RNA–Protein interactions for RNA: ENST00000421324.4

AC012560.1-202, humanhuman

TSL 1 (best) BASIC

Gene AC012560.1, Length 535 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC012560.1-202ENST00000421324 ZEB2O60315 1214 aa8.73□□□□□ -1.01
AC012560.1-202ENST00000421324 EIF5BO60841 1220 aaKnown RBP8.73□□□□□ -1.01
AC012560.1-202ENST00000421324 ADAMTS4O75173 837 aa8.73□□□□□ -1.01
AC012560.1-202ENST00000421324 POLR2MP0CAP2 368 aa8.73□□□□□ -1.01
AC012560.1-202ENST00000421324 RXRAP19793 462 aa8.73□□□□□ -1.01
AC012560.1-202ENST00000421324 ACLYP53396 1101 aa8.73□□□□□ -1.01
AC012560.1-202ENST00000421324 GJA9P57773 515 aa8.73□□□□□ -1.01
AC012560.1-202ENST00000421324 KCNA10Q16322 511 aa8.73□□□□□ -1.01
AC012560.1-202ENST00000421324 LRRC26Q2I0M4 334 aa8.73□□□□□ -1.01
AC012560.1-202ENST00000421324 ARHGEF16Q5VV41 709 aa8.73□□□□□ -1.01
AC012560.1-202ENST00000421324 TAPT1Q6NXT6 567 aa8.73□□□□□ -1.01
AC012560.1-202ENST00000421324 BLOC1S2Q6QNY1 142 aa8.73□□□□□ -1.01
AC012560.1-202ENST00000421324 FBXO16Q8IX29 292 aaPredicted RBP8.73□□□□□ -1.01
AC012560.1-202ENST00000421324 KLHDC9Q8NEP7 349 aa8.73□□□□□ -1.01
AC012560.1-202ENST00000421324 LENG1Q96BZ8 264 aaPredicted RBP8.73□□□□□ -1.01
AC012560.1-202ENST00000421324 TCEANC2Q96MN5 208 aa8.73□□□□□ -1.01
AC012560.1-202ENST00000421324 JAKMIP1Q96N16 626 aaKnown RBP8.73□□□□□ -1.01
AC012560.1-202ENST00000421324 TAAR1Q96RJ0 339 aa8.73□□□□□ -1.01
AC012560.1-202ENST00000421324 IWS1Q96ST2 819 aa8.73□□□□□ -1.01
AC012560.1-202ENST00000421324 RMDN3Q96TC7 470 aa8.73□□□□□ -1.01
AC012560.1-202ENST00000421324 WDR11Q9BZH6 1224 aa8.73□□□□□ -1.01
AC012560.1-202ENST00000421324 PDGFCQ9NRA1 345 aa8.73□□□□□ -1.01
AC012560.1-202ENST00000421324 PRKAG2Q9UGJ0 569 aa8.73□□□□□ -1.01
AC012560.1-202ENST00000421324 SERTAD1Q9UHV2 236 aa8.73□□□□□ -1.01
AC012560.1-202ENST00000421324 NAP1L2Q9ULW6 460 aaPredicted RBP8.73□□□□□ -1.01
AC012560.1-202ENST00000421324 Q9Y3F1 56 aa8.73□□□□□ -1.01
AC012560.1-202ENST00000421324 SNX14Q9Y5W7 946 aa8.73□□□□□ -1.01
AC012560.1-202ENST00000421324 DDX49Q9Y6V7 483 aaKnown RBP8.73□□□□□ -1.01
AC012560.1-202ENST00000421324 ASTN1O14525 1302 aa8.73□□□□□ -1.01
AC012560.1-202ENST00000421324 SMCHD1A6NHR9 2005 aa8.72□□□□□ -1.01
AC012560.1-202ENST00000421324 C11orf97A0A1B0GVM6 126 aaPredicted RBP8.72□□□□□ -1.01
AC012560.1-202ENST00000421324 A6NJY4 79 aa8.72□□□□□ -1.01
AC012560.1-202ENST00000421324 CDK2AP1O14519 115 aa8.72□□□□□ -1.01
AC012560.1-202ENST00000421324 ZBTB43O43298 467 aa8.72□□□□□ -1.01
AC012560.1-202ENST00000421324 PPP1R11O60927 126 aaPredicted RBP8.72□□□□□ -1.01
AC012560.1-202ENST00000421324 ASGR1P07306 291 aa8.72□□□□□ -1.01
AC012560.1-202ENST00000421324 SYN1P17600 705 aa8.72□□□□□ -1.01
AC012560.1-202ENST00000421324 CST5P28325 142 aaPredicted RBP8.72□□□□□ -1.01
AC012560.1-202ENST00000421324 RTP1P59025 263 aa8.72□□□□□ -1.01
AC012560.1-202ENST00000421324 COL9A3Q14050 684 aaPredicted RBP8.72□□□□□ -1.01
AC012560.1-202ENST00000421324 UBAP2LQ14157 1087 aaKnown RBP8.72□□□□□ -1.01
AC012560.1-202ENST00000421324 STXBP2Q15833 593 aa8.72□□□□□ -1.01
AC012560.1-202ENST00000421324 SLC35G1Q2M3R5 365 aa8.72□□□□□ -1.01
AC012560.1-202ENST00000421324 DUSP28Q4G0W2 176 aa8.72□□□□□ -1.01
AC012560.1-202ENST00000421324 BRDTQ58F21 947 aaPredicted RBP8.72□□□□□ -1.01
AC012560.1-202ENST00000421324 APOA5Q6Q788 366 aa8.72□□□□□ -1.01
AC012560.1-202ENST00000421324 TLK2Q86UE8 772 aa8.72□□□□□ -1.01
AC012560.1-202ENST00000421324 MICU3Q86XE3 530 aa8.72□□□□□ -1.01
AC012560.1-202ENST00000421324 RAB11FIP4Q86YS3 637 aa8.72□□□□□ -1.01
AC012560.1-202ENST00000421324 CCDC82Q8N4S0 544 aa8.72□□□□□ -1.01
AC012560.1-202ENST00000421324 SRBD1Q8N5C6 995 aaKnown RBP8.72□□□□□ -1.01
AC012560.1-202ENST00000421324 SCFD2Q8WU76 684 aa8.72□□□□□ -1.01
AC012560.1-202ENST00000421324 CUL5Q93034 780 aa8.72□□□□□ -1.01
AC012560.1-202ENST00000421324 GTPBP3Q969Y2 492 aaKnown RBP8.72□□□□□ -1.01
AC012560.1-202ENST00000421324 GLT1D1Q96MS3 346 aa8.72□□□□□ -1.01
AC012560.1-202ENST00000421324 USP26Q9BXU7 913 aa8.72□□□□□ -1.01
AC012560.1-202ENST00000421324 UPF3AQ9H1J1 476 aaKnown RBP8.72□□□□□ -1.01
AC012560.1-202ENST00000421324 STARD7Q9NQZ5 370 aa8.72□□□□□ -1.01
AC012560.1-202ENST00000421324 RBM28Q9NW13 759 aaKnown RBP8.72□□□□□ -1.01
AC012560.1-202ENST00000421324 ZMYND8Q9ULU4 1186 aaPredicted RBP8.72□□□□□ -1.01
AC012560.1-202ENST00000421324 GNEQ9Y223 722 aaKnown RBP8.72□□□□□ -1.01
AC012560.1-202ENST00000421324 ATP11BQ9Y2G3 1177 aa8.72□□□□□ -1.01
AC012560.1-202ENST00000421324 KLF18A0A0U1RQI7 1052 aa8.71□□□□□ -1.02
AC012560.1-202ENST00000421324 CCDC196A0A1B0GTZ2 297 aa8.71□□□□□ -1.02
AC012560.1-202ENST00000421324 A0A1W2PQ45 241 aaPredicted RBP8.71□□□□□ -1.02
AC012560.1-202ENST00000421324 A0A1W2PQY0 241 aa8.71□□□□□ -1.02
AC012560.1-202ENST00000421324 RBM47A0AV96 593 aaKnown RBP8.71□□□□□ -1.02
AC012560.1-202ENST00000421324 FAM181BA6NEQ2 426 aa8.71□□□□□ -1.02
AC012560.1-202ENST00000421324 NKRFO15226 690 aaKnown RBP eCLIP8.71□□□□□ -1.02
AC012560.1-202ENST00000421324 ADCY6O43306 1168 aa8.71□□□□□ -1.02
AC012560.1-202ENST00000421324 EIF3JO75822 258 aaKnown RBP8.71□□□□□ -1.02
AC012560.1-202ENST00000421324 CABYRO75952 493 aa8.71□□□□□ -1.02
AC012560.1-202ENST00000421324 PLEKHA8P1O95397 391 aa8.71□□□□□ -1.02
AC012560.1-202ENST00000421324 TXNP10599 105 aaKnown RBP8.71□□□□□ -1.02
AC012560.1-202ENST00000421324 EIF2AK2P19525 551 aaKnown RBP8.71□□□□□ -1.02
AC012560.1-202ENST00000421324 CASTP20810 708 aaKnown RBP8.71□□□□□ -1.02
AC012560.1-202ENST00000421324 EDNRBP24530 442 aa8.71□□□□□ -1.02
AC012560.1-202ENST00000421324 MSX1P28360 303 aa8.71□□□□□ -1.02
AC012560.1-202ENST00000421324 HOXA13P31271 388 aaPredicted RBP8.71□□□□□ -1.02
AC012560.1-202ENST00000421324 HSD17B4P51659 736 aa8.71□□□□□ -1.02
AC012560.1-202ENST00000421324 NKX3-2P78367 333 aa8.71□□□□□ -1.02
AC012560.1-202ENST00000421324 GHRHRQ02643 423 aa8.71□□□□□ -1.02
AC012560.1-202ENST00000421324 TTLL4Q14679 1199 aa8.71□□□□□ -1.02
AC012560.1-202ENST00000421324 PPP2R5BQ15173 497 aa8.71□□□□□ -1.02
AC012560.1-202ENST00000421324 FSCN1Q16658 493 aaKnown RBP8.71□□□□□ -1.02
AC012560.1-202ENST00000421324 RTN1Q16799 776 aa8.71□□□□□ -1.02
AC012560.1-202ENST00000421324 C1orf53Q5VUE5 145 aa8.71□□□□□ -1.02
AC012560.1-202ENST00000421324 CCSAPQ6IQ19 270 aaPredicted RBP8.71□□□□□ -1.02
AC012560.1-202ENST00000421324 Q6ZUG5 572 aa8.71□□□□□ -1.02
AC012560.1-202ENST00000421324 TMTC3Q6ZXV5 915 aa8.71□□□□□ -1.02
AC012560.1-202ENST00000421324 FCHSD1Q86WN1 690 aa8.71□□□□□ -1.02
AC012560.1-202ENST00000421324 CMTR1Q8N1G2 835 aaKnown RBP8.71□□□□□ -1.02
AC012560.1-202ENST00000421324 SMARCC2Q8TAQ2 1214 aa8.71□□□□□ -1.02
AC012560.1-202ENST00000421324 LBHD1Q9BQE6 289 aaPredicted RBP8.71□□□□□ -1.02
AC012560.1-202ENST00000421324 NUCKS1Q9H1E3 243 aaKnown RBP8.71□□□□□ -1.02
AC012560.1-202ENST00000421324 ZNF358Q9NW07 568 aa8.71□□□□□ -1.02
AC012560.1-202ENST00000421324 COL20A1Q9P218 1284 aa8.71□□□□□ -1.02
AC012560.1-202ENST00000421324 BRPF3Q9ULD4 1205 aa8.71□□□□□ -1.02
AC012560.1-202ENST00000421324 USP3Q9Y6I4 520 aa8.71□□□□□ -1.02
AC012560.1-202ENST00000421324 ELP1O95163 1332 aa8.71□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms