RNA–Protein interactions for RNA: ENST00000421670.3

DDX55-203, Transcript of DEAD-box helicase 55, humanhuman

TSL 1 (best) BASIC

Gene DDX55, Length 1,574 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-203ENST00000421670 GADD45BO75293 160 aaPredicted RBP17.63■□□□□ 0.41
DDX55-203ENST00000421670 MYL3P08590 195 aa17.63■□□□□ 0.41
DDX55-203ENST00000421670 CTTNQ14247 550 aaKnown RBP17.63■□□□□ 0.41
DDX55-203ENST00000421670 LRRC41Q15345 812 aa17.63■□□□□ 0.41
DDX55-203ENST00000421670 BRDTQ58F21 947 aaPredicted RBP17.63■□□□□ 0.41
DDX55-203ENST00000421670 COL13A1Q5TAT6 717 aaPredicted RBP17.63■□□□□ 0.41
DDX55-203ENST00000421670 KRT79Q5XKE5 535 aa17.63■□□□□ 0.41
DDX55-203ENST00000421670 HAUS3Q68CZ6 603 aa17.63■□□□□ 0.41
DDX55-203ENST00000421670 POTEBQ6S5H4 581 aa17.63■□□□□ 0.41
DDX55-203ENST00000421670 CABP7Q86V35 215 aa17.63■□□□□ 0.41
DDX55-203ENST00000421670 ZNF579Q8NAF0 562 aaKnown RBP17.63■□□□□ 0.41
DDX55-203ENST00000421670 KLHDC9Q8NEP7 349 aa17.63■□□□□ 0.41
DDX55-203ENST00000421670 LXNQ9BS40 222 aa17.63■□□□□ 0.41
DDX55-203ENST00000421670 ZNF302Q9NR11 478 aa17.63■□□□□ 0.41
DDX55-203ENST00000421670 WRAP73Q9P2S5 460 aaPredicted RBP17.63■□□□□ 0.41
DDX55-203ENST00000421670 PPFIA4O75335 1185 aa17.62■□□□□ 0.41
DDX55-203ENST00000421670 PRPF40AO75400 957 aaKnown RBP17.62■□□□□ 0.41
DDX55-203ENST00000421670 SPATA31C1P0DKV0 1188 aa17.62■□□□□ 0.41
DDX55-203ENST00000421670 CCT6AP40227 531 aaKnown RBP17.62■□□□□ 0.41
DDX55-203ENST00000421670 UBA7P41226 1012 aa17.62■□□□□ 0.41
DDX55-203ENST00000421670 NKX3-2P78367 333 aa17.62■□□□□ 0.41
DDX55-203ENST00000421670 ECM1Q16610 540 aa17.62■□□□□ 0.41
DDX55-203ENST00000421670 RESP18Q5W5W9 173 aa17.62■□□□□ 0.41
DDX55-203ENST00000421670 ADALQ6DHV7 355 aa17.62■□□□□ 0.41
DDX55-203ENST00000421670 POTEGQ6S5H5 508 aa17.62■□□□□ 0.41
DDX55-203ENST00000421670 RNF180Q86T96 592 aa17.62■□□□□ 0.41
DDX55-203ENST00000421670 CATSPER3Q86XQ3 398 aa17.62■□□□□ 0.41
DDX55-203ENST00000421670 U2AF1L4Q8WU68 220 aaKnown RBP17.62■□□□□ 0.41
DDX55-203ENST00000421670 GLG1Q92896 1179 aa17.62■□□□□ 0.41
DDX55-203ENST00000421670 HSD17B14Q9BPX1 270 aa17.62■□□□□ 0.41
DDX55-203ENST00000421670 GOLGA6L4A6NEF3 574 aa17.62■□□□□ 0.41
DDX55-203ENST00000421670 LGR5O75473 907 aa17.62■□□□□ 0.41
DDX55-203ENST00000421670 SLITRK3O94933 977 aa17.62■□□□□ 0.41
DDX55-203ENST00000421670 P4HBP07237 508 aaKnown RBP17.62■□□□□ 0.41
DDX55-203ENST00000421670 GJB1P08034 283 aa17.62■□□□□ 0.41
DDX55-203ENST00000421670 MARK3P27448 753 aa17.62■□□□□ 0.41
DDX55-203ENST00000421670 CST5P28325 142 aaPredicted RBP17.62■□□□□ 0.41
DDX55-203ENST00000421670 KARSQ15046 597 aaKnown RBP17.62■□□□□ 0.41
DDX55-203ENST00000421670 KCNA10Q16322 511 aa17.62■□□□□ 0.41
DDX55-203ENST00000421670 CCSAPQ6IQ19 270 aaPredicted RBP17.62■□□□□ 0.41
DDX55-203ENST00000421670 TRMT1LQ7Z2T5 733 aaKnown RBP17.62■□□□□ 0.41
DDX55-203ENST00000421670 TPH2Q8IWU9 490 aa17.62■□□□□ 0.41
DDX55-203ENST00000421670 PLIN2Q99541 437 aa17.62■□□□□ 0.41
DDX55-203ENST00000421670 C16orf70Q9BSU1 422 aa17.62■□□□□ 0.41
DDX55-203ENST00000421670 AZI2Q9H6S1 392 aa17.62■□□□□ 0.41
DDX55-203ENST00000421670 A0A1B0GVL5 298 aa17.61■□□□□ 0.41
DDX55-203ENST00000421670 ZNF862O60290 1169 aa17.61■□□□□ 0.41
DDX55-203ENST00000421670 ASGR1P07306 291 aa17.61■□□□□ 0.41
DDX55-203ENST00000421670 RPA1P27694 616 aa17.61■□□□□ 0.41
DDX55-203ENST00000421670 TXLNAP40222 546 aa17.61■□□□□ 0.41
DDX55-203ENST00000421670 QARSP47897 775 aaKnown RBP17.61■□□□□ 0.41
DDX55-203ENST00000421670 STAT5BP51692 787 aa17.61■□□□□ 0.41
DDX55-203ENST00000421670 CHMP4BP1P59074 171 aa17.61■□□□□ 0.41
DDX55-203ENST00000421670 PURAQ00577 322 aaKnown RBP17.61■□□□□ 0.41
DDX55-203ENST00000421670 FAM160B1Q5W0V3 765 aa17.61■□□□□ 0.41
DDX55-203ENST00000421670 PDXDC2PQ6P474 469 aa17.61■□□□□ 0.41
DDX55-203ENST00000421670 CXCL17Q6UXB2 119 aa17.61■□□□□ 0.41
DDX55-203ENST00000421670 RASSF8Q8NHQ8 419 aa17.61■□□□□ 0.41
DDX55-203ENST00000421670 NEK9Q8TD19 979 aa17.61■□□□□ 0.41
DDX55-203ENST00000421670 AFAP1L1Q8TED9 768 aa17.61■□□□□ 0.41
DDX55-203ENST00000421670 POLR3CQ9BUI4 534 aaPredicted RBP17.61■□□□□ 0.41
DDX55-203ENST00000421670 OGDHLQ9ULD0 1010 aa17.61■□□□□ 0.41
DDX55-203ENST00000421670 MAFBQ9Y5Q3 323 aaPredicted RBP17.61■□□□□ 0.41
DDX55-203ENST00000421670 TRIP12Q14669 1992 aaPredicted RBP17.61■□□□□ 0.41
DDX55-203ENST00000421670 A0A087X0B3 334 aa17.6■□□□□ 0.41
DDX55-203ENST00000421670 SGPL1O95470 568 aa17.6■□□□□ 0.41
DDX55-203ENST00000421670 F2P00734 622 aa17.6■□□□□ 0.41
DDX55-203ENST00000421670 ATP4AP20648 1035 aa17.6■□□□□ 0.41
DDX55-203ENST00000421670 PSMC5P62195 406 aa17.6■□□□□ 0.41
DDX55-203ENST00000421670 PRKCEQ02156 737 aa17.6■□□□□ 0.41
DDX55-203ENST00000421670 GRB10Q13322 594 aa17.6■□□□□ 0.41
DDX55-203ENST00000421670 PDILTQ8N807 584 aa17.6■□□□□ 0.41
DDX55-203ENST00000421670 FSIP1Q8NA03 581 aa17.6■□□□□ 0.41
DDX55-203ENST00000421670 PPP1R13LQ8WUF5 828 aa17.6■□□□□ 0.41
DDX55-203ENST00000421670 MRPS27Q92552 414 aaKnown RBP17.6■□□□□ 0.41
DDX55-203ENST00000421670 KAT2BQ92831 832 aa17.6■□□□□ 0.41
DDX55-203ENST00000421670 ATP6V0A1Q93050 837 aa17.6■□□□□ 0.41
DDX55-203ENST00000421670 PNMA5Q96PV4 448 aa17.6■□□□□ 0.41
DDX55-203ENST00000421670 PANK2Q9BZ23 570 aa17.6■□□□□ 0.41
DDX55-203ENST00000421670 CCSER1Q9C0I3 900 aa17.6■□□□□ 0.41
DDX55-203ENST00000421670 CRISPLD2Q9H0B8 497 aa17.6■□□□□ 0.41
DDX55-203ENST00000421670 GOLPH3LQ9H4A5 285 aa17.6■□□□□ 0.41
DDX55-203ENST00000421670 SMARCAD1Q9H4L7 1026 aa17.6■□□□□ 0.41
DDX55-203ENST00000421670 TUFT1Q9NNX1 390 aa17.6■□□□□ 0.41
DDX55-203ENST00000421670 DDX19AQ9NUU7 478 aaKnown RBP17.6■□□□□ 0.41
DDX55-203ENST00000421670 KDM3AQ9Y4C1 1321 aa17.6■□□□□ 0.41
DDX55-203ENST00000421670 A0A087WWV3 80 aa17.59■□□□□ 0.41
DDX55-203ENST00000421670 A0A1W2PQ27 194 aa17.59■□□□□ 0.41
DDX55-203ENST00000421670 A0A1W2PQ64 194 aa17.59■□□□□ 0.41
DDX55-203ENST00000421670 A0A1W2PQD8 194 aa17.59■□□□□ 0.41
DDX55-203ENST00000421670 TMEM150BA6NC51 233 aa17.59■□□□□ 0.41
DDX55-203ENST00000421670 H3BRB1 525 aa17.59■□□□□ 0.41
DDX55-203ENST00000421670 ZBTB39O15060 712 aa17.59■□□□□ 0.41
DDX55-203ENST00000421670 ZEB2O60315 1214 aa17.59■□□□□ 0.41
DDX55-203ENST00000421670 PFKFB1P16118 471 aa17.59■□□□□ 0.41
DDX55-203ENST00000421670 PLCG1P19174 1290 aa17.59■□□□□ 0.41
DDX55-203ENST00000421670 CMA1P23946 247 aa17.59■□□□□ 0.41
DDX55-203ENST00000421670 CKAP2LQ8IYA6 745 aa17.59■□□□□ 0.41
DDX55-203ENST00000421670 PCSK9Q8NBP7 692 aaKnown RBP17.59■□□□□ 0.41
DDX55-203ENST00000421670 ARRDC4Q8NCT1 418 aa17.59■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms