RNA–Protein interactions for RNA: ENST00000419442.1

RAPGEF1-205, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

TSL 5

Gene RAPGEF1, Length 683 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-205ENST00000419442 ARHGAP4P98171 946 aa12.23□□□□□ -0.45
RAPGEF1-205ENST00000419442 PGM5Q15124 567 aa12.23□□□□□ -0.45
RAPGEF1-205ENST00000419442 QRICH1Q2TAL8 776 aa12.23□□□□□ -0.45
RAPGEF1-205ENST00000419442 TSHZ3Q63HK5 1081 aa12.23□□□□□ -0.45
RAPGEF1-205ENST00000419442 RUFY4Q6ZNE9 571 aa12.23□□□□□ -0.45
RAPGEF1-205ENST00000419442 IL31RAQ8NI17 732 aa12.23□□□□□ -0.45
RAPGEF1-205ENST00000419442 GPATCH3Q96I76 525 aa12.23□□□□□ -0.45
RAPGEF1-205ENST00000419442 AGO3Q9H9G7 860 aaKnown RBP12.23□□□□□ -0.45
RAPGEF1-205ENST00000419442 SUPT16HQ9Y5B9 1047 aaKnown RBP12.23□□□□□ -0.45
RAPGEF1-205ENST00000419442 SQORQ9Y6N5 450 aa12.23□□□□□ -0.45
RAPGEF1-205ENST00000419442 ACACBO00763 2458 aa12.23□□□□□ -0.45
RAPGEF1-205ENST00000419442 SPDYE4A6NLX3 237 aa12.22□□□□□ -0.45
RAPGEF1-205ENST00000419442 CFBP00751 764 aa12.22□□□□□ -0.45
RAPGEF1-205ENST00000419442 LMNAP02545 664 aaKnown RBP12.22□□□□□ -0.45
RAPGEF1-205ENST00000419442 STAG3L1P0CL83 205 aa12.22□□□□□ -0.45
RAPGEF1-205ENST00000419442 MYCLP12524 364 aaPredicted RBP12.22□□□□□ -0.45
RAPGEF1-205ENST00000419442 TECP42680 631 aa12.22□□□□□ -0.45
RAPGEF1-205ENST00000419442 ANGPT1Q15389 498 aa12.22□□□□□ -0.45
RAPGEF1-205ENST00000419442 PAN2Q504Q3 1202 aaKnown RBP12.22□□□□□ -0.45
RAPGEF1-205ENST00000419442 METTL7BQ6UX53 244 aa12.22□□□□□ -0.45
RAPGEF1-205ENST00000419442 TRIM50Q86XT4 487 aa12.22□□□□□ -0.45
RAPGEF1-205ENST00000419442 ADGRF4Q8IZF3 695 aa12.22□□□□□ -0.45
RAPGEF1-205ENST00000419442 ZDHHC14Q8IZN3 488 aa12.22□□□□□ -0.45
RAPGEF1-205ENST00000419442 SAMD3Q8N6K7 520 aa12.22□□□□□ -0.45
RAPGEF1-205ENST00000419442 MICAL1Q8TDZ2 1067 aa12.22□□□□□ -0.45
RAPGEF1-205ENST00000419442 NECTIN4Q96NY8 510 aa12.22□□□□□ -0.45
RAPGEF1-205ENST00000419442 GPR20Q99678 358 aa12.22□□□□□ -0.45
RAPGEF1-205ENST00000419442 FTHL17Q9BXU8 183 aa12.22□□□□□ -0.45
RAPGEF1-205ENST00000419442 ZNF215Q9UL58 517 aaPredicted RBP12.22□□□□□ -0.45
RAPGEF1-205ENST00000419442 DDX19BQ9UMR2 479 aa12.22□□□□□ -0.45
RAPGEF1-205ENST00000419442 MBLAC1A4D2B0 266 aaPredicted RBP12.21□□□□□ -0.45
RAPGEF1-205ENST00000419442 NPR3P17342 541 aa12.21□□□□□ -0.45
RAPGEF1-205ENST00000419442 SP100P23497 879 aaPredicted RBP12.21□□□□□ -0.45
RAPGEF1-205ENST00000419442 RRP12Q5JTH9 1297 aaKnown RBP12.21□□□□□ -0.45
RAPGEF1-205ENST00000419442 VPS53Q5VIR6 699 aa12.21□□□□□ -0.45
RAPGEF1-205ENST00000419442 RSPH3Q86UC2 560 aa12.21□□□□□ -0.45
RAPGEF1-205ENST00000419442 DTWD2Q8NBA8 298 aa12.21□□□□□ -0.45
RAPGEF1-205ENST00000419442 MFSD1Q9H3U5 465 aa12.21□□□□□ -0.45
RAPGEF1-205ENST00000419442 POMKQ9H5K3 350 aa12.21□□□□□ -0.45
RAPGEF1-205ENST00000419442 LZTS1Q9Y250 596 aa12.21□□□□□ -0.45
RAPGEF1-205ENST00000419442 PCDHB12Q9Y5F1 795 aa12.21□□□□□ -0.45
RAPGEF1-205ENST00000419442 CDY2AQ9Y6F7 541 aa12.21□□□□□ -0.45
RAPGEF1-205ENST00000419442 DNAH14Q0VDD8 3507 aa12.2□□□□□ -0.46
RAPGEF1-205ENST00000419442 NOP56O00567 594 aaKnown RBP12.2□□□□□ -0.46
RAPGEF1-205ENST00000419442 PI15O43692 258 aa12.2□□□□□ -0.46
RAPGEF1-205ENST00000419442 PPFIA3O75145 1194 aa12.2□□□□□ -0.46
RAPGEF1-205ENST00000419442 FGF18O76093 207 aa12.2□□□□□ -0.46
RAPGEF1-205ENST00000419442 ARP10275 920 aa12.2□□□□□ -0.46
RAPGEF1-205ENST00000419442 MS4A1P11836 297 aa12.2□□□□□ -0.46
RAPGEF1-205ENST00000419442 SCG2P13521 617 aa12.2□□□□□ -0.46
RAPGEF1-205ENST00000419442 CCND2P30279 289 aa12.2□□□□□ -0.46
RAPGEF1-205ENST00000419442 CD52P31358 61 aa12.2□□□□□ -0.46
RAPGEF1-205ENST00000419442 GATMP50440 423 aa12.2□□□□□ -0.46
RAPGEF1-205ENST00000419442 SEMA3FQ13275 785 aa12.2□□□□□ -0.46
RAPGEF1-205ENST00000419442 NEDD9Q14511 834 aa12.2□□□□□ -0.46
RAPGEF1-205ENST00000419442 DGKHQ86XP1 1220 aa12.2□□□□□ -0.46
RAPGEF1-205ENST00000419442 KIAA2013Q8IYS2 634 aa12.2□□□□□ -0.46
RAPGEF1-205ENST00000419442 INPP4AQ96PE3 977 aaPredicted RBP12.2□□□□□ -0.46
RAPGEF1-205ENST00000419442 RTP3Q9BQQ7 232 aa12.2□□□□□ -0.46
RAPGEF1-205ENST00000419442 ADAM7Q9H2U9 754 aa12.2□□□□□ -0.46
RAPGEF1-205ENST00000419442 JMJD4Q9H9V9 463 aa12.2□□□□□ -0.46
RAPGEF1-205ENST00000419442 AAASQ9NRG9 546 aa12.2□□□□□ -0.46
RAPGEF1-205ENST00000419442 TOMM22Q9NS69 142 aa12.2□□□□□ -0.46
RAPGEF1-205ENST00000419442 CDH22Q9UJ99 828 aa12.2□□□□□ -0.46
RAPGEF1-205ENST00000419442 ZMYM6O95789 1325 aa12.19□□□□□ -0.46
RAPGEF1-205ENST00000419442 FRMPD4Q14CM0 1322 aa12.19□□□□□ -0.46
RAPGEF1-205ENST00000419442 TTC41PQ6P2S7 1318 aa12.19□□□□□ -0.46
RAPGEF1-205ENST00000419442 LAMA4Q16363 1823 aa12.19□□□□□ -0.46
RAPGEF1-205ENST00000419442 RPLP2P05387 115 aaKnown RBP12.19□□□□□ -0.46
RAPGEF1-205ENST00000419442 ASGR2P07307 311 aa12.19□□□□□ -0.46
RAPGEF1-205ENST00000419442 PCP11498 1178 aaKnown RBP12.19□□□□□ -0.46
RAPGEF1-205ENST00000419442 MRPS6P82932 125 aaKnown RBP12.19□□□□□ -0.46
RAPGEF1-205ENST00000419442 PLCB3Q01970 1234 aa12.19□□□□□ -0.46
RAPGEF1-205ENST00000419442 ITIH3Q06033 890 aa12.19□□□□□ -0.46
RAPGEF1-205ENST00000419442 TPRNQ4KMQ1 711 aa12.19□□□□□ -0.46
RAPGEF1-205ENST00000419442 ASPRV1Q53RT3 343 aa12.19□□□□□ -0.46
RAPGEF1-205ENST00000419442 FAM43BQ6ZT52 329 aaPredicted RBP12.19□□□□□ -0.46
RAPGEF1-205ENST00000419442 PI4K2BQ8TCG2 481 aa12.19□□□□□ -0.46
RAPGEF1-205ENST00000419442 DNAJB3Q8WWF6 145 aa12.19□□□□□ -0.46
RAPGEF1-205ENST00000419442 CASP10Q92851 521 aa12.19□□□□□ -0.46
RAPGEF1-205ENST00000419442 APOL5Q9BWW9 433 aa12.19□□□□□ -0.46
RAPGEF1-205ENST00000419442 AMNQ9BXJ7 453 aa12.19□□□□□ -0.46
RAPGEF1-205ENST00000419442 TSHZ2Q9NRE2 1034 aa12.19□□□□□ -0.46
RAPGEF1-205ENST00000419442 USTQ9Y2C2 406 aa12.19□□□□□ -0.46
RAPGEF1-205ENST00000419442 TELO2Q9Y4R8 837 aa12.19□□□□□ -0.46
RAPGEF1-205ENST00000419442 MAP1BP46821 2468 aaKnown RBP12.18□□□□□ -0.46
RAPGEF1-205ENST00000419442 CACNA1GO43497 2377 aa12.18□□□□□ -0.46
RAPGEF1-205ENST00000419442 SPATA31C2B4DYI2 1134 aa12.18□□□□□ -0.46
RAPGEF1-205ENST00000419442 FGAP02671 866 aa12.18□□□□□ -0.46
RAPGEF1-205ENST00000419442 MTHFRP42898 656 aa12.18□□□□□ -0.46
RAPGEF1-205ENST00000419442 MRPS9P82933 396 aaKnown RBP12.18□□□□□ -0.46
RAPGEF1-205ENST00000419442 GNPTABQ3T906 1256 aa12.18□□□□□ -0.46
RAPGEF1-205ENST00000419442 MARCH8Q5T0T0 291 aa12.18□□□□□ -0.46
RAPGEF1-205ENST00000419442 CES5AQ6NT32 575 aa12.18□□□□□ -0.46
RAPGEF1-205ENST00000419442 CYFIP1Q7L576 1253 aa12.18□□□□□ -0.46
RAPGEF1-205ENST00000419442 PLCD3Q8N3E9 789 aa12.18□□□□□ -0.46
RAPGEF1-205ENST00000419442 TDRD5Q8NAT2 981 aaKnown RBP12.18□□□□□ -0.46
RAPGEF1-205ENST00000419442 COLGALT1Q8NBJ5 622 aa12.18□□□□□ -0.46
RAPGEF1-205ENST00000419442 PNMA1Q8ND90 353 aa12.18□□□□□ -0.46
RAPGEF1-205ENST00000419442 FLCNQ8NFG4 579 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 64.9 ms