RNA–Protein interactions for RNA: ENST00000419629.1

SDCBPP3-201, Transcript of syndecan binding protein pseudogene 3, humanhuman

BASIC

Gene SDCBPP3, Length 891 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBPP3-201ENST00000419629 GPR27Q9NS67 375 aa4.97□□□□□ -1.61
SDCBPP3-201ENST00000419629 PPARGC1AQ9UBK2 798 aaKnown RBP4.97□□□□□ -1.61
SDCBPP3-201ENST00000419629 PTPN22Q9Y2R2 807 aa4.97□□□□□ -1.61
SDCBPP3-201ENST00000419629 CCDC85CA6NKD9 419 aa4.96□□□□□ -1.62
SDCBPP3-201ENST00000419629 PDPK1O15530 556 aa4.96□□□□□ -1.62
SDCBPP3-201ENST00000419629 PFKPQ01813 784 aa4.96□□□□□ -1.62
SDCBPP3-201ENST00000419629 MAP4K2Q12851 820 aa4.96□□□□□ -1.62
SDCBPP3-201ENST00000419629 RASGRF1Q13972 1273 aa4.96□□□□□ -1.62
SDCBPP3-201ENST00000419629 NRN1LQ496H8 165 aa4.96□□□□□ -1.62
SDCBPP3-201ENST00000419629 MTERF2Q49AM1 385 aa4.96□□□□□ -1.62
SDCBPP3-201ENST00000419629 PAN2Q504Q3 1202 aaKnown RBP4.96□□□□□ -1.62
SDCBPP3-201ENST00000419629 OTOP3Q7RTS5 596 aa4.96□□□□□ -1.62
SDCBPP3-201ENST00000419629 REXO1L1PQ8IX06 675 aa4.96□□□□□ -1.62
SDCBPP3-201ENST00000419629 ARHGAP20Q9P2F6 1191 aa4.96□□□□□ -1.62
SDCBPP3-201ENST00000419629 MSRB2Q9Y3D2 182 aa4.96□□□□□ -1.62
SDCBPP3-201ENST00000419629 TELO2Q9Y4R8 837 aa4.96□□□□□ -1.62
SDCBPP3-201ENST00000419629 NUB1Q9Y5A7 615 aa4.96□□□□□ -1.62
SDCBPP3-201ENST00000419629 NARSO43776 548 aaKnown RBP4.95□□□□□ -1.62
SDCBPP3-201ENST00000419629 IL18BPO95998 194 aa4.95□□□□□ -1.62
SDCBPP3-201ENST00000419629 LTFP02788 710 aa4.95□□□□□ -1.62
SDCBPP3-201ENST00000419629 ENO2P09104 434 aaPredicted RBP4.95□□□□□ -1.62
SDCBPP3-201ENST00000419629 ZNF888P0CJ79 500 aaPredicted RBP4.95□□□□□ -1.62
SDCBPP3-201ENST00000419629 COMTP21964 271 aa4.95□□□□□ -1.62
SDCBPP3-201ENST00000419629 USP10Q14694 798 aaKnown RBP4.95□□□□□ -1.62
SDCBPP3-201ENST00000419629 NFE2L2Q16236 605 aa4.95□□□□□ -1.62
SDCBPP3-201ENST00000419629 USP39Q53GS9 565 aaKnown RBP4.95□□□□□ -1.62
SDCBPP3-201ENST00000419629 CD276Q5ZPR3 534 aa4.95□□□□□ -1.62
SDCBPP3-201ENST00000419629 Q6ZSN1 163 aa4.95□□□□□ -1.62
SDCBPP3-201ENST00000419629 DPH6Q7L8W6 267 aa4.95□□□□□ -1.62
SDCBPP3-201ENST00000419629 FUKQ8N0W3 1084 aa4.95□□□□□ -1.62
SDCBPP3-201ENST00000419629 UHMK1Q8TAS1 419 aaKnown RBP4.95□□□□□ -1.62
SDCBPP3-201ENST00000419629 PMFBP1Q8TBY8 1022 aa4.95□□□□□ -1.62
SDCBPP3-201ENST00000419629 KCTD13Q8WZ19 329 aa4.95□□□□□ -1.62
SDCBPP3-201ENST00000419629 EXTL1Q92935 676 aa4.95□□□□□ -1.62
SDCBPP3-201ENST00000419629 MKL1Q969V6 931 aa4.95□□□□□ -1.62
SDCBPP3-201ENST00000419629 IPO9Q96P70 1041 aaKnown RBP4.95□□□□□ -1.62
SDCBPP3-201ENST00000419629 AARSD1Q9BTE6 412 aaKnown RBP4.95□□□□□ -1.62
SDCBPP3-201ENST00000419629 CSRNP2Q9H175 543 aa4.95□□□□□ -1.62
SDCBPP3-201ENST00000419629 ZNF839A8K0R7 811 aa4.94□□□□□ -1.62
SDCBPP3-201ENST00000419629 H0Y858 1186 aa4.94□□□□□ -1.62
SDCBPP3-201ENST00000419629 DLX3O60479 287 aa4.94□□□□□ -1.62
SDCBPP3-201ENST00000419629 COL6A2P12110 1019 aa4.94□□□□□ -1.62
SDCBPP3-201ENST00000419629 PPP2R2AP63151 447 aa4.94□□□□□ -1.62
SDCBPP3-201ENST00000419629 SSRP1Q08945 709 aaKnown RBP4.94□□□□□ -1.62
SDCBPP3-201ENST00000419629 ABHD18Q0P651 414 aa4.94□□□□□ -1.62
SDCBPP3-201ENST00000419629 HABP4Q5JVS0 413 aaKnown RBP4.94□□□□□ -1.62
SDCBPP3-201ENST00000419629 RSPO2Q6UXX9 243 aaPredicted RBP4.94□□□□□ -1.62
SDCBPP3-201ENST00000419629 CHFRQ96EP1 664 aa4.94□□□□□ -1.62
SDCBPP3-201ENST00000419629 DEPDC7Q96QD5 511 aa4.94□□□□□ -1.62
SDCBPP3-201ENST00000419629 SRPK1Q96SB4 655 aaKnown RBP4.94□□□□□ -1.62
SDCBPP3-201ENST00000419629 DNAJC2Q99543 621 aaKnown RBP4.94□□□□□ -1.62
SDCBPP3-201ENST00000419629 PHF20Q9BVI0 1012 aa4.94□□□□□ -1.62
SDCBPP3-201ENST00000419629 C11orf21Q9P2W6 132 aa4.94□□□□□ -1.62
SDCBPP3-201ENST00000419629 NISCHQ9Y2I1 1504 aa4.93□□□□□ -1.62
SDCBPP3-201ENST00000419629 TRAV20A0A0B4J274 112 aa4.93□□□□□ -1.62
SDCBPP3-201ENST00000419629 A0A1W2PQU0 124 aa4.93□□□□□ -1.62
SDCBPP3-201ENST00000419629 ACOT7O00154 380 aa4.93□□□□□ -1.62
SDCBPP3-201ENST00000419629 NKRFO15226 690 aaKnown RBP eCLIP4.93□□□□□ -1.62
SDCBPP3-201ENST00000419629 RAD17O75943 681 aa4.93□□□□□ -1.62
SDCBPP3-201ENST00000419629 ZNF202O95125 648 aa4.93□□□□□ -1.62
SDCBPP3-201ENST00000419629 EPHA5P54756 1037 aa4.93□□□□□ -1.62
SDCBPP3-201ENST00000419629 SERINC3Q13530 473 aa4.93□□□□□ -1.62
SDCBPP3-201ENST00000419629 PNPLA5Q7Z6Z6 429 aaPredicted RBP4.93□□□□□ -1.62
SDCBPP3-201ENST00000419629 AMER2Q8N7J2 671 aa4.93□□□□□ -1.62
SDCBPP3-201ENST00000419629 IER2Q9BTL4 223 aa4.93□□□□□ -1.62
SDCBPP3-201ENST00000419629 SPATA9Q9BWV2 254 aa4.93□□□□□ -1.62
SDCBPP3-201ENST00000419629 CARD11Q9BXL7 1154 aa4.93□□□□□ -1.62
SDCBPP3-201ENST00000419629 OSBPL2Q9H1P3 480 aa4.93□□□□□ -1.62
SDCBPP3-201ENST00000419629 APPP05067 770 aa4.92□□□□□ -1.62
SDCBPP3-201ENST00000419629 FGFR1P11362 822 aa4.92□□□□□ -1.62
SDCBPP3-201ENST00000419629 ACO1P21399 889 aaKnown RBP4.92□□□□□ -1.62
SDCBPP3-201ENST00000419629 RAC3P60763 192 aa4.92□□□□□ -1.62
SDCBPP3-201ENST00000419629 DGCR2P98153 550 aa4.92□□□□□ -1.62
SDCBPP3-201ENST00000419629 PURAQ00577 322 aaKnown RBP4.92□□□□□ -1.62
SDCBPP3-201ENST00000419629 PTH1RQ03431 593 aa4.92□□□□□ -1.62
SDCBPP3-201ENST00000419629 DPTQ07507 201 aa4.92□□□□□ -1.62
SDCBPP3-201ENST00000419629 SMN1Q16637 294 aaKnown RBP4.92□□□□□ -1.62
SDCBPP3-201ENST00000419629 RNF151Q2KHN1 245 aa4.92□□□□□ -1.62
SDCBPP3-201ENST00000419629 ZC3H12BQ5HYM0 836 aaKnown RBP4.92□□□□□ -1.62
SDCBPP3-201ENST00000419629 LBX2Q6XYB7 198 aa4.92□□□□□ -1.62
SDCBPP3-201ENST00000419629 USP53Q70EK8 1073 aa4.92□□□□□ -1.62
SDCBPP3-201ENST00000419629 KCNJ15Q99712 375 aa4.92□□□□□ -1.62
SDCBPP3-201ENST00000419629 CDC6Q99741 560 aa4.92□□□□□ -1.62
SDCBPP3-201ENST00000419629 TACO1Q9BSH4 297 aaKnown RBP4.92□□□□□ -1.62
SDCBPP3-201ENST00000419629 WDR33Q9C0J8 1336 aaKnown RBP4.92□□□□□ -1.62
SDCBPP3-201ENST00000419629 PRODHO43272 600 aa4.91□□□□□ -1.62
SDCBPP3-201ENST00000419629 CENPBP07199 599 aaPredicted RBP4.91□□□□□ -1.62
SDCBPP3-201ENST00000419629 GNAT1P11488 350 aa4.91□□□□□ -1.62
SDCBPP3-201ENST00000419629 CR2P20023 1033 aa4.91□□□□□ -1.62
SDCBPP3-201ENST00000419629 GRK2P25098 689 aa4.91□□□□□ -1.62
SDCBPP3-201ENST00000419629 POLD1P28340 1107 aa4.91□□□□□ -1.62
SDCBPP3-201ENST00000419629 GRK3P35626 688 aa4.91□□□□□ -1.62
SDCBPP3-201ENST00000419629 ZEB1P37275 1124 aaPredicted RBP4.91□□□□□ -1.62
SDCBPP3-201ENST00000419629 SPIRE1Q08AE8 756 aa4.91□□□□□ -1.62
SDCBPP3-201ENST00000419629 TOP3AQ13472 1001 aaPredicted RBP4.91□□□□□ -1.62
SDCBPP3-201ENST00000419629 LONRF2Q1L5Z9 754 aa4.91□□□□□ -1.62
SDCBPP3-201ENST00000419629 LSM12Q3MHD2 195 aaKnown RBP4.91□□□□□ -1.62
SDCBPP3-201ENST00000419629 KCNT2Q6UVM3 1135 aa4.91□□□□□ -1.62
SDCBPP3-201ENST00000419629 MAMDC4Q6UXC1 1216 aa4.91□□□□□ -1.62
SDCBPP3-201ENST00000419629 NSMFQ6X4W1 530 aa4.91□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms