RNA–Protein interactions for RNA: ENST00000417540.5

HDLBP-206, Transcript of high density lipoprotein binding protein, humanhuman

TSL 4

Gene HDLBP, Length 525 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-206ENST00000417540 PPFIA1Q13136 1202 aa11.63□□□□□ -0.55
HDLBP-206ENST00000417540 PLCB4Q15147 1175 aa11.63□□□□□ -0.55
HDLBP-206ENST00000417540 GRIK4Q16099 956 aa11.63□□□□□ -0.55
HDLBP-206ENST00000417540 INF2Q27J81 1249 aa11.63□□□□□ -0.55
HDLBP-206ENST00000417540 CAGE1Q8TC20 777 aa11.63□□□□□ -0.55
HDLBP-206ENST00000417540 AFAP1L1Q8TED9 768 aa11.63□□□□□ -0.55
HDLBP-206ENST00000417540 CCDC12Q8WUD4 166 aaPredicted RBP11.63□□□□□ -0.55
HDLBP-206ENST00000417540 MYLIPQ8WY64 445 aa11.63□□□□□ -0.55
HDLBP-206ENST00000417540 ATP6V0A1Q93050 837 aa11.63□□□□□ -0.55
HDLBP-206ENST00000417540 PPP1R16BQ96T49 567 aa11.63□□□□□ -0.55
HDLBP-206ENST00000417540 NKX2-4Q9H2Z4 354 aa11.63□□□□□ -0.55
HDLBP-206ENST00000417540 ORC3Q9UBD5 711 aaPredicted RBP11.63□□□□□ -0.55
HDLBP-206ENST00000417540 MYH15Q9Y2K3 1946 aa11.62□□□□□ -0.55
HDLBP-206ENST00000417540 RALGAPA2Q2PPJ7 1873 aa11.62□□□□□ -0.55
HDLBP-206ENST00000417540 LCHNA4D1U4 455 aa11.62□□□□□ -0.55
HDLBP-206ENST00000417540 FOSP01100 380 aaPredicted RBP11.62□□□□□ -0.55
HDLBP-206ENST00000417540 CYP3A4P08684 503 aa11.62□□□□□ -0.55
HDLBP-206ENST00000417540 SUPT20HL2P0C7V6 817 aa11.62□□□□□ -0.55
HDLBP-206ENST00000417540 SELPP16109 830 aa11.62□□□□□ -0.55
HDLBP-206ENST00000417540 ATP4AP20648 1035 aa11.62□□□□□ -0.55
HDLBP-206ENST00000417540 ZNF76P36508 570 aa11.62□□□□□ -0.55
HDLBP-206ENST00000417540 SMAD3P84022 425 aaKnown RBP11.62□□□□□ -0.55
HDLBP-206ENST00000417540 SETQ01105 290 aaPredicted RBP11.62□□□□□ -0.55
HDLBP-206ENST00000417540 MGAT3Q09327 533 aa11.62□□□□□ -0.55
HDLBP-206ENST00000417540 PTK7Q13308 1070 aa11.62□□□□□ -0.55
HDLBP-206ENST00000417540 BFSP2Q13515 415 aa11.62□□□□□ -0.55
HDLBP-206ENST00000417540 MARCH8Q5T0T0 291 aa11.62□□□□□ -0.55
HDLBP-206ENST00000417540 ZNF697Q5TEC3 545 aa11.62□□□□□ -0.55
HDLBP-206ENST00000417540 GPR153Q6NV75 609 aa11.62□□□□□ -0.55
HDLBP-206ENST00000417540 TRMT1LQ7Z2T5 733 aaKnown RBP11.62□□□□□ -0.55
HDLBP-206ENST00000417540 POTEDQ86YR6 584 aa11.62□□□□□ -0.55
HDLBP-206ENST00000417540 BLIDQ8IZY5 108 aa11.62□□□□□ -0.55
HDLBP-206ENST00000417540 TNFRSF25Q93038 417 aa11.62□□□□□ -0.55
HDLBP-206ENST00000417540 CDHR1Q96JP9 859 aa11.62□□□□□ -0.55
HDLBP-206ENST00000417540 SDF4Q9BRK5 362 aa11.62□□□□□ -0.55
HDLBP-206ENST00000417540 ZNF577Q9BSK1 485 aa11.62□□□□□ -0.55
HDLBP-206ENST00000417540 UNC45AQ9H3U1 944 aa11.62□□□□□ -0.55
HDLBP-206ENST00000417540 ZNF215Q9UL58 517 aaPredicted RBP11.62□□□□□ -0.55
HDLBP-206ENST00000417540 EPOPA6NHQ4 379 aa11.61□□□□□ -0.55
HDLBP-206ENST00000417540 ZBTB42B2RXF5 422 aa11.61□□□□□ -0.55
HDLBP-206ENST00000417540 IPO5O00410 1097 aaKnown RBP11.61□□□□□ -0.55
HDLBP-206ENST00000417540 PPFIA4O75335 1185 aa11.61□□□□□ -0.55
HDLBP-206ENST00000417540 GNA11P29992 359 aa11.61□□□□□ -0.55
HDLBP-206ENST00000417540 CIITAP33076 1130 aa11.61□□□□□ -0.55
HDLBP-206ENST00000417540 WDR5P61964 334 aaKnown RBP11.61□□□□□ -0.55
HDLBP-206ENST00000417540 TMEM62Q0P6H9 643 aa11.61□□□□□ -0.55
HDLBP-206ENST00000417540 MKRN4PQ13434 485 aaPredicted RBP11.61□□□□□ -0.55
HDLBP-206ENST00000417540 PIK3AP1Q6ZUJ8 805 aa11.61□□□□□ -0.55
HDLBP-206ENST00000417540 NIPA1Q7RTP0 329 aa11.61□□□□□ -0.55
HDLBP-206ENST00000417540 ETNPPLQ8TBG4 499 aa11.61□□□□□ -0.55
HDLBP-206ENST00000417540 LINC01599Q8WXQ3 324 aa11.61□□□□□ -0.55
HDLBP-206ENST00000417540 SEPT1Q8WYJ6 367 aa11.61□□□□□ -0.55
HDLBP-206ENST00000417540 GLG1Q92896 1179 aa11.61□□□□□ -0.55
HDLBP-206ENST00000417540 C22orf23Q9BZE7 217 aa11.61□□□□□ -0.55
HDLBP-206ENST00000417540 FAM49AQ9H0Q0 323 aaPredicted RBP11.61□□□□□ -0.55
HDLBP-206ENST00000417540 TUBE1Q9UJT0 475 aa11.61□□□□□ -0.55
HDLBP-206ENST00000417540 TRPC6Q9Y210 931 aa11.61□□□□□ -0.55
HDLBP-206ENST00000417540 C5orf42Q9H799 3197 aa11.61□□□□□ -0.55
HDLBP-206ENST00000417540 MYO9BQ13459 2157 aa11.6□□□□□ -0.55
HDLBP-206ENST00000417540 IGKV6D-21A0A0A0MT36 114 aa11.6□□□□□ -0.55
HDLBP-206ENST00000417540 ZNF862O60290 1169 aa11.6□□□□□ -0.55
HDLBP-206ENST00000417540 FGBP02675 491 aa11.6□□□□□ -0.55
HDLBP-206ENST00000417540 CXCL10P02778 98 aa11.6□□□□□ -0.55
HDLBP-206ENST00000417540 GHRP10912 638 aa11.6□□□□□ -0.55
HDLBP-206ENST00000417540 RBM25P49756 843 aaKnown RBP11.6□□□□□ -0.55
HDLBP-206ENST00000417540 GRIN2CQ14957 1233 aa11.6□□□□□ -0.55
HDLBP-206ENST00000417540 LETM2Q2VYF4 491 aa11.6□□□□□ -0.55
HDLBP-206ENST00000417540 ABHD15Q6UXT9 468 aa11.6□□□□□ -0.55
HDLBP-206ENST00000417540 LIN28BQ6ZN17 250 aaKnown RBP eCLIP11.6□□□□□ -0.55
HDLBP-206ENST00000417540 PHF6Q8IWS0 365 aaKnown RBP eCLIP11.6□□□□□ -0.55
HDLBP-206ENST00000417540 CCDC155Q8N6L0 562 aa11.6□□□□□ -0.55
HDLBP-206ENST00000417540 USP38Q8NB14 1042 aa11.6□□□□□ -0.55
HDLBP-206ENST00000417540 TIFAQ96CG3 184 aa11.6□□□□□ -0.55
HDLBP-206ENST00000417540 SH2D3AQ9BRG2 576 aa11.6□□□□□ -0.55
HDLBP-206ENST00000417540 SEZ6LQ9BYH1 1024 aa11.6□□□□□ -0.55
HDLBP-206ENST00000417540 FTOQ9C0B1 505 aaKnown RBP eCLIP11.6□□□□□ -0.553e-8■■■■□ 24.2
HDLBP-206ENST00000417540 GLT8D2Q9H1C3 349 aa11.6□□□□□ -0.55
HDLBP-206ENST00000417540 SH3GLB2Q9NR46 395 aa11.6□□□□□ -0.55
HDLBP-206ENST00000417540 FNDC1Q4ZHG4 1894 aaPredicted RBP11.59□□□□□ -0.55
HDLBP-206ENST00000417540 MBLAC1A4D2B0 266 aaPredicted RBP11.59□□□□□ -0.55
HDLBP-206ENST00000417540 KIF28PB7ZC32 967 aa11.59□□□□□ -0.55
HDLBP-206ENST00000417540 BACH1O14867 736 aa11.59□□□□□ -0.55
HDLBP-206ENST00000417540 CDKL5O76039 1030 aa11.59□□□□□ -0.55
HDLBP-206ENST00000417540 ATG7O95352 703 aa11.59□□□□□ -0.55
HDLBP-206ENST00000417540 CA3P07451 260 aa11.59□□□□□ -0.55
HDLBP-206ENST00000417540 INSRRP14616 1297 aa11.59□□□□□ -0.55
HDLBP-206ENST00000417540 PRKCEQ02156 737 aa11.59□□□□□ -0.55
HDLBP-206ENST00000417540 NONOQ15233 471 aaKnown RBP eCLIP11.59□□□□□ -0.556e-7■■■■□ 21.8
HDLBP-206ENST00000417540 ANKRD1Q15327 319 aa11.59□□□□□ -0.55
HDLBP-206ENST00000417540 FAM117BQ6P1L5 589 aa11.59□□□□□ -0.55
HDLBP-206ENST00000417540 CPLX2Q6PUV4 134 aaKnown RBP11.59□□□□□ -0.55
HDLBP-206ENST00000417540 GIMAP8Q8ND71 665 aaPredicted RBP11.59□□□□□ -0.55
HDLBP-206ENST00000417540 BICD2Q8TD16 824 aa11.59□□□□□ -0.55
HDLBP-206ENST00000417540 DNAJB3Q8WWF6 145 aa11.59□□□□□ -0.55
HDLBP-206ENST00000417540 SLC5A5Q92911 643 aa11.59□□□□□ -0.55
HDLBP-206ENST00000417540 ZNF668Q96K58 619 aaPredicted RBP11.59□□□□□ -0.55
HDLBP-206ENST00000417540 MBOAT7Q96N66 472 aa11.59□□□□□ -0.55
HDLBP-206ENST00000417540 CERS4Q9HA82 394 aa11.59□□□□□ -0.55
HDLBP-206ENST00000417540 ERAP1Q9NZ08 941 aa11.59□□□□□ -0.55
HDLBP-206ENST00000417540 WRAP73Q9P2S5 460 aaPredicted RBP11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms