RNA–Protein interactions for RNA: ENST00000426180.1

HERPUD2-204, Transcript of HERPUD family member 2, humanhuman

TSL 5

Gene HERPUD2, Length 757 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD2-204ENST00000426180 STX6O43752 255 aa6.5□□□□□ -1.37
HERPUD2-204ENST00000426180 SLC37A4O43826 429 aa6.5□□□□□ -1.37
HERPUD2-204ENST00000426180 ATP9AO75110 1047 aa6.5□□□□□ -1.37
HERPUD2-204ENST00000426180 ATP2B1P20020 1258 aa6.5□□□□□ -1.37
HERPUD2-204ENST00000426180 LORP23490 312 aaPredicted RBP6.5□□□□□ -1.37
HERPUD2-204ENST00000426180 CNGA1P29973 690 aa6.5□□□□□ -1.37
HERPUD2-204ENST00000426180 ANP32AP39687 249 aaKnown RBP6.5□□□□□ -1.37
HERPUD2-204ENST00000426180 TOB1P50616 345 aaPredicted RBP6.5□□□□□ -1.37
HERPUD2-204ENST00000426180 RESTQ13127 1097 aa6.5□□□□□ -1.37
HERPUD2-204ENST00000426180 ITGB3BPQ13352 177 aaPredicted RBP6.5□□□□□ -1.37
HERPUD2-204ENST00000426180 NNTQ13423 1086 aa6.5□□□□□ -1.37
HERPUD2-204ENST00000426180 PWP2Q15269 919 aaKnown RBP6.5□□□□□ -1.37
HERPUD2-204ENST00000426180 SAFBQ15424 915 aaKnown RBP eCLIP6.5□□□□□ -1.37
HERPUD2-204ENST00000426180 LETM2Q2VYF4 491 aa6.5□□□□□ -1.37
HERPUD2-204ENST00000426180 CCDC144BQ3MJ40 725 aa6.5□□□□□ -1.37
HERPUD2-204ENST00000426180 DESI1Q6ICB0 168 aa6.5□□□□□ -1.37
HERPUD2-204ENST00000426180 FAM173BQ6P4H8 233 aa6.5□□□□□ -1.37
HERPUD2-204ENST00000426180 CCDC62Q6P9F0 684 aa6.5□□□□□ -1.37
HERPUD2-204ENST00000426180 NOSTRINQ8IVI9 506 aa6.5□□□□□ -1.37
HERPUD2-204ENST00000426180 TEX2Q8IWB9 1127 aa6.5□□□□□ -1.37
HERPUD2-204ENST00000426180 GJA10Q969M2 543 aa6.5□□□□□ -1.37
HERPUD2-204ENST00000426180 CHAMP1Q96JM3 812 aa6.5□□□□□ -1.37
HERPUD2-204ENST00000426180 MBOAT7Q96N66 472 aa6.5□□□□□ -1.37
HERPUD2-204ENST00000426180 INPP4AQ96PE3 977 aaPredicted RBP6.5□□□□□ -1.37
HERPUD2-204ENST00000426180 MXRA8Q9BRK3 442 aa6.5□□□□□ -1.37
HERPUD2-204ENST00000426180 XRN2Q9H0D6 950 aaKnown RBP eCLIP6.5□□□□□ -1.37
HERPUD2-204ENST00000426180 FOXP1Q9H334 677 aaPredicted RBP6.5□□□□□ -1.37
HERPUD2-204ENST00000426180 ABHD16BQ9H3Z7 469 aa6.5□□□□□ -1.37
HERPUD2-204ENST00000426180 BRMS1Q9HCU9 246 aa6.5□□□□□ -1.37
HERPUD2-204ENST00000426180 VTA1Q9NP79 307 aa6.5□□□□□ -1.37
HERPUD2-204ENST00000426180 CNPY2Q9Y2B0 182 aa6.5□□□□□ -1.37
HERPUD2-204ENST00000426180 KIF3AQ9Y496 699 aa6.5□□□□□ -1.37
HERPUD2-204ENST00000426180 MYH6P13533 1939 aa6.5□□□□□ -1.37
HERPUD2-204ENST00000426180 ZNFX1Q9P2E3 1918 aaKnown RBP6.49□□□□□ -1.37
HERPUD2-204ENST00000426180 CYP3A7-CYP3A51PA0A087WV96 503 aa6.49□□□□□ -1.37
HERPUD2-204ENST00000426180 MYADML2A6NDP7 307 aa6.49□□□□□ -1.37
HERPUD2-204ENST00000426180 SPATA31C2B4DYI2 1134 aa6.49□□□□□ -1.37
HERPUD2-204ENST00000426180 CTAGE5O15320 804 aa6.49□□□□□ -1.37
HERPUD2-204ENST00000426180 MSH4O15457 936 aa6.49□□□□□ -1.37
HERPUD2-204ENST00000426180 SEPT4O43236 478 aa6.49□□□□□ -1.37
HERPUD2-204ENST00000426180 TXNP10599 105 aaKnown RBP6.49□□□□□ -1.37
HERPUD2-204ENST00000426180 PDCP20941 246 aa6.49□□□□□ -1.37
HERPUD2-204ENST00000426180 UBA1P22314 1058 aaKnown RBP6.49□□□□□ -1.37
HERPUD2-204ENST00000426180 CYP3A7P24462 503 aa6.49□□□□□ -1.37
HERPUD2-204ENST00000426180 CIITAP33076 1130 aa6.49□□□□□ -1.37
HERPUD2-204ENST00000426180 ZNF76P36508 570 aa6.49□□□□□ -1.37
HERPUD2-204ENST00000426180 USP11P51784 963 aa6.49□□□□□ -1.37
HERPUD2-204ENST00000426180 TNFAIP2Q03169 654 aa6.49□□□□□ -1.37
HERPUD2-204ENST00000426180 GNL2Q13823 731 aaKnown RBP6.49□□□□□ -1.37
HERPUD2-204ENST00000426180 ZNF174Q15697 407 aa6.49□□□□□ -1.37
HERPUD2-204ENST00000426180 CEP55Q53EZ4 464 aa6.49□□□□□ -1.37
HERPUD2-204ENST00000426180 PRR16Q569H4 304 aa6.49□□□□□ -1.37
HERPUD2-204ENST00000426180 MCTP2Q6DN12 878 aa6.49□□□□□ -1.37
HERPUD2-204ENST00000426180 IQSEC1Q6DN90 963 aa6.49□□□□□ -1.37
HERPUD2-204ENST00000426180 MRPL14Q6P1L8 145 aaKnown RBP6.49□□□□□ -1.37
HERPUD2-204ENST00000426180 XRRA1Q6P2D8 792 aa6.49□□□□□ -1.37
HERPUD2-204ENST00000426180 NEK8Q86SG6 692 aa6.49□□□□□ -1.37
HERPUD2-204ENST00000426180 PLA2G4DQ86XP0 818 aa6.49□□□□□ -1.37
HERPUD2-204ENST00000426180 FTOQ9C0B1 505 aaKnown RBP eCLIP6.49□□□□□ -1.37
HERPUD2-204ENST00000426180 RNF208Q9H0X6 261 aa6.49□□□□□ -1.37
HERPUD2-204ENST00000426180 EHMT1Q9H9B1 1298 aa6.49□□□□□ -1.37
HERPUD2-204ENST00000426180 JADE2Q9NQC1 790 aa6.49□□□□□ -1.37
HERPUD2-204ENST00000426180 PAK6Q9NQU5 681 aaPredicted RBP6.49□□□□□ -1.37
HERPUD2-204ENST00000426180 NRBP1Q9UHY1 535 aa6.49□□□□□ -1.37
HERPUD2-204ENST00000426180 DDX41Q9UJV9 622 aaKnown RBP6.49□□□□□ -1.37
HERPUD2-204ENST00000426180 FAM184BQ9ULE4 1060 aa6.49□□□□□ -1.37
HERPUD2-204ENST00000426180 GNEQ9Y223 722 aaKnown RBP6.49□□□□□ -1.37
HERPUD2-204ENST00000426180 MRVI1Q9Y6F6 885 aa6.49□□□□□ -1.37
HERPUD2-204ENST00000426180 PLXNA1Q9UIW2 1896 aa6.49□□□□□ -1.37
HERPUD2-204ENST00000426180 B4DLN1 442 aa6.48□□□□□ -1.37
HERPUD2-204ENST00000426180 DHX15O43143 795 aaKnown RBP6.48□□□□□ -1.37
HERPUD2-204ENST00000426180 DYNC1LI2O43237 492 aaPredicted RBP6.48□□□□□ -1.37
HERPUD2-204ENST00000426180 CCNT1O60563 726 aaKnown RBP6.48□□□□□ -1.37
HERPUD2-204ENST00000426180 STAM2O75886 525 aa6.48□□□□□ -1.37
HERPUD2-204ENST00000426180 BRD1O95696 1058 aa6.48□□□□□ -1.37
HERPUD2-204ENST00000426180 GGPS1O95749 300 aa6.48□□□□□ -1.37
HERPUD2-204ENST00000426180 PGK1P00558 417 aa6.48□□□□□ -1.37
HERPUD2-204ENST00000426180 ZSCAN22P10073 491 aaPredicted RBP6.48□□□□□ -1.37
HERPUD2-204ENST00000426180 AKR1A1P14550 325 aa6.48□□□□□ -1.37
HERPUD2-204ENST00000426180 KCNA2P16389 499 aa6.48□□□□□ -1.37
HERPUD2-204ENST00000426180 CTHP32929 405 aa6.48□□□□□ -1.37
HERPUD2-204ENST00000426180 ICAM3P32942 547 aa6.48□□□□□ -1.37
HERPUD2-204ENST00000426180 MCM7P33993 719 aa6.48□□□□□ -1.37
HERPUD2-204ENST00000426180 WDR4P57081 412 aaKnown RBP6.48□□□□□ -1.37
HERPUD2-204ENST00000426180 BEX3Q00994 111 aa6.48□□□□□ -1.37
HERPUD2-204ENST00000426180 ARHGAP1Q07960 439 aa6.48□□□□□ -1.37
HERPUD2-204ENST00000426180 MTMR1Q13613 665 aa6.48□□□□□ -1.37
HERPUD2-204ENST00000426180 FOXD4L6Q3SYB3 417 aaPredicted RBP6.48□□□□□ -1.37
HERPUD2-204ENST00000426180 Q4G0T1 1027 aa6.48□□□□□ -1.37
HERPUD2-204ENST00000426180 DUSP28Q4G0W2 176 aa6.48□□□□□ -1.37
HERPUD2-204ENST00000426180 TTC38Q5R3I4 469 aa6.48□□□□□ -1.37
HERPUD2-204ENST00000426180 MYSM1Q5VVJ2 828 aa6.48□□□□□ -1.37
HERPUD2-204ENST00000426180 FOXD4L3Q6VB84 417 aaPredicted RBP6.48□□□□□ -1.37
HERPUD2-204ENST00000426180 CYFIP1Q7L576 1253 aa6.48□□□□□ -1.37
HERPUD2-204ENST00000426180 NIPA1Q7RTP0 329 aa6.48□□□□□ -1.37
HERPUD2-204ENST00000426180 NLRX1Q86UT6 975 aa6.48□□□□□ -1.37
HERPUD2-204ENST00000426180 C4orf32Q8N8J7 132 aa6.48□□□□□ -1.37
HERPUD2-204ENST00000426180 ETNPPLQ8TBG4 499 aa6.48□□□□□ -1.37
HERPUD2-204ENST00000426180 FAM174AQ8TBP5 190 aa6.48□□□□□ -1.37
HERPUD2-204ENST00000426180 SCFD2Q8WU76 684 aa6.48□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms