RNA–Protein interactions for RNA: ENST00000419533.1

UBR4-206, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 5

Gene UBR4, Length 5,583 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-206ENST00000419533 NWD2Q9ULI1 1742 aa9.17□□□□□ -0.94
UBR4-206ENST00000419533 MYO1FO00160 1098 aa9.17□□□□□ -0.94
UBR4-206ENST00000419533 LDHAP00338 332 aaKnown RBP9.17□□□□□ -0.94
UBR4-206ENST00000419533 MTMR1Q13613 665 aa9.17□□□□□ -0.94
UBR4-206ENST00000419533 NEDD9Q14511 834 aa9.17□□□□□ -0.94
UBR4-206ENST00000419533 AFAP1L1Q8TED9 768 aa9.17□□□□□ -0.94
UBR4-206ENST00000419533 RMDN3Q96TC7 470 aa9.17□□□□□ -0.94
UBR4-206ENST00000419533 TBC1D22BQ9NU19 505 aa9.17□□□□□ -0.94
UBR4-206ENST00000419533 PCDHA6Q9UN73 950 aa9.17□□□□□ -0.94
UBR4-206ENST00000419533 PCDHA8Q9Y5H6 950 aa9.17□□□□□ -0.94
UBR4-206ENST00000419533 LMO7Q8WWI1 1683 aa9.17□□□□□ -0.94
UBR4-206ENST00000419533 MYCP01106 439 aaPredicted RBP9.17□□□□□ -0.94
UBR4-206ENST00000419533 ARPP19P56211 112 aa9.17□□□□□ -0.94
UBR4-206ENST00000419533 HDLBPQ00341 1268 aaKnown RBP9.17□□□□□ -0.94
UBR4-206ENST00000419533 MAN2A1Q16706 1144 aa9.17□□□□□ -0.94
UBR4-206ENST00000419533 RABL6Q3YEC7 729 aaPredicted RBP9.17□□□□□ -0.94
UBR4-206ENST00000419533 ANGEL2Q5VTE6 544 aaKnown RBP9.17□□□□□ -0.94
UBR4-206ENST00000419533 CATSPER4Q7RTX7 472 aa9.17□□□□□ -0.94
UBR4-206ENST00000419533 FAM149B1Q96BN6 582 aa9.17□□□□□ -0.94
UBR4-206ENST00000419533 RAVER2Q9HCJ3 691 aaKnown RBP9.17□□□□□ -0.94
UBR4-206ENST00000419533 HERC5Q9UII4 1024 aaKnown RBP9.17□□□□□ -0.94
UBR4-206ENST00000419533 TNFAIP2Q03169 654 aa9.17□□□□□ -0.94
UBR4-206ENST00000419533 LMNB2Q03252 620 aa9.17□□□□□ -0.94
UBR4-206ENST00000419533 TTLL4Q14679 1199 aa9.17□□□□□ -0.94
UBR4-206ENST00000419533 TMTC3Q6ZXV5 915 aa9.17□□□□□ -0.94
UBR4-206ENST00000419533 LRRC4Q9HBW1 653 aa9.17□□□□□ -0.94
UBR4-206ENST00000419533 EMILIN3Q9NT22 766 aa9.17□□□□□ -0.94
UBR4-206ENST00000419533 K7ERI5 159 aa9.17□□□□□ -0.94
UBR4-206ENST00000419533 MARK3P27448 753 aa9.17□□□□□ -0.94
UBR4-206ENST00000419533 HHIPL2Q6UWX4 724 aa9.17□□□□□ -0.94
UBR4-206ENST00000419533 FAM84BQ96KN1 310 aaPredicted RBP9.17□□□□□ -0.94
UBR4-206ENST00000419533 MMP19Q99542 508 aa9.17□□□□□ -0.94
UBR4-206ENST00000419533 MTA3Q9BTC8 594 aa9.17□□□□□ -0.94
UBR4-206ENST00000419533 PCIF1Q9H4Z3 704 aa9.17□□□□□ -0.94
UBR4-206ENST00000419533 ATP6V0A4Q9HBG4 840 aa9.17□□□□□ -0.94
UBR4-206ENST00000419533 MYOM1P52179 1685 aa9.17□□□□□ -0.94
UBR4-206ENST00000419533 SRGAP2CP0DJJ0 459 aa9.16□□□□□ -0.94
UBR4-206ENST00000419533 TCP1P17987 556 aaKnown RBP9.16□□□□□ -0.94
UBR4-206ENST00000419533 SNAP25P60880 206 aa9.16□□□□□ -0.94
UBR4-206ENST00000419533 DSTYKQ6XUX3 929 aa9.16□□□□□ -0.94
UBR4-206ENST00000419533 C10orf67Q8IYJ2 551 aa9.16□□□□□ -0.94
UBR4-206ENST00000419533 SIX6OS1Q8N1H7 587 aa9.16□□□□□ -0.94
UBR4-206ENST00000419533 MSTO1Q9BUK6 570 aa9.16□□□□□ -0.94
UBR4-206ENST00000419533 FTOQ9C0B1 505 aaKnown RBP eCLIP9.16□□□□□ -0.94
UBR4-206ENST00000419533 SLC38A10Q9HBR0 1119 aa9.16□□□□□ -0.94
UBR4-206ENST00000419533 CPSF3Q9UKF6 684 aaKnown RBP9.16□□□□□ -0.94
UBR4-206ENST00000419533 PCDHA5Q9Y5H7 936 aa9.16□□□□□ -0.94
UBR4-206ENST00000419533 SRPRBQ9Y5M8 271 aaKnown RBP9.16□□□□□ -0.94
UBR4-206ENST00000419533 H7C0C1 242 aa9.16□□□□□ -0.94
UBR4-206ENST00000419533 ATP5OP48047 213 aa9.16□□□□□ -0.94
UBR4-206ENST00000419533 KRT76Q01546 638 aa9.16□□□□□ -0.94
UBR4-206ENST00000419533 CACNB1Q02641 598 aaPredicted RBP9.16□□□□□ -0.94
UBR4-206ENST00000419533 EPHA10Q5JZY3 1008 aa9.16□□□□□ -0.94
UBR4-206ENST00000419533 PPP4R3CPQ6ZMV5 832 aa9.16□□□□□ -0.94
UBR4-206ENST00000419533 RFX6Q8HWS3 928 aa9.16□□□□□ -0.94
UBR4-206ENST00000419533 MCPH1Q8NEM0 835 aa9.16□□□□□ -0.94
UBR4-206ENST00000419533 NLRP4Q96MN2 994 aa9.16□□□□□ -0.94
UBR4-206ENST00000419533 TMEM47Q9BQJ4 181 aa9.16□□□□□ -0.94
UBR4-206ENST00000419533 FAM49AQ9H0Q0 323 aaPredicted RBP9.16□□□□□ -0.94
UBR4-206ENST00000419533 TMEM63CQ9P1W3 806 aa9.16□□□□□ -0.94
UBR4-206ENST00000419533 SLC8A2Q9UPR5 921 aa9.16□□□□□ -0.94
UBR4-206ENST00000419533 RFX7Q2KHR2 1363 aa9.16□□□□□ -0.94
UBR4-206ENST00000419533 BUB1O43683 1085 aa9.16□□□□□ -0.94
UBR4-206ENST00000419533 GBP1P32455 592 aa9.16□□□□□ -0.94
UBR4-206ENST00000419533 RCAN1P53805 252 aa9.16□□□□□ -0.94
UBR4-206ENST00000419533 NR5A1Q13285 461 aa9.16□□□□□ -0.94
UBR4-206ENST00000419533 STMN2Q93045 179 aa9.16□□□□□ -0.94
UBR4-206ENST00000419533 OTUD5Q96G74 571 aa9.16□□□□□ -0.94
UBR4-206ENST00000419533 ZFYVE28Q9HCC9 887 aa9.16□□□□□ -0.94
UBR4-206ENST00000419533 RNF146Q9NTX7 359 aa9.16□□□□□ -0.94
UBR4-206ENST00000419533 ANAPC5Q9UJX4 755 aa9.16□□□□□ -0.94
UBR4-206ENST00000419533 WDR64B1ANS9 1081 aa9.16□□□□□ -0.94
UBR4-206ENST00000419533 CYP2D6P10635 497 aa9.16□□□□□ -0.94
UBR4-206ENST00000419533 FCER1AP12319 257 aa9.16□□□□□ -0.94
UBR4-206ENST00000419533 PHKA2P46019 1235 aa9.16□□□□□ -0.94
UBR4-206ENST00000419533 CTTNQ14247 550 aaKnown RBP9.16□□□□□ -0.94
UBR4-206ENST00000419533 LRRC41Q15345 812 aa9.16□□□□□ -0.94
UBR4-206ENST00000419533 ZNF449Q6P9G9 518 aa9.16□□□□□ -0.94
UBR4-206ENST00000419533 MICALL1Q8N3F8 863 aa9.16□□□□□ -0.94
UBR4-206ENST00000419533 MICAL1Q8TDZ2 1067 aa9.16□□□□□ -0.94
UBR4-206ENST00000419533 GTF3C2Q8WUA4 911 aaPredicted RBP9.16□□□□□ -0.94
UBR4-206ENST00000419533 SLC4A9Q96Q91 983 aa9.16□□□□□ -0.94
UBR4-206ENST00000419533 KIF9Q9HAQ2 790 aa9.16□□□□□ -0.94
UBR4-206ENST00000419533 DCP1AQ9NPI6 582 aaPredicted RBP9.16□□□□□ -0.94
UBR4-206ENST00000419533 TACC3Q9Y6A5 838 aa9.16□□□□□ -0.94
UBR4-206ENST00000419533 WDR19Q8NEZ3 1342 aa9.16□□□□□ -0.94
UBR4-206ENST00000419533 CLIC2O15247 247 aa9.15□□□□□ -0.94
UBR4-206ENST00000419533 GARSP41250 739 aaKnown RBP9.15□□□□□ -0.94
UBR4-206ENST00000419533 PRELPP51888 382 aa9.15□□□□□ -0.94
UBR4-206ENST00000419533 LDHDQ86WU2 507 aa9.15□□□□□ -0.94
UBR4-206ENST00000419533 TSC1Q92574 1164 aa9.15□□□□□ -0.94
UBR4-206ENST00000419533 MRFAP1L1Q96HT8 127 aa9.15□□□□□ -0.94
UBR4-206ENST00000419533 CFAP57Q96MR6 1250 aa9.15□□□□□ -0.94
UBR4-206ENST00000419533 BCL2L12Q9HB09 334 aa9.15□□□□□ -0.94
UBR4-206ENST00000419533 NXF1Q9UBU9 619 aaKnown RBP9.15□□□□□ -0.94
UBR4-206ENST00000419533 USP17L15C9J2P7 530 aa9.15□□□□□ -0.94
UBR4-206ENST00000419533 USP17L13C9JLJ4 530 aa9.15□□□□□ -0.94
UBR4-206ENST00000419533 USP17L11C9JVI0 530 aa9.15□□□□□ -0.94
UBR4-206ENST00000419533 USP17L18D6R9N7 530 aa9.15□□□□□ -0.94
UBR4-206ENST00000419533 USP17L22D6RA61 530 aa9.15□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms