RNA–Protein interactions for RNA: ENST00000422748.5

CALD1-205, Transcript of caldesmon 1, humanhuman

TSL 2 BASIC

Gene CALD1, Length 2,665 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-205ENST00000422748 WDR35Q9P2L0 1181 aa14.39□□□□□ -0.11
CALD1-205ENST00000422748 AMACRQ9UHK6 382 aa14.39□□□□□ -0.11
CALD1-205ENST00000422748 ZMYND8Q9ULU4 1186 aaPredicted RBP14.39□□□□□ -0.11
CALD1-205ENST00000422748 AKAP11Q9UKA4 1901 aa14.39□□□□□ -0.11
CALD1-205ENST00000422748 PLEKHA8P1O95397 391 aa14.39□□□□□ -0.11
CALD1-205ENST00000422748 PYGBP11216 843 aa14.39□□□□□ -0.11
CALD1-205ENST00000422748 LONP1P36776 959 aaKnown RBP14.39□□□□□ -0.11
CALD1-205ENST00000422748 MRPS35P82673 323 aaKnown RBP14.39□□□□□ -0.11
CALD1-205ENST00000422748 STK4Q13043 487 aa14.39□□□□□ -0.11
CALD1-205ENST00000422748 RPS6KA1Q15418 735 aa14.39□□□□□ -0.11
CALD1-205ENST00000422748 HOOK3Q86VS8 718 aa14.39□□□□□ -0.11
CALD1-205ENST00000422748 ANKRD27Q96NW4 1050 aa14.39□□□□□ -0.11
CALD1-205ENST00000422748 PAIP2Q9BPZ3 127 aaKnown RBP14.39□□□□□ -0.11
CALD1-205ENST00000422748 PACSIN1Q9BY11 444 aa14.39□□□□□ -0.11
CALD1-205ENST00000422748 NSRP1Q9H0G5 558 aaKnown RBP14.39□□□□□ -0.11
CALD1-205ENST00000422748 LRRC42Q9Y546 428 aa14.39□□□□□ -0.11
CALD1-205ENST00000422748 ROBO1Q9Y6N7 1651 aa14.39□□□□□ -0.11
CALD1-205ENST00000422748 TLDC2A0PJX2 215 aa14.38□□□□□ -0.11
CALD1-205ENST00000422748 ADAMTS3O15072 1205 aa14.38□□□□□ -0.11
CALD1-205ENST00000422748 SNRPA1P09661 255 aaKnown RBP14.38□□□□□ -0.11
CALD1-205ENST00000422748 GNAZP19086 355 aa14.38□□□□□ -0.11
CALD1-205ENST00000422748 CNGA1P29973 690 aa14.38□□□□□ -0.11
CALD1-205ENST00000422748 PCK1P35558 622 aa14.38□□□□□ -0.11
CALD1-205ENST00000422748 EIF3BP55884 814 aaKnown RBP14.38□□□□□ -0.11
CALD1-205ENST00000422748 GIGYF2Q6Y7W6 1299 aaKnown RBP14.38□□□□□ -0.11
CALD1-205ENST00000422748 LMNTD2Q8IXW0 634 aa14.38□□□□□ -0.11
CALD1-205ENST00000422748 LRRC15Q8TF66 581 aa14.38□□□□□ -0.11
CALD1-205ENST00000422748 TSPAN18Q96SJ8 248 aa14.38□□□□□ -0.11
CALD1-205ENST00000422748 GOLPH3Q9H4A6 298 aa14.38□□□□□ -0.11
CALD1-205ENST00000422748 TCRBV5S4A2TA0A5A2 114 aa14.38□□□□□ -0.11
CALD1-205ENST00000422748 SMIM23A6NLE4 172 aa14.38□□□□□ -0.11
CALD1-205ENST00000422748 TTI1O43156 1089 aa14.38□□□□□ -0.11
CALD1-205ENST00000422748 PRPF3O43395 683 aaKnown RBP14.38□□□□□ -0.11
CALD1-205ENST00000422748 OAS1P00973 400 aaKnown RBP14.38□□□□□ -0.11
CALD1-205ENST00000422748 FCER1AP12319 257 aa14.38□□□□□ -0.11
CALD1-205ENST00000422748 IFI35P80217 286 aaPredicted RBP14.38□□□□□ -0.11
CALD1-205ENST00000422748 PDE4DQ08499 809 aa14.38□□□□□ -0.11
CALD1-205ENST00000422748 FUT2Q10981 343 aa14.38□□□□□ -0.11
CALD1-205ENST00000422748 USP4Q13107 963 aa14.38□□□□□ -0.11
CALD1-205ENST00000422748 PLS1Q14651 629 aa14.38□□□□□ -0.11
CALD1-205ENST00000422748 CCDC57Q2TAC2 916 aa14.38□□□□□ -0.11
CALD1-205ENST00000422748 CCDC38Q502W7 563 aa14.38□□□□□ -0.11
CALD1-205ENST00000422748 ASRGL1Q7L266 308 aa14.38□□□□□ -0.11
CALD1-205ENST00000422748 IFT74Q96LB3 600 aa14.38□□□□□ -0.11
CALD1-205ENST00000422748 TRIM4Q9C037 500 aa14.38□□□□□ -0.11
CALD1-205ENST00000422748 NLRC4Q9NPP4 1024 aa14.38□□□□□ -0.11
CALD1-205ENST00000422748 USP15Q9Y4E8 981 aaPredicted RBP14.38□□□□□ -0.11
CALD1-205ENST00000422748 TJP1Q07157 1748 aa14.38□□□□□ -0.11
CALD1-205ENST00000422748 AHDC1Q5TGY3 1603 aaPredicted RBP14.38□□□□□ -0.11
CALD1-205ENST00000422748 HIP1RO75146 1068 aa14.38□□□□□ -0.11
CALD1-205ENST00000422748 PCCAP05165 728 aaPredicted RBP14.38□□□□□ -0.11
CALD1-205ENST00000422748 ITGA4P13612 1032 aa14.38□□□□□ -0.11
CALD1-205ENST00000422748 SLC17A8Q8NDX2 589 aa14.38□□□□□ -0.11
CALD1-205ENST00000422748 DCAF5Q96JK2 942 aa14.38□□□□□ -0.11
CALD1-205ENST00000422748 CELF4Q9BZC1 486 aaKnown RBP14.38□□□□□ -0.11
CALD1-205ENST00000422748 CCDC134Q9H6E4 229 aa14.38□□□□□ -0.11
CALD1-205ENST00000422748 AZI2Q9H6S1 392 aa14.38□□□□□ -0.11
CALD1-205ENST00000422748 UTP3Q9NQZ2 479 aaKnown RBP eCLIP14.38□□□□□ -0.11
CALD1-205ENST00000422748 CHCHD3Q9NX63 227 aaKnown RBP14.38□□□□□ -0.11
CALD1-205ENST00000422748 MBD4O95243 580 aa14.37□□□□□ -0.11
CALD1-205ENST00000422748 RCAN1P53805 252 aa14.37□□□□□ -0.11
CALD1-205ENST00000422748 LBRQ14739 615 aaKnown RBP14.37□□□□□ -0.11
CALD1-205ENST00000422748 KIAA0753Q2KHM9 967 aa14.37□□□□□ -0.11
CALD1-205ENST00000422748 FAM81AQ8TBF8 368 aa14.37□□□□□ -0.11
CALD1-205ENST00000422748 ACTRT1Q8TDG2 376 aa14.37□□□□□ -0.11
CALD1-205ENST00000422748 RBM41Q96IZ5 413 aaKnown RBP14.37□□□□□ -0.11
CALD1-205ENST00000422748 RPS6KC1Q96S38 1066 aa14.37□□□□□ -0.11
CALD1-205ENST00000422748 TRIM31Q9BZY9 425 aa14.37□□□□□ -0.11
CALD1-205ENST00000422748 ARMT1Q9H993 441 aa14.37□□□□□ -0.11
CALD1-205ENST00000422748 KBTBD4Q9NVX7 518 aa14.37□□□□□ -0.11
CALD1-205ENST00000422748 NOC2LQ9Y3T9 749 aaKnown RBP14.37□□□□□ -0.11
CALD1-205ENST00000422748 TESPA1A2RU30 521 aaPredicted RBP14.37□□□□□ -0.11
CALD1-205ENST00000422748 CES2O00748 559 aa14.37□□□□□ -0.11
CALD1-205ENST00000422748 ABLIM1O14639 778 aa14.37□□□□□ -0.11
CALD1-205ENST00000422748 PRKAB2O43741 272 aa14.37□□□□□ -0.11
CALD1-205ENST00000422748 TLR2O60603 784 aa14.37□□□□□ -0.11
CALD1-205ENST00000422748 PPFIA2O75334 1257 aa14.37□□□□□ -0.11
CALD1-205ENST00000422748 FLOT1O75955 427 aa14.37□□□□□ -0.11
CALD1-205ENST00000422748 CUL3Q13618 768 aa14.37□□□□□ -0.11
CALD1-205ENST00000422748 PDIA5Q14554 519 aa14.37□□□□□ -0.11
CALD1-205ENST00000422748 SLC9C1Q4G0N8 1177 aa14.37□□□□□ -0.11
CALD1-205ENST00000422748 RNF220Q5VTB9 566 aa14.37□□□□□ -0.11
CALD1-205ENST00000422748 TMEM154Q6P9G4 183 aa14.37□□□□□ -0.11
CALD1-205ENST00000422748 CCDC84Q86UT8 332 aaPredicted RBP14.37□□□□□ -0.11
CALD1-205ENST00000422748 C4orf32Q8N8J7 132 aa14.37□□□□□ -0.11
CALD1-205ENST00000422748 ANKS1AQ92625 1134 aa14.37□□□□□ -0.11
CALD1-205ENST00000422748 EPB41L4BQ9H329 900 aa14.37□□□□□ -0.11
CALD1-205ENST00000422748 SEMA6BQ9H3T3 888 aa14.37□□□□□ -0.11
CALD1-205ENST00000422748 TIAM2Q8IVF5 1701 aa14.36□□□□□ -0.11
CALD1-205ENST00000422748 SHANK3Q9BYB0 1731 aa14.36□□□□□ -0.11
CALD1-205ENST00000422748 PGRMC1O00264 195 aaKnown RBP14.36□□□□□ -0.11
CALD1-205ENST00000422748 KRIT1O00522 736 aa14.36□□□□□ -0.11
CALD1-205ENST00000422748 WFS1O76024 890 aa14.36□□□□□ -0.11
CALD1-205ENST00000422748 ATP6V1C1P21283 382 aa14.36□□□□□ -0.11
CALD1-205ENST00000422748 PDE6CP51160 858 aa14.36□□□□□ -0.11
CALD1-205ENST00000422748 SGSM1Q2NKQ1 1148 aa14.36□□□□□ -0.11
CALD1-205ENST00000422748 TOM1L2Q6ZVM7 507 aa14.36□□□□□ -0.11
CALD1-205ENST00000422748 TBC1D5Q92609 795 aa14.36□□□□□ -0.11
CALD1-205ENST00000422748 HPS3Q969F9 1004 aa14.36□□□□□ -0.11
CALD1-205ENST00000422748 TXLNGYQ9BZA5 131 aa14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 83 ms