RNA–Protein interactions for RNA: ENST00000421870.1

LINC01840-201, Transcript of long intergenic non-protein coding RNA 1840, humanhuman

TSL 4 BASIC

Gene LINC01840, Length 571 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01840-201ENST00000421870 RSPH10B2B2RC85 870 aa16.84■□□□□ 0.29
LINC01840-201ENST00000421870 RSPH10BP0C881 870 aa16.84■□□□□ 0.29
LINC01840-201ENST00000421870 FDPSP14324 419 aaKnown RBP16.84■□□□□ 0.29
LINC01840-201ENST00000421870 CYP3A7P24462 503 aa16.84■□□□□ 0.29
LINC01840-201ENST00000421870 MARK3P27448 753 aa16.84■□□□□ 0.29
LINC01840-201ENST00000421870 SLC26A2P50443 739 aa16.84■□□□□ 0.29
LINC01840-201ENST00000421870 PRR16Q569H4 304 aa16.84■□□□□ 0.29
LINC01840-201ENST00000421870 FAM26DQ5JW98 314 aa16.84■□□□□ 0.29
LINC01840-201ENST00000421870 CNKSR3Q6P9H4 555 aa16.84■□□□□ 0.29
LINC01840-201ENST00000421870 NECAB1Q8N987 351 aa16.84■□□□□ 0.29
LINC01840-201ENST00000421870 TBCKQ8TEA7 893 aa16.84■□□□□ 0.29
LINC01840-201ENST00000421870 TNPO1Q92973 898 aaKnown RBP16.84■□□□□ 0.29
LINC01840-201ENST00000421870 GTF3C6Q969F1 213 aa16.84■□□□□ 0.29
LINC01840-201ENST00000421870 CDX2Q99626 313 aaPredicted RBP16.84■□□□□ 0.29
LINC01840-201ENST00000421870 AZI2Q9H6S1 392 aa16.84■□□□□ 0.29
LINC01840-201ENST00000421870 PTPRSQ13332 1948 aa16.84■□□□□ 0.29
LINC01840-201ENST00000421870 ABHD14A-ACY1A0A1B0GW23 586 aa16.83■□□□□ 0.28
LINC01840-201ENST00000421870 ZBBXA8MT70 800 aa16.83■□□□□ 0.28
LINC01840-201ENST00000421870 LARGE1O95461 756 aa16.83■□□□□ 0.28
LINC01840-201ENST00000421870 INSRRP14616 1297 aa16.83■□□□□ 0.28
LINC01840-201ENST00000421870 ATP2A2P16615 1042 aaKnown RBP16.83■□□□□ 0.28
LINC01840-201ENST00000421870 PPFIA1Q13136 1202 aa16.83■□□□□ 0.28
LINC01840-201ENST00000421870 RAB30Q15771 203 aa16.83■□□□□ 0.28
LINC01840-201ENST00000421870 GRIK4Q16099 956 aa16.83■□□□□ 0.28
LINC01840-201ENST00000421870 ZNF746Q6NUN9 644 aaPredicted RBP16.83■□□□□ 0.28
LINC01840-201ENST00000421870 KIF2CQ99661 725 aa16.83■□□□□ 0.28
LINC01840-201ENST00000421870 ZNF576Q9H609 170 aa16.83■□□□□ 0.28
LINC01840-201ENST00000421870 MSRAQ9UJ68 235 aa16.83■□□□□ 0.28
LINC01840-201ENST00000421870 KCNJ14Q9UNX9 436 aa16.83■□□□□ 0.28
LINC01840-201ENST00000421870 PCDHA11Q9Y5I1 949 aa16.83■□□□□ 0.28
LINC01840-201ENST00000421870 CDH23Q9H251 3354 aa16.82■□□□□ 0.28
LINC01840-201ENST00000421870 MSH4O15457 936 aa16.82■□□□□ 0.28
LINC01840-201ENST00000421870 XBP1P17861 261 aa16.82■□□□□ 0.28
LINC01840-201ENST00000421870 PLCB4Q15147 1175 aa16.82■□□□□ 0.28
LINC01840-201ENST00000421870 TCTN1Q2MV58 587 aa16.82■□□□□ 0.28
LINC01840-201ENST00000421870 Q4G0T1 1027 aa16.82■□□□□ 0.28
LINC01840-201ENST00000421870 PLEKHG4Q58EX7 1191 aa16.82■□□□□ 0.28
LINC01840-201ENST00000421870 TAF2Q6P1X5 1199 aa16.82■□□□□ 0.28
LINC01840-201ENST00000421870 SMAP1Q8IYB5 467 aaPredicted RBP16.82■□□□□ 0.28
LINC01840-201ENST00000421870 MBOAT7Q96N66 472 aa16.82■□□□□ 0.28
LINC01840-201ENST00000421870 SLC9A7Q96T83 725 aa16.82■□□□□ 0.28
LINC01840-201ENST00000421870 RIT2Q99578 217 aa16.82■□□□□ 0.28
LINC01840-201ENST00000421870 GJB4Q9NTQ9 266 aa16.82■□□□□ 0.28
LINC01840-201ENST00000421870 ORC3Q9UBD5 711 aaPredicted RBP16.82■□□□□ 0.28
LINC01840-201ENST00000421870 CHD9Q3L8U1 2897 aa16.81■□□□□ 0.28
LINC01840-201ENST00000421870 DDX39AO00148 427 aaKnown RBP16.81■□□□□ 0.28
LINC01840-201ENST00000421870 DTNBO60941 627 aa16.81■□□□□ 0.28
LINC01840-201ENST00000421870 EFCAB14O75071 495 aa16.81■□□□□ 0.28
LINC01840-201ENST00000421870 ATP4AP20648 1035 aa16.81■□□□□ 0.28
LINC01840-201ENST00000421870 RABGGTBP53611 331 aa16.81■□□□□ 0.28
LINC01840-201ENST00000421870 KRT76Q01546 638 aa16.81■□□□□ 0.28
LINC01840-201ENST00000421870 MKRN4PQ13434 485 aaPredicted RBP16.81■□□□□ 0.28
LINC01840-201ENST00000421870 IKBKEQ14164 716 aa16.81■□□□□ 0.28
LINC01840-201ENST00000421870 GRIN2CQ14957 1233 aa16.81■□□□□ 0.28
LINC01840-201ENST00000421870 SWSAP1Q6NVH7 229 aa16.81■□□□□ 0.28
LINC01840-201ENST00000421870 MIS18BP1Q6P0N0 1132 aa16.81■□□□□ 0.28
LINC01840-201ENST00000421870 MOXD1Q6UVY6 613 aa16.81■□□□□ 0.28
LINC01840-201ENST00000421870 RUFY4Q6ZNE9 571 aa16.81■□□□□ 0.28
LINC01840-201ENST00000421870 CCDC60Q8IWA6 550 aaPredicted RBP16.81■□□□□ 0.28
LINC01840-201ENST00000421870 NSUN7Q8NE18 718 aaKnown RBP16.81■□□□□ 0.28
LINC01840-201ENST00000421870 DBF4BQ8NFT6 615 aa16.81■□□□□ 0.28
LINC01840-201ENST00000421870 WASF1Q92558 559 aa16.81■□□□□ 0.28
LINC01840-201ENST00000421870 SLC5A5Q92911 643 aa16.81■□□□□ 0.28
LINC01840-201ENST00000421870 UIMC1Q96RL1 719 aa16.81■□□□□ 0.28
LINC01840-201ENST00000421870 TUBE1Q9UJT0 475 aa16.81■□□□□ 0.28
LINC01840-201ENST00000421870 YBX2Q9Y2T7 364 aaKnown RBP16.81■□□□□ 0.28
LINC01840-201ENST00000421870 PCDHA10Q9Y5I2 948 aa16.81■□□□□ 0.28
LINC01840-201ENST00000421870 MAFBQ9Y5Q3 323 aaPredicted RBP16.81■□□□□ 0.28
LINC01840-201ENST00000421870 POTEB3A0JP26 581 aa16.8■□□□□ 0.28
LINC01840-201ENST00000421870 HBP1O60381 514 aa16.8■□□□□ 0.28
LINC01840-201ENST00000421870 CHRNA1P02708 482 aa16.8■□□□□ 0.28
LINC01840-201ENST00000421870 RPLP2P05387 115 aaKnown RBP16.8■□□□□ 0.28
LINC01840-201ENST00000421870 RBM25P49756 843 aaKnown RBP16.8■□□□□ 0.28
LINC01840-201ENST00000421870 WDR5P61964 334 aaKnown RBP16.8■□□□□ 0.28
LINC01840-201ENST00000421870 NONOQ15233 471 aaKnown RBP eCLIP16.8■□□□□ 0.28
LINC01840-201ENST00000421870 FAM160B1Q5W0V3 765 aa16.8■□□□□ 0.28
LINC01840-201ENST00000421870 POTEBQ6S5H4 581 aa16.8■□□□□ 0.28
LINC01840-201ENST00000421870 KRT25Q7Z3Z0 450 aa16.8■□□□□ 0.28
LINC01840-201ENST00000421870 HERC6Q8IVU3 1022 aa16.8■□□□□ 0.28
LINC01840-201ENST00000421870 OSBPL7Q9BZF2 842 aa16.8■□□□□ 0.28
LINC01840-201ENST00000421870 ZNF302Q9NR11 478 aa16.8■□□□□ 0.28
LINC01840-201ENST00000421870 LIMCH1Q9UPQ0 1083 aa16.8■□□□□ 0.28
LINC01840-201ENST00000421870 PCDHA2Q9Y5H9 948 aa16.8■□□□□ 0.28
LINC01840-201ENST00000421870 MICAL3Q7RTP6 2002 aa16.8■□□□□ 0.28
LINC01840-201ENST00000421870 EVPLQ92817 2033 aa16.8■□□□□ 0.28
LINC01840-201ENST00000421870 SIP14410 1827 aa16.8■□□□□ 0.28
LINC01840-201ENST00000421870 LOXHD1Q8IVV2 1947 aa16.79■□□□□ 0.28
LINC01840-201ENST00000421870 BACH1O14867 736 aa16.79■□□□□ 0.28
LINC01840-201ENST00000421870 MGAT3Q09327 533 aa16.79■□□□□ 0.28
LINC01840-201ENST00000421870 ST3GAL1Q11201 340 aa16.79■□□□□ 0.28
LINC01840-201ENST00000421870 PDXDC2PQ6P474 469 aa16.79■□□□□ 0.28
LINC01840-201ENST00000421870 B3GNT9Q6UX72 402 aa16.79■□□□□ 0.28
LINC01840-201ENST00000421870 ATP8B4Q8TF62 1192 aa16.79■□□□□ 0.28
LINC01840-201ENST00000421870 DNAJB3Q8WWF6 145 aa16.79■□□□□ 0.28
LINC01840-201ENST00000421870 NKX2-4Q9H2Z4 354 aa16.79■□□□□ 0.28
LINC01840-201ENST00000421870 SLC28A3Q9HAS3 691 aa16.79■□□□□ 0.28
LINC01840-201ENST00000421870 TRPC6Q9Y210 931 aa16.79■□□□□ 0.28
LINC01840-201ENST00000421870 MYO9BQ13459 2157 aa16.79■□□□□ 0.28
LINC01840-201ENST00000421870 PSMD10O75832 226 aa16.78■□□□□ 0.28
LINC01840-201ENST00000421870 TDP2O95551 362 aa16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms