14.68□□□□□ -0.06
USP42-203ENST00000426246 NNTQ13423 1086 aa14.68□□□□□ -0.06
USP42-203ENST00000426246 CFAP221Q4G0U5 840 aa14.68□□□□□ -0.06
USP42-203ENST00000426246 BHMT2Q9H2M3 363 aa14.68□□□□□ -0.06
USP42-203ENST00000426246 PCIF1Q9H4Z3 704 aa14.68□□□□□ -0.06
USP42-203ENST00000426246 ATF5Q9Y2D1 282 aaPredicted RBP14.68□□□□□ -0.06
USP42-203ENST00000426246 COL2A1P02458 1487 aaPredicted RBP14.68□□□□□ -0.06
USP42-203ENST00000426246 GLI1P08151 1106 aa14.67□□□□□ -0.06
USP42-203ENST00000426246 CT47A1Q5JQC4 288 aaPredicted RBP14.67□□□□□ -0.06
USP42-203ENST00000426246 DAAM2Q86T65 1068 aa14.67□□□□□ -0.06
USP42-203ENST00000426246 VPS33BQ9H267 617 aa14.67□□□□□ -0.06
USP42-203ENST00000426246 EMILIN3Q9NT22 766 aa14.67□□□□□ -0.06
USP42-203ENST00000426246 ATRNL1Q5VV63 1379 aa14.67□□□□□ -0.06
USP42-203ENST00000426246 TBCAO75347 108 aaKnown RBP14.67□□□□□ -0.06
USP42-203ENST00000426246 PLA2G4BP0C869 781 aa14.67□□□□□ -0.06
USP42-203ENST00000426246 MRPL12P52815 198 aaKnown RBP14.67□□□□□ -0.06
USP42-203ENST00000426246 MSANTD4Q8NCY6 345 aa14.67□□□□□ -0.06
USP42-203ENST00000426246 MRRFQ96E11 262 aaKnown RBP14.67□□□□□ -0.06
USP42-203ENST00000426246 PRMT6Q96LA8 375 aaPredicted RBP14.67□□□□□ -0.06
USP42-203ENST00000426246 MMTAG2Q9BU76 263 aaKnown RBP14.67□□□□□ -0.06
USP42-203ENST00000426246 MTMR4Q9NYA4 1195 aa14.67□□□□□ -0.06
USP42-203ENST00000426246 ARFGEF1Q9Y6D6 1849 aa14.67□□□□□ -0.06
USP42-203ENST00000426246 CETN3O15182 167 aa14.67□□□□□ -0.06
USP42-203ENST00000426246 SYF2O95926 243 aaKnown RBP14.67□□□□□ -0.06
USP42-203ENST00000426246 SLCO1A2P46721 670 aa14.67□□□□□ -0.06
USP42-203ENST00000426246 VPS41P49754 854 aa14.67□□□□□ -0.06
USP42-203ENST00000426246 AMPD2Q01433 879 aa14.67□□□□□ -0.06
USP42-203ENST00000426246 DHX9Q08211 1270 aaKnown RBP14.67□□□□□ -0.06
USP42-203ENST00000426246 MIIPQ5JXC2 388 aa14.67□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms