RNA–Protein interactions for RNA: ENST00000418336.6

PKNOX1-202, Transcript of PBX/knotted 1 homeobox 1, humanhuman

TSL 2

Gene PKNOX1, Length 459 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-202ENST00000418336 CCDC60Q8IWA6 550 aaPredicted RBP23.43■■□□□ 1.34
PKNOX1-202ENST00000418336 CCDC155Q8N6L0 562 aa23.43■■□□□ 1.34
PKNOX1-202ENST00000418336 GUCD1Q96NT3 240 aa23.43■■□□□ 1.34
PKNOX1-202ENST00000418336 ORC3Q9UBD5 711 aaPredicted RBP23.43■■□□□ 1.34
PKNOX1-202ENST00000418336 TDP2O95551 362 aa23.42■■□□□ 1.34
PKNOX1-202ENST00000418336 ATP4AP20648 1035 aa23.42■■□□□ 1.34
PKNOX1-202ENST00000418336 MARK3P27448 753 aa23.42■■□□□ 1.34
PKNOX1-202ENST00000418336 PLCB4Q15147 1175 aa23.42■■□□□ 1.34
PKNOX1-202ENST00000418336 Q4G0T1 1027 aa23.42■■□□□ 1.34
PKNOX1-202ENST00000418336 B3GNT9Q6UX72 402 aa23.42■■□□□ 1.34
PKNOX1-202ENST00000418336 RUFY4Q6ZNE9 571 aa23.42■■□□□ 1.34
PKNOX1-202ENST00000418336 ZNF577Q9BSK1 485 aa23.42■■□□□ 1.34
PKNOX1-202ENST00000418336 PBX4Q9BYU1 374 aa23.42■■□□□ 1.34
PKNOX1-202ENST00000418336 CHD7Q9P2D1 2997 aa23.42■■□□□ 1.34
PKNOX1-202ENST00000418336 EYSQ5T1H1 3165 aa23.42■■□□□ 1.34
PKNOX1-202ENST00000418336 WDR81Q562E7 1941 aa23.41■■□□□ 1.34
PKNOX1-202ENST00000418336 DDX39AO00148 427 aaKnown RBP23.41■■□□□ 1.34
PKNOX1-202ENST00000418336 RPAINQ86UA6 219 aa23.41■■□□□ 1.34
PKNOX1-202ENST00000418336 SLC5A5Q92911 643 aa23.41■■□□□ 1.34
PKNOX1-202ENST00000418336 ZBTB10Q96DT7 871 aa23.41■■□□□ 1.34
PKNOX1-202ENST00000418336 TBC1D22BQ9NU19 505 aa23.41■■□□□ 1.34
PKNOX1-202ENST00000418336 DNAJB2P25686 324 aa23.4■■□□□ 1.34
PKNOX1-202ENST00000418336 STAT5BP51692 787 aa23.4■■□□□ 1.34
PKNOX1-202ENST00000418336 PPFIA1Q13136 1202 aa23.4■■□□□ 1.34
PKNOX1-202ENST00000418336 GRIK4Q16099 956 aa23.4■■□□□ 1.34
PKNOX1-202ENST00000418336 FAM26DQ5JW98 314 aa23.4■■□□□ 1.34
PKNOX1-202ENST00000418336 ZNF746Q6NUN9 644 aaPredicted RBP23.4■■□□□ 1.34
PKNOX1-202ENST00000418336 MOXD1Q6UVY6 613 aa23.4■■□□□ 1.34
PKNOX1-202ENST00000418336 ETNPPLQ8TBG4 499 aa23.4■■□□□ 1.34
PKNOX1-202ENST00000418336 GLG1Q92896 1179 aa23.4■■□□□ 1.34
PKNOX1-202ENST00000418336 GJA10Q969M2 543 aa23.4■■□□□ 1.34
PKNOX1-202ENST00000418336 SEMA6BQ9H3T3 888 aa23.4■■□□□ 1.34
PKNOX1-202ENST00000418336 LIMCH1Q9UPQ0 1083 aa23.4■■□□□ 1.34
PKNOX1-202ENST00000418336 KAT6AQ92794 2004 aa23.39■■□□□ 1.34
PKNOX1-202ENST00000418336 FAM205CA6NFA0 338 aa23.39■■□□□ 1.33
PKNOX1-202ENST00000418336 ZBTB42B2RXF5 422 aa23.39■■□□□ 1.33
PKNOX1-202ENST00000418336 CAND2O75155 1236 aa23.39■■□□□ 1.33
PKNOX1-202ENST00000418336 INSRRP14616 1297 aa23.39■■□□□ 1.33
PKNOX1-202ENST00000418336 THPOP40225 353 aa23.39■■□□□ 1.33
PKNOX1-202ENST00000418336 MGAT3Q09327 533 aa23.39■■□□□ 1.33
PKNOX1-202ENST00000418336 NONOQ15233 471 aaKnown RBP eCLIP23.39■■□□□ 1.336e-7■■■■■ 34
PKNOX1-202ENST00000418336 KRT25Q7Z3Z0 450 aa23.39■■□□□ 1.33
PKNOX1-202ENST00000418336 YBX2Q9Y2T7 364 aaKnown RBP23.39■■□□□ 1.33
PKNOX1-202ENST00000418336 MAFBQ9Y5Q3 323 aaPredicted RBP23.39■■□□□ 1.33
PKNOX1-202ENST00000418336 SLC37A4O43826 429 aa23.38■■□□□ 1.33
PKNOX1-202ENST00000418336 PSMD10O75832 226 aa23.38■■□□□ 1.33
PKNOX1-202ENST00000418336 PARNO95453 639 aaKnown RBP23.38■■□□□ 1.33
PKNOX1-202ENST00000418336 GNAT1P11488 350 aa23.38■■□□□ 1.33
PKNOX1-202ENST00000418336 INF2Q27J81 1249 aa23.38■■□□□ 1.33
PKNOX1-202ENST00000418336 RIT2Q99578 217 aa23.38■■□□□ 1.33
PKNOX1-202ENST00000418336 IGSF9BQ9UPX0 1349 aa23.37■■□□□ 1.33
PKNOX1-202ENST00000418336 TMEM265A0A087WTH1 108 aa23.37■■□□□ 1.33
PKNOX1-202ENST00000418336 RSPH10B2B2RC85 870 aa23.37■■□□□ 1.33
PKNOX1-202ENST00000418336 RSPH10BP0C881 870 aa23.37■■□□□ 1.33
PKNOX1-202ENST00000418336 NR5A1Q13285 461 aa23.37■■□□□ 1.33
PKNOX1-202ENST00000418336 WASF1Q92558 559 aa23.37■■□□□ 1.33
PKNOX1-202ENST00000418336 BAIAP3O94812 1187 aa23.36■■□□□ 1.33
PKNOX1-202ENST00000418336 CHRNA1P02708 482 aa23.36■■□□□ 1.33
PKNOX1-202ENST00000418336 SLC26A2P50443 739 aa23.36■■□□□ 1.33
PKNOX1-202ENST00000418336 KRT76Q01546 638 aa23.36■■□□□ 1.33
PKNOX1-202ENST00000418336 SWSAP1Q6NVH7 229 aa23.36■■□□□ 1.33
PKNOX1-202ENST00000418336 CNKSR3Q6P9H4 555 aa23.36■■□□□ 1.33
PKNOX1-202ENST00000418336 CCDC83Q8IWF9 413 aa23.36■■□□□ 1.33
PKNOX1-202ENST00000418336 SMAP1Q8IYB5 467 aaPredicted RBP23.36■■□□□ 1.33
PKNOX1-202ENST00000418336 TRAPPC12Q8WVT3 735 aa23.36■■□□□ 1.33
PKNOX1-202ENST00000418336 FAM161BQ96MY7 647 aa23.36■■□□□ 1.33
PKNOX1-202ENST00000418336 AZI2Q9H6S1 392 aa23.36■■□□□ 1.33
PKNOX1-202ENST00000418336 TUBE1Q9UJT0 475 aa23.36■■□□□ 1.33
PKNOX1-202ENST00000418336 CD2BP2O95400 341 aaKnown RBP23.35■■□□□ 1.33
PKNOX1-202ENST00000418336 MMP1P03956 469 aa23.35■■□□□ 1.33
PKNOX1-202ENST00000418336 RABGGTBP53611 331 aa23.35■■□□□ 1.33
PKNOX1-202ENST00000418336 WDR5P61964 334 aaKnown RBP23.35■■□□□ 1.33
PKNOX1-202ENST00000418336 PLEKHG4Q58EX7 1191 aa23.35■■□□□ 1.33
PKNOX1-202ENST00000418336 ZNF697Q5TEC3 545 aa23.35■■□□□ 1.33
PKNOX1-202ENST00000418336 PPP4R3AQ6IN85 833 aa23.35■■□□□ 1.33
PKNOX1-202ENST00000418336 MIS18BP1Q6P0N0 1132 aa23.35■■□□□ 1.33
PKNOX1-202ENST00000418336 ATP8B4Q8TF62 1192 aa23.35■■□□□ 1.33
PKNOX1-202ENST00000418336 FTOQ9C0B1 505 aaKnown RBP eCLIP23.35■■□□□ 1.33
PKNOX1-202ENST00000418336 MTIF3Q9H2K0 278 aaKnown RBP23.35■■□□□ 1.33
PKNOX1-202ENST00000418336 UNC45AQ9H3U1 944 aa23.35■■□□□ 1.33
PKNOX1-202ENST00000418336 KCNMB3Q9NPA1 279 aa23.35■■□□□ 1.33
PKNOX1-202ENST00000418336 ZNF302Q9NR11 478 aa23.35■■□□□ 1.33
PKNOX1-202ENST00000418336 SLC4A7Q9Y6M7 1214 aa23.35■■□□□ 1.33
PKNOX1-202ENST00000418336 MICAL3Q7RTP6 2002 aa23.35■■□□□ 1.33
PKNOX1-202ENST00000418336 POTEB3A0JP26 581 aa23.34■■□□□ 1.33
PKNOX1-202ENST00000418336 RRN3P2A6NIE6 340 aa23.34■■□□□ 1.33
PKNOX1-202ENST00000418336 WNT7AO00755 349 aa23.34■■□□□ 1.33
PKNOX1-202ENST00000418336 ZNF862O60290 1169 aa23.34■■□□□ 1.33
PKNOX1-202ENST00000418336 MYOGP15173 224 aa23.34■■□□□ 1.33
PKNOX1-202ENST00000418336 KRT40Q6A162 431 aa23.34■■□□□ 1.33
PKNOX1-202ENST00000418336 TAF2Q6P1X5 1199 aa23.34■■□□□ 1.33
PKNOX1-202ENST00000418336 POTEBQ6S5H4 581 aa23.34■■□□□ 1.33
PKNOX1-202ENST00000418336 PIK3AP1Q6ZUJ8 805 aa23.34■■□□□ 1.33
PKNOX1-202ENST00000418336 TIFAQ96CG3 184 aa23.34■■□□□ 1.33
PKNOX1-202ENST00000418336 PCDHA10Q9Y5I2 948 aa23.34■■□□□ 1.33
PKNOX1-202ENST00000418336 ZBBXA8MT70 800 aa23.33■■□□□ 1.33
PKNOX1-202ENST00000418336 ARHGEF15O94989 841 aa23.33■■□□□ 1.33
PKNOX1-202ENST00000418336 CTSHP09668 335 aa23.33■■□□□ 1.33
PKNOX1-202ENST00000418336 ACTN1P12814 892 aa23.33■■□□□ 1.33
PKNOX1-202ENST00000418336 ATP2A2P16615 1042 aaKnown RBP23.33■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms