RNA–Protein interactions for RNA: ENST00000421968.6

UFD1-203, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 3

Gene UFD1, Length 670 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-203ENST00000421968 HSDL1Q3SXM5 330 aa14.02□□□□□ -0.17
UFD1-203ENST00000421968 TTBK2Q6IQ55 1244 aa14.02□□□□□ -0.17
UFD1-203ENST00000421968 KIAA1841Q6NSI8 718 aa14.02□□□□□ -0.17
UFD1-203ENST00000421968 LRSAM1Q6UWE0 723 aa14.02□□□□□ -0.17
UFD1-203ENST00000421968 LINC01599Q8WXQ3 324 aa14.02□□□□□ -0.17
UFD1-203ENST00000421968 SPATA33Q96N06 139 aa14.02□□□□□ -0.17
UFD1-203ENST00000421968 DDX24Q9GZR7 859 aaKnown RBP eCLIP14.02□□□□□ -0.171e-8■■■□□ 16.2
UFD1-203ENST00000421968 TUT1Q9H6E5 874 aaKnown RBP14.02□□□□□ -0.17
UFD1-203ENST00000421968 SETD4Q9NVD3 440 aa14.02□□□□□ -0.17
UFD1-203ENST00000421968 NOP58Q9Y2X3 529 aaKnown RBP14.02□□□□□ -0.17
UFD1-203ENST00000421968 ATP8B2P98198 1209 aa14.01□□□□□ -0.17
UFD1-203ENST00000421968 N4BP2L1Q5TBK1 243 aaPredicted RBP14.01□□□□□ -0.17
UFD1-203ENST00000421968 SYDE2Q5VT97 1194 aa14.01□□□□□ -0.17
UFD1-203ENST00000421968 MAML2Q8IZL2 1156 aaPredicted RBP14.01□□□□□ -0.17
UFD1-203ENST00000421968 C12orf76Q8N812 135 aaPredicted RBP14.01□□□□□ -0.17
UFD1-203ENST00000421968 MRS2Q9HD23 443 aa14.01□□□□□ -0.17
UFD1-203ENST00000421968 NGRNQ9NPE2 291 aaKnown RBP14.01□□□□□ -0.17
UFD1-203ENST00000421968 PUF60Q9UHX1 559 aaKnown RBP14.01□□□□□ -0.17
UFD1-203ENST00000421968 GMEB2Q9UKD1 530 aa14.01□□□□□ -0.17
UFD1-203ENST00000421968 STX8Q9UNK0 236 aa14.01□□□□□ -0.17
UFD1-203ENST00000421968 DYNC1LI1Q9Y6G9 523 aaKnown RBP14.01□□□□□ -0.17
UFD1-203ENST00000421968 PLIN4Q96Q06 1357 aa14□□□□□ -0.17
UFD1-203ENST00000421968 IBSPP21815 317 aaPredicted RBP14□□□□□ -0.17
UFD1-203ENST00000421968 TFAP4Q01664 338 aa14□□□□□ -0.17
UFD1-203ENST00000421968 ZNF528Q3MIS6 628 aa14□□□□□ -0.17
UFD1-203ENST00000421968 MYSM1Q5VVJ2 828 aa14□□□□□ -0.17
UFD1-203ENST00000421968 KANK3Q6NY19 840 aa14□□□□□ -0.17
UFD1-203ENST00000421968 OTOP3Q7RTS5 596 aa14□□□□□ -0.17
UFD1-203ENST00000421968 RTN4RL1Q86UN2 441 aaPredicted RBP14□□□□□ -0.17
UFD1-203ENST00000421968 NSUN6Q8TEA1 469 aaKnown RBP14□□□□□ -0.17
UFD1-203ENST00000421968 TAAR1Q96RJ0 339 aa14□□□□□ -0.17
UFD1-203ENST00000421968 PUS7LQ9H0K6 701 aaKnown RBP14□□□□□ -0.17
UFD1-203ENST00000421968 PNMA2Q9UL42 364 aa14□□□□□ -0.17
UFD1-203ENST00000421968 LRFN2Q9ULH4 789 aa14□□□□□ -0.17
UFD1-203ENST00000421968 PCDHGA2Q9Y5H1 932 aa14□□□□□ -0.17
UFD1-203ENST00000421968 HELZ2Q9BYK8 2649 aaKnown RBP14□□□□□ -0.17
UFD1-203ENST00000421968 KAT6AQ92794 2004 aa14□□□□□ -0.17
UFD1-203ENST00000421968 C1QTNF9BB2RNN3 333 aa13.99□□□□□ -0.17
UFD1-203ENST00000421968 C1QTNF9P0C862 333 aa13.99□□□□□ -0.17
UFD1-203ENST00000421968 ARHGAP4P98171 946 aa13.99□□□□□ -0.17
UFD1-203ENST00000421968 SPEM2Q0P670 501 aa13.99□□□□□ -0.17
UFD1-203ENST00000421968 UBE3CQ15386 1083 aa13.99□□□□□ -0.17
UFD1-203ENST00000421968 PHLDB3Q6NSJ2 640 aa13.99□□□□□ -0.17
UFD1-203ENST00000421968 COLGALT1Q8NBJ5 622 aa13.99□□□□□ -0.17
UFD1-203ENST00000421968 DDX1Q92499 740 aaKnown RBP13.99□□□□□ -0.17
UFD1-203ENST00000421968 MRPS27Q92552 414 aaKnown RBP13.99□□□□□ -0.17
UFD1-203ENST00000421968 IWS1Q96ST2 819 aa13.99□□□□□ -0.17
UFD1-203ENST00000421968 EPC1Q9H2F5 836 aa13.99□□□□□ -0.17
UFD1-203ENST00000421968 PAG1Q9NWQ8 432 aa13.99□□□□□ -0.17
UFD1-203ENST00000421968 IGSF9Q9P2J2 1179 aa13.99□□□□□ -0.17
UFD1-203ENST00000421968 LHX6Q9UPM6 363 aa13.99□□□□□ -0.17
UFD1-203ENST00000421968 LZTS1Q9Y250 596 aa13.99□□□□□ -0.17
UFD1-203ENST00000421968 SUPT16HQ9Y5B9 1047 aaKnown RBP13.99□□□□□ -0.17
UFD1-203ENST00000421968 GSG1L2A8MUP6 293 aa13.98□□□□□ -0.17
UFD1-203ENST00000421968 LAMTOR5O43504 91 aa13.98□□□□□ -0.17
UFD1-203ENST00000421968 EIF3JO75822 258 aaKnown RBP13.98□□□□□ -0.17
UFD1-203ENST00000421968 GGPS1O95749 300 aa13.98□□□□□ -0.17
UFD1-203ENST00000421968 LGALS2P05162 132 aa13.98□□□□□ -0.17
UFD1-203ENST00000421968 SCG2P13521 617 aa13.98□□□□□ -0.17
UFD1-203ENST00000421968 GLULP15104 373 aa13.98□□□□□ -0.17
UFD1-203ENST00000421968 CD52P31358 61 aa13.98□□□□□ -0.17
UFD1-203ENST00000421968 CSTF1Q05048 431 aaKnown RBP13.98□□□□□ -0.17
UFD1-203ENST00000421968 PPP4R3BQ5MIZ7 849 aa13.98□□□□□ -0.17
UFD1-203ENST00000421968 FBXO47Q5MNV8 452 aa13.98□□□□□ -0.17
UFD1-203ENST00000421968 CELF3Q5SZQ8 465 aaKnown RBP13.98□□□□□ -0.17
UFD1-203ENST00000421968 GIMAP6Q6P9H5 292 aa13.98□□□□□ -0.17
UFD1-203ENST00000421968 BTNL9Q6UXG8 535 aa13.98□□□□□ -0.17
UFD1-203ENST00000421968 UNQ6494/PRO21346Q6UXR6 183 aa13.98□□□□□ -0.17
UFD1-203ENST00000421968 TSHZ1Q6ZSZ6 1077 aa13.98□□□□□ -0.17
UFD1-203ENST00000421968 TMC7Q7Z402 723 aa13.98□□□□□ -0.17
UFD1-203ENST00000421968 RMDN3Q96TC7 470 aa13.98□□□□□ -0.17
UFD1-203ENST00000421968 GPR20Q99678 358 aa13.98□□□□□ -0.17
UFD1-203ENST00000421968 SPATA6Q9NWH7 488 aaPredicted RBP13.98□□□□□ -0.17
UFD1-203ENST00000421968 FBXO4Q9UKT5 387 aa13.98□□□□□ -0.17
UFD1-203ENST00000421968 TBKBP1A7MCY6 615 aa13.97□□□□□ -0.17
UFD1-203ENST00000421968 TBC1D4O60343 1298 aa13.97□□□□□ -0.17
UFD1-203ENST00000421968 RING1Q06587 406 aa13.97□□□□□ -0.17
UFD1-203ENST00000421968 MGAT3Q09327 533 aa13.97□□□□□ -0.17
UFD1-203ENST00000421968 CCDC149Q6ZUS6 474 aa13.97□□□□□ -0.17
UFD1-203ENST00000421968 RGS22Q8NE09 1264 aa13.97□□□□□ -0.17
UFD1-203ENST00000421968 DCAF4Q8WV16 495 aa13.97□□□□□ -0.17
UFD1-203ENST00000421968 STRBPQ96SI9 672 aaKnown RBP13.97□□□□□ -0.17
UFD1-203ENST00000421968 FTHL17Q9BXU8 183 aa13.97□□□□□ -0.17
UFD1-203ENST00000421968 AGO3Q9H9G7 860 aaKnown RBP13.97□□□□□ -0.17
UFD1-203ENST00000421968 GPCPD1Q9NPB8 672 aa13.97□□□□□ -0.17
UFD1-203ENST00000421968 HCSTQ9UBK5 93 aa13.97□□□□□ -0.17
UFD1-203ENST00000421968 FNDC1Q4ZHG4 1894 aaPredicted RBP13.96□□□□□ -0.17
UFD1-203ENST00000421968 DENND4AQ7Z401 1863 aa13.96□□□□□ -0.17
UFD1-203ENST00000421968 CLASP2O75122 1294 aaKnown RBP13.96□□□□□ -0.17
UFD1-203ENST00000421968 EIF2AK2P19525 551 aaKnown RBP13.96□□□□□ -0.17
UFD1-203ENST00000421968 TDO2P48775 406 aa13.96□□□□□ -0.17
UFD1-203ENST00000421968 PLCB3Q01970 1234 aa13.96□□□□□ -0.17
UFD1-203ENST00000421968 NONOQ15233 471 aaKnown RBP eCLIP13.96□□□□□ -0.17
UFD1-203ENST00000421968 USH1GQ495M9 461 aa13.96□□□□□ -0.17
UFD1-203ENST00000421968 ARHGEF16Q5VV41 709 aa13.96□□□□□ -0.17
UFD1-203ENST00000421968 RSPH3Q86UC2 560 aa13.96□□□□□ -0.17
UFD1-203ENST00000421968 KDF1Q8NAX2 398 aaPredicted RBP13.96□□□□□ -0.17
UFD1-203ENST00000421968 ZBTB44Q8NCP5 570 aa13.96□□□□□ -0.17
UFD1-203ENST00000421968 SYTL5Q8TDW5 730 aaPredicted RBP13.96□□□□□ -0.17
UFD1-203ENST00000421968 LMBR1Q8WVP7 490 aa13.96□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms