RNA–Protein interactions for RNA: ENST00000425239.5

ATG4B-209, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 807 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-209ENST00000425239 PPFIA1Q13136 1202 aa17.21■□□□□ 0.35
ATG4B-209ENST00000425239 UBE2SQ16763 222 aa17.21■□□□□ 0.35
ATG4B-209ENST00000425239 PUS10Q3MIT2 529 aaKnown RBP17.21■□□□□ 0.35
ATG4B-209ENST00000425239 FIBCD1Q8N539 461 aa17.21■□□□□ 0.35
ATG4B-209ENST00000425239 CYP2W1Q8TAV3 490 aa17.21■□□□□ 0.35
ATG4B-209ENST00000425239 CDHR1Q96JP9 859 aa17.21■□□□□ 0.35
ATG4B-209ENST00000425239 TMEM87BQ96K49 555 aa17.21■□□□□ 0.35
ATG4B-209ENST00000425239 NSUN3Q9H649 340 aaKnown RBP17.21■□□□□ 0.35
ATG4B-209ENST00000425239 PCDHA6Q9UN73 950 aa17.21■□□□□ 0.35
ATG4B-209ENST00000425239 PCDHA8Q9Y5H6 950 aa17.21■□□□□ 0.35
ATG4B-209ENST00000425239 INSRRP14616 1297 aa17.2■□□□□ 0.34
ATG4B-209ENST00000425239 GNAQP50148 359 aa17.2■□□□□ 0.34
ATG4B-209ENST00000425239 DLX2Q07687 328 aaPredicted RBP17.2■□□□□ 0.34
ATG4B-209ENST00000425239 FUT2Q10981 343 aa17.2■□□□□ 0.34
ATG4B-209ENST00000425239 TYW1BQ6NUM6 668 aa17.2■□□□□ 0.34
ATG4B-209ENST00000425239 TMTC3Q6ZXV5 915 aa17.2■□□□□ 0.34
ATG4B-209ENST00000425239 SGMS1Q86VZ5 419 aa17.2■□□□□ 0.34
ATG4B-209ENST00000425239 FANCBQ8NB91 859 aa17.2■□□□□ 0.34
ATG4B-209ENST00000425239 SMARCAD1Q9H4L7 1026 aa17.2■□□□□ 0.34
ATG4B-209ENST00000425239 SEC63Q9UGP8 760 aaKnown RBP17.2■□□□□ 0.34
ATG4B-209ENST00000425239 TUBE1Q9UJT0 475 aa17.2■□□□□ 0.34
ATG4B-209ENST00000425239 MARK3P27448 753 aa17.19■□□□□ 0.34
ATG4B-209ENST00000425239 ZP2Q05996 745 aa17.19■□□□□ 0.34
ATG4B-209ENST00000425239 HYAL1Q12794 435 aa17.19■□□□□ 0.34
ATG4B-209ENST00000425239 MTMR1Q13613 665 aa17.19■□□□□ 0.34
ATG4B-209ENST00000425239 CASC1Q6TDU7 716 aa17.19■□□□□ 0.34
ATG4B-209ENST00000425239 RAB11FIP4Q86YS3 637 aa17.19■□□□□ 0.34
ATG4B-209ENST00000425239 KCNH7Q9NS40 1196 aa17.19■□□□□ 0.34
ATG4B-209ENST00000425239 CDY2AQ9Y6F7 541 aa17.19■□□□□ 0.34
ATG4B-209ENST00000425239 SQORQ9Y6N5 450 aa17.19■□□□□ 0.34
ATG4B-209ENST00000425239 LOXHD1Q8IVV2 1947 aa17.19■□□□□ 0.34
ATG4B-209ENST00000425239 ADGRA3Q8IWK6 1321 aa17.19■□□□□ 0.34
ATG4B-209ENST00000425239 CCDC69A6NI79 296 aa17.18■□□□□ 0.34
ATG4B-209ENST00000425239 PRR33A8MZF0 331 aa17.18■□□□□ 0.34
ATG4B-209ENST00000425239 ATG7O95352 703 aa17.18■□□□□ 0.34
ATG4B-209ENST00000425239 MRPS6P82932 125 aaKnown RBP17.18■□□□□ 0.34
ATG4B-209ENST00000425239 CREB3L3Q68CJ9 461 aa17.18■□□□□ 0.34
ATG4B-209ENST00000425239 TSHZ1Q6ZSZ6 1077 aa17.18■□□□□ 0.34
ATG4B-209ENST00000425239 CCDC82Q8N4S0 544 aa17.18■□□□□ 0.34
ATG4B-209ENST00000425239 MXRA8Q9BRK3 442 aa17.18■□□□□ 0.34
ATG4B-209ENST00000425239 LRRC2Q9BYS8 371 aa17.18■□□□□ 0.34
ATG4B-209ENST00000425239 LMAN2LQ9H0V9 348 aa17.18■□□□□ 0.34
ATG4B-209ENST00000425239 PKD2L1Q9P0L9 805 aa17.18■□□□□ 0.34
ATG4B-209ENST00000425239 IGKV6D-21A0A0A0MT36 114 aa17.17■□□□□ 0.34
ATG4B-209ENST00000425239 RRN3P2A6NIE6 340 aa17.17■□□□□ 0.34
ATG4B-209ENST00000425239 CALM1P0DP23 149 aa17.17■□□□□ 0.34
ATG4B-209ENST00000425239 CALM2P0DP24 149 aa17.17■□□□□ 0.34
ATG4B-209ENST00000425239 CALM3P0DP25 149 aa17.17■□□□□ 0.34
ATG4B-209ENST00000425239 ARP10275 920 aa17.17■□□□□ 0.34
ATG4B-209ENST00000425239 DNAJB1P25685 340 aa17.17■□□□□ 0.34
ATG4B-209ENST00000425239 CD52P31358 61 aa17.17■□□□□ 0.34
ATG4B-209ENST00000425239 CTNNB1P35222 781 aa17.17■□□□□ 0.34
ATG4B-209ENST00000425239 GTF2F1P35269 517 aaKnown RBP eCLIP17.17■□□□□ 0.342e-8■■■■■ 34.1
ATG4B-209ENST00000425239 PLCB4Q15147 1175 aa17.17■□□□□ 0.34
ATG4B-209ENST00000425239 GLG1Q92896 1179 aa17.17■□□□□ 0.34
ATG4B-209ENST00000425239 ESYT1Q9BSJ8 1104 aa17.17■□□□□ 0.34
ATG4B-209ENST00000425239 PRKAG3Q9UGI9 489 aa17.17■□□□□ 0.34
ATG4B-209ENST00000425239 PLAGL2Q9UPG8 496 aa17.17■□□□□ 0.34
ATG4B-209ENST00000425239 HCN4Q9Y3Q4 1203 aa17.17■□□□□ 0.34
ATG4B-209ENST00000425239 EXOSC10Q01780 885 aaKnown RBP17.16■□□□□ 0.34
ATG4B-209ENST00000425239 ITGB3BPQ13352 177 aaPredicted RBP17.16■□□□□ 0.34
ATG4B-209ENST00000425239 WWC2Q6AWC2 1192 aa17.16■□□□□ 0.34
ATG4B-209ENST00000425239 NFXL1Q6ZNB6 911 aa17.16■□□□□ 0.34
ATG4B-209ENST00000425239 PLPPR4Q7Z2D5 763 aa17.16■□□□□ 0.34
ATG4B-209ENST00000425239 RSPH3Q86UC2 560 aa17.16■□□□□ 0.34
ATG4B-209ENST00000425239 TRAPPC12Q8WVT3 735 aa17.16■□□□□ 0.34
ATG4B-209ENST00000425239 C11orf84Q9BUA3 381 aaPredicted RBP17.16■□□□□ 0.34
ATG4B-209ENST00000425239 PLVAPQ9BX97 442 aa17.16■□□□□ 0.34
ATG4B-209ENST00000425239 TMX1Q9H3N1 280 aa17.16■□□□□ 0.34
ATG4B-209ENST00000425239 JPH1Q9HDC5 661 aaPredicted RBP17.16■□□□□ 0.34
ATG4B-209ENST00000425239 ALG13Q9NP73 1137 aaKnown RBP17.16■□□□□ 0.34
ATG4B-209ENST00000425239 CLDND1Q9NY35 253 aa17.16■□□□□ 0.34
ATG4B-209ENST00000425239 SLC9A2Q9UBY0 812 aa17.16■□□□□ 0.34
ATG4B-209ENST00000425239 PADI3Q9ULW8 664 aa17.16■□□□□ 0.34
ATG4B-209ENST00000425239 RWDD3Q9Y3V2 267 aa17.16■□□□□ 0.34
ATG4B-209ENST00000425239 PCDHA2Q9Y5H9 948 aa17.16■□□□□ 0.34
ATG4B-209ENST00000425239 SLC12A7Q9Y666 1083 aa17.16■□□□□ 0.34
ATG4B-209ENST00000425239 NFASCO94856 1347 aa17.16■□□□□ 0.34
ATG4B-209ENST00000425239 MUC6Q6W4X9 2439 aa17.16■□□□□ 0.34
ATG4B-209ENST00000425239 KIAA1671Q9BY89 1806 aa17.15■□□□□ 0.34
ATG4B-209ENST00000425239 SPDYE3A6NKU9 549 aa17.15■□□□□ 0.34
ATG4B-209ENST00000425239 MEIS1O00470 390 aa17.15■□□□□ 0.34
ATG4B-209ENST00000425239 NCK2O43639 380 aa17.15■□□□□ 0.34
ATG4B-209ENST00000425239 MMP1P03956 469 aa17.15■□□□□ 0.34
ATG4B-209ENST00000425239 ALADP13716 330 aa17.15■□□□□ 0.34
ATG4B-209ENST00000425239 SSTR3P32745 418 aaPredicted RBP17.15■□□□□ 0.34
ATG4B-209ENST00000425239 CLK2P49760 499 aaKnown RBP17.15■□□□□ 0.34
ATG4B-209ENST00000425239 ACTR2P61160 394 aa17.15■□□□□ 0.34
ATG4B-209ENST00000425239 IGBP1P78318 339 aa17.15■□□□□ 0.34
ATG4B-209ENST00000425239 ADAM15Q13444 863 aa17.15■□□□□ 0.34
ATG4B-209ENST00000425239 BTG3Q14201 252 aaPredicted RBP17.15■□□□□ 0.34
ATG4B-209ENST00000425239 SMAD2Q15796 467 aaKnown RBP17.15■□□□□ 0.34
ATG4B-209ENST00000425239 ADHFE1Q8IWW8 467 aa17.15■□□□□ 0.34
ATG4B-209ENST00000425239 SPPL3Q8TCT6 385 aa17.15■□□□□ 0.34
ATG4B-209ENST00000425239 P2RX5Q93086 422 aa17.15■□□□□ 0.34
ATG4B-209ENST00000425239 RIC8AQ9NPQ8 531 aa17.15■□□□□ 0.34
ATG4B-209ENST00000425239 FAM217BQ9NTX9 383 aaPredicted RBP17.15■□□□□ 0.34
ATG4B-209ENST00000425239 BRPF3Q9ULD4 1205 aa17.15■□□□□ 0.34
ATG4B-209ENST00000425239 MRPL42Q9Y6G3 142 aaKnown RBP17.15■□□□□ 0.34
ATG4B-209ENST00000425239 CNTNAP5Q8WYK1 1306 aa17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms