RNA–Protein interactions for RNA: ENST00000419378.5

HMGN1-205, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 850 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-205ENST00000419378 ALAS2P22557 587 aa8.18□□□□□ -1.1
HMGN1-205ENST00000419378 MAPK4P31152 587 aa8.18□□□□□ -1.1
HMGN1-205ENST00000419378 TFAP4Q01664 338 aa8.18□□□□□ -1.1
HMGN1-205ENST00000419378 COG2Q14746 738 aa8.18□□□□□ -1.1
HMGN1-205ENST00000419378 FAM47AQ5JRC9 791 aa8.18□□□□□ -1.1
HMGN1-205ENST00000419378 LCE2CQ5TA81 110 aa8.18□□□□□ -1.1
HMGN1-205ENST00000419378 CWC27Q6UX04 472 aaKnown RBP8.18□□□□□ -1.1
HMGN1-205ENST00000419378 DTHD1Q6ZMT9 781 aa8.18□□□□□ -1.1
HMGN1-205ENST00000419378 C1orf229Q6ZS94 237 aaPredicted RBP8.18□□□□□ -1.1
HMGN1-205ENST00000419378 NEDD1Q8NHV4 660 aa8.18□□□□□ -1.1
HMGN1-205ENST00000419378 ASAP3Q8TDY4 903 aa8.18□□□□□ -1.1
HMGN1-205ENST00000419378 CEP95Q96GE4 821 aa8.18□□□□□ -1.1
HMGN1-205ENST00000419378 LPIN3Q9BQK8 851 aa8.18□□□□□ -1.1
HMGN1-205ENST00000419378 MTMR4Q9NYA4 1195 aa8.18□□□□□ -1.1
HMGN1-205ENST00000419378 BTBD7Q9P203 1132 aa8.18□□□□□ -1.1
HMGN1-205ENST00000419378 NYAP2Q9P242 653 aa8.18□□□□□ -1.1
HMGN1-205ENST00000419378 ANAPC4Q9UJX5 808 aa8.18□□□□□ -1.1
HMGN1-205ENST00000419378 TACC3Q9Y6A5 838 aa8.18□□□□□ -1.1
HMGN1-205ENST00000419378 MYH4Q9Y623 1939 aa8.18□□□□□ -1.1
HMGN1-205ENST00000419378 ORC4O43929 436 aa8.17□□□□□ -1.1
HMGN1-205ENST00000419378 ADCY3O60266 1144 aa8.17□□□□□ -1.1
HMGN1-205ENST00000419378 TTLL1O95922 423 aa8.17□□□□□ -1.1
HMGN1-205ENST00000419378 NDUFB10O96000 172 aa8.17□□□□□ -1.1
HMGN1-205ENST00000419378 EPXP11678 715 aa8.17□□□□□ -1.1
HMGN1-205ENST00000419378 CCNA1P78396 465 aa8.17□□□□□ -1.1
HMGN1-205ENST00000419378 FAM83BQ5T0W9 1011 aa8.17□□□□□ -1.1
HMGN1-205ENST00000419378 PSAPL1Q6NUJ1 521 aa8.17□□□□□ -1.1
HMGN1-205ENST00000419378 GPR142Q7Z601 462 aa8.17□□□□□ -1.1
HMGN1-205ENST00000419378 CCAR1Q8IX12 1150 aaKnown RBP8.17□□□□□ -1.1
HMGN1-205ENST00000419378 LRRC47Q8N1G4 583 aaKnown RBP8.17□□□□□ -1.1
HMGN1-205ENST00000419378 SOCS4Q8WXH5 440 aa8.17□□□□□ -1.1
HMGN1-205ENST00000419378 ATG4CQ96DT6 458 aa8.17□□□□□ -1.1
HMGN1-205ENST00000419378 INCENPQ9NQS7 918 aa8.17□□□□□ -1.1
HMGN1-205ENST00000419378 HOXC10Q9NYD6 342 aa8.17□□□□□ -1.1
HMGN1-205ENST00000419378 CLIP2Q9UDT6 1046 aa8.17□□□□□ -1.1
HMGN1-205ENST00000419378 GJD2Q9UKL4 321 aa8.17□□□□□ -1.1
HMGN1-205ENST00000419378 SYNPO2Q9UMS6 1093 aa8.17□□□□□ -1.1
HMGN1-205ENST00000419378 TRIM33Q9UPN9 1127 aa8.17□□□□□ -1.1
HMGN1-205ENST00000419378 STARD13Q9Y3M8 1113 aa8.17□□□□□ -1.1
HMGN1-205ENST00000419378 A0A096LPE4 126 aa8.16□□□□□ -1.1
HMGN1-205ENST00000419378 A0A1W2PPZ6 126 aa8.16□□□□□ -1.1
HMGN1-205ENST00000419378 TSPY2A6NKD2 308 aa8.16□□□□□ -1.1
HMGN1-205ENST00000419378 F5H6K3 240 aa8.16□□□□□ -1.1
HMGN1-205ENST00000419378 RANBP6O60518 1105 aaKnown RBP8.16□□□□□ -1.1
HMGN1-205ENST00000419378 FGRP09769 529 aa8.16□□□□□ -1.1
HMGN1-205ENST00000419378 COL11A1P12107 1806 aaPredicted RBP8.16□□□□□ -1.1
HMGN1-205ENST00000419378 CCL5P13501 91 aa8.16□□□□□ -1.1
HMGN1-205ENST00000419378 ZNF76P36508 570 aa8.16□□□□□ -1.1
HMGN1-205ENST00000419378 GMPRP36959 345 aa8.16□□□□□ -1.1
HMGN1-205ENST00000419378 HAND2P61296 217 aa8.16□□□□□ -1.1
HMGN1-205ENST00000419378 UBXN2AP68543 259 aa8.16□□□□□ -1.1
HMGN1-205ENST00000419378 FANCCQ00597 558 aa8.16□□□□□ -1.1
HMGN1-205ENST00000419378 KLRC3Q07444 240 aa8.16□□□□□ -1.1
HMGN1-205ENST00000419378 WDR78Q5VTH9 848 aa8.16□□□□□ -1.1
HMGN1-205ENST00000419378 PDE4DIPQ5VU43 2346 aa8.16□□□□□ -1.1
HMGN1-205ENST00000419378 ADAMTSL4Q6UY14 1074 aa8.16□□□□□ -1.1
HMGN1-205ENST00000419378 CENPQQ7L2Z9 268 aaPredicted RBP8.16□□□□□ -1.1
HMGN1-205ENST00000419378 PLEKHH3Q7Z736 793 aa8.16□□□□□ -1.1
HMGN1-205ENST00000419378 TBC1D10CQ8IV04 446 aa8.16□□□□□ -1.1
HMGN1-205ENST00000419378 MB21D1Q8N884 522 aa8.16□□□□□ -1.1
HMGN1-205ENST00000419378 NUDT8Q8WV74 236 aa8.16□□□□□ -1.1
HMGN1-205ENST00000419378 TRIB2Q92519 343 aa8.16□□□□□ -1.1
HMGN1-205ENST00000419378 RAD50Q92878 1312 aa8.16□□□□□ -1.1
HMGN1-205ENST00000419378 MKL1Q969V6 931 aa8.16□□□□□ -1.1
HMGN1-205ENST00000419378 NUP88Q99567 741 aaPredicted RBP8.16□□□□□ -1.1
HMGN1-205ENST00000419378 IL25Q9H293 177 aa8.16□□□□□ -1.1
HMGN1-205ENST00000419378 CWC22Q9HCG8 908 aaKnown RBP8.16□□□□□ -1.1
HMGN1-205ENST00000419378 FBXO28Q9NVF7 368 aa8.16□□□□□ -1.1
HMGN1-205ENST00000419378 FRRS1LQ9P0K9 344 aa8.16□□□□□ -1.1
HMGN1-205ENST00000419378 ZNF236Q9UL36 1845 aa8.16□□□□□ -1.1
HMGN1-205ENST00000419378 PPP1R9AQ9ULJ8 1098 aa8.16□□□□□ -1.1
HMGN1-205ENST00000419378 NMT2O60551 498 aa8.15□□□□□ -1.1
HMGN1-205ENST00000419378 RGS9O75916 674 aaPredicted RBP8.15□□□□□ -1.1
HMGN1-205ENST00000419378 WFS1O76024 890 aa8.15□□□□□ -1.1
HMGN1-205ENST00000419378 HMGCRP04035 888 aa8.15□□□□□ -1.1
HMGN1-205ENST00000419378 PCP11498 1178 aaKnown RBP8.15□□□□□ -1.1
HMGN1-205ENST00000419378 XRCC5P13010 732 aaKnown RBP8.15□□□□□ -1.1
HMGN1-205ENST00000419378 EN2P19622 333 aaPredicted RBP8.15□□□□□ -1.1
HMGN1-205ENST00000419378 CYP2B6P20813 491 aa8.15□□□□□ -1.1
HMGN1-205ENST00000419378 RGS2P41220 211 aa8.15□□□□□ -1.1
HMGN1-205ENST00000419378 NOVP48745 357 aa8.15□□□□□ -1.1
HMGN1-205ENST00000419378 TMEM132BQ14DG7 1078 aa8.15□□□□□ -1.1
HMGN1-205ENST00000419378 RRP12Q5JTH9 1297 aaKnown RBP8.15□□□□□ -1.1
HMGN1-205ENST00000419378 AKNAD1Q5T1N1 836 aa8.15□□□□□ -1.1
HMGN1-205ENST00000419378 GMCL1P1Q8NEA9 526 aa8.15□□□□□ -1.1
HMGN1-205ENST00000419378 SHCBP1Q8NEM2 672 aa8.15□□□□□ -1.1
HMGN1-205ENST00000419378 STAG1Q8WVM7 1258 aa8.15□□□□□ -1.1
HMGN1-205ENST00000419378 USP6NLQ92738 828 aa8.15□□□□□ -1.1
HMGN1-205ENST00000419378 RNF34Q969K3 372 aa8.15□□□□□ -1.1
HMGN1-205ENST00000419378 SHISA4Q96DD7 197 aa8.15□□□□□ -1.1
HMGN1-205ENST00000419378 APBA2Q99767 749 aa8.15□□□□□ -1.1
HMGN1-205ENST00000419378 SLF1Q9BQI6 1058 aa8.15□□□□□ -1.1
HMGN1-205ENST00000419378 DSCC1Q9BVC3 393 aa8.15□□□□□ -1.1
HMGN1-205ENST00000419378 MOV10L1Q9BXT6 1211 aaKnown RBP8.15□□□□□ -1.1
HMGN1-205ENST00000419378 LACRTQ9GZZ8 138 aa8.15□□□□□ -1.1
HMGN1-205ENST00000419378 SPATC1LQ9H0A9 340 aa8.15□□□□□ -1.1
HMGN1-205ENST00000419378 RNF208Q9H0X6 261 aa8.15□□□□□ -1.1
HMGN1-205ENST00000419378 IL17RBQ9NRM6 502 aa8.15□□□□□ -1.1
HMGN1-205ENST00000419378 METTL5Q9NRN9 209 aaKnown RBP8.15□□□□□ -1.1
HMGN1-205ENST00000419378 TOMM22Q9NS69 142 aa8.15□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms