RNA–Protein interactions for RNA: ENST00000415107.5

ATG4B-207, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 5

Gene ATG4B, Length 356 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-207ENST00000415107 KIAA0753Q2KHM9 967 aa13.41□□□□□ -0.26
ATG4B-207ENST00000415107 TMEM266Q2M3C6 531 aa13.41□□□□□ -0.26
ATG4B-207ENST00000415107 KCTD17Q8N5Z5 321 aa13.41□□□□□ -0.26
ATG4B-207ENST00000415107 SPRYD3Q8NCJ5 442 aa13.41□□□□□ -0.26
ATG4B-207ENST00000415107 ATP6V0A1Q93050 837 aa13.41□□□□□ -0.26
ATG4B-207ENST00000415107 GJA10Q969M2 543 aa13.41□□□□□ -0.26
ATG4B-207ENST00000415107 FAM167AQ96KS9 214 aa13.41□□□□□ -0.26
ATG4B-207ENST00000415107 AK8Q96MA6 479 aa13.41□□□□□ -0.26
ATG4B-207ENST00000415107 ZNF396Q96N95 335 aaPredicted RBP13.41□□□□□ -0.26
ATG4B-207ENST00000415107 HSD17B14Q9BPX1 270 aa13.41□□□□□ -0.26
ATG4B-207ENST00000415107 ZNF302Q9NR11 478 aa13.41□□□□□ -0.26
ATG4B-207ENST00000415107 GTF2IRD1Q9UHL9 959 aa13.41□□□□□ -0.26
ATG4B-207ENST00000415107 PPME1Q9Y570 386 aa13.41□□□□□ -0.26
ATG4B-207ENST00000415107 COL1A2P08123 1366 aa13.41□□□□□ -0.26
ATG4B-207ENST00000415107 NRCAMQ92823 1304 aa13.4□□□□□ -0.26
ATG4B-207ENST00000415107 EML1O00423 815 aa13.4□□□□□ -0.26
ATG4B-207ENST00000415107 MARCH6O60337 910 aa13.4□□□□□ -0.26
ATG4B-207ENST00000415107 CD4P01730 458 aa13.4□□□□□ -0.26
ATG4B-207ENST00000415107 MYCNP04198 464 aaPredicted RBP13.4□□□□□ -0.26
ATG4B-207ENST00000415107 P4HBP07237 508 aaKnown RBP13.4□□□□□ -0.26
ATG4B-207ENST00000415107 TXKP42681 527 aa13.4□□□□□ -0.26
ATG4B-207ENST00000415107 ADAM17P78536 824 aa13.4□□□□□ -0.26
ATG4B-207ENST00000415107 SP4Q02446 784 aa13.4□□□□□ -0.26
ATG4B-207ENST00000415107 NBPF20Q3BBV1 942 aa13.4□□□□□ -0.26
ATG4B-207ENST00000415107 TRIM50Q86XT4 487 aa13.4□□□□□ -0.26
ATG4B-207ENST00000415107 FAM126BQ8IXS8 530 aa13.4□□□□□ -0.26
ATG4B-207ENST00000415107 C4orf19Q8IY42 314 aa13.4□□□□□ -0.26
ATG4B-207ENST00000415107 ATP8B4Q8TF62 1192 aa13.4□□□□□ -0.26
ATG4B-207ENST00000415107 BBXQ8WY36 941 aaPredicted RBP13.4□□□□□ -0.26
ATG4B-207ENST00000415107 FERMT2Q96AC1 680 aa13.4□□□□□ -0.26
ATG4B-207ENST00000415107 USP28Q96RU2 1077 aa13.4□□□□□ -0.26
ATG4B-207ENST00000415107 MYH9P35579 1960 aaKnown RBP13.4□□□□□ -0.27
ATG4B-207ENST00000415107 MBLAC1A4D2B0 266 aaPredicted RBP13.39□□□□□ -0.27
ATG4B-207ENST00000415107 CHMP2AO43633 222 aa13.39□□□□□ -0.27
ATG4B-207ENST00000415107 HBP1O60381 514 aa13.39□□□□□ -0.27
ATG4B-207ENST00000415107 SORBS3O60504 671 aa13.39□□□□□ -0.27
ATG4B-207ENST00000415107 PPP6R2O75170 966 aa13.39□□□□□ -0.27
ATG4B-207ENST00000415107 RPLP2P05387 115 aaKnown RBP13.39□□□□□ -0.27
ATG4B-207ENST00000415107 QARSP47897 775 aaKnown RBP13.39□□□□□ -0.27
ATG4B-207ENST00000415107 PSMC5P62195 406 aa13.39□□□□□ -0.27
ATG4B-207ENST00000415107 RBL2Q08999 1139 aa13.39□□□□□ -0.27
ATG4B-207ENST00000415107 SLC39A14Q15043 492 aa13.39□□□□□ -0.27
ATG4B-207ENST00000415107 PLCB4Q15147 1175 aa13.39□□□□□ -0.27
ATG4B-207ENST00000415107 LRRC26Q2I0M4 334 aa13.39□□□□□ -0.27
ATG4B-207ENST00000415107 HAUS3Q68CZ6 603 aa13.39□□□□□ -0.27
ATG4B-207ENST00000415107 PDXDC2PQ6P474 469 aa13.39□□□□□ -0.27
ATG4B-207ENST00000415107 DTHD1Q6ZMT9 781 aa13.39□□□□□ -0.27
ATG4B-207ENST00000415107 LINC00301Q8NCQ3 95 aa13.39□□□□□ -0.27
ATG4B-207ENST00000415107 ERMNQ8TAM6 284 aa13.39□□□□□ -0.27
ATG4B-207ENST00000415107 GLG1Q92896 1179 aa13.39□□□□□ -0.27
ATG4B-207ENST00000415107 POLR3CQ9BUI4 534 aaPredicted RBP13.39□□□□□ -0.27
ATG4B-207ENST00000415107 TUFT1Q9NNX1 390 aa13.39□□□□□ -0.27
ATG4B-207ENST00000415107 GABBR1Q9UBS5 961 aa13.39□□□□□ -0.27
ATG4B-207ENST00000415107 DAXXQ9UER7 740 aaPredicted RBP13.39□□□□□ -0.27
ATG4B-207ENST00000415107 CFAP45Q9UL16 551 aa13.39□□□□□ -0.27
ATG4B-207ENST00000415107 SAMM50Q9Y512 469 aa13.39□□□□□ -0.27
ATG4B-207ENST00000415107 POTEMA6NI47 508 aa13.38□□□□□ -0.27
ATG4B-207ENST00000415107 BACH1O14867 736 aa13.38□□□□□ -0.27
ATG4B-207ENST00000415107 ZNF862O60290 1169 aa13.38□□□□□ -0.27
ATG4B-207ENST00000415107 SLITRK3O94933 977 aa13.38□□□□□ -0.27
ATG4B-207ENST00000415107 STBD1O95210 358 aa13.38□□□□□ -0.27
ATG4B-207ENST00000415107 SMIM10L2AP0DMW4 78 aa13.38□□□□□ -0.27
ATG4B-207ENST00000415107 SMIM10L2BP0DMW5 78 aa13.38□□□□□ -0.27
ATG4B-207ENST00000415107 GNAT1P11488 350 aa13.38□□□□□ -0.27
ATG4B-207ENST00000415107 ATP4AP20648 1035 aa13.38□□□□□ -0.27
ATG4B-207ENST00000415107 RPA1P27694 616 aa13.38□□□□□ -0.27
ATG4B-207ENST00000415107 LONP1P36776 959 aaKnown RBP13.38□□□□□ -0.27
ATG4B-207ENST00000415107 RTP1P59025 263 aa13.38□□□□□ -0.27
ATG4B-207ENST00000415107 PSMC6P62333 389 aa13.38□□□□□ -0.27
ATG4B-207ENST00000415107 IL17AQ16552 155 aa13.38□□□□□ -0.27
ATG4B-207ENST00000415107 HYIQ5T013 277 aa13.38□□□□□ -0.27
ATG4B-207ENST00000415107 UTP14CQ5TAP6 766 aaKnown RBP13.38□□□□□ -0.27
ATG4B-207ENST00000415107 SWSAP1Q6NVH7 229 aa13.38□□□□□ -0.27
ATG4B-207ENST00000415107 FAM173BQ6P4H8 233 aa13.38□□□□□ -0.27
ATG4B-207ENST00000415107 EIF2AK1Q9BQI3 630 aaKnown RBP13.38□□□□□ -0.27
ATG4B-207ENST00000415107 NIFKQ9BYG3 293 aaKnown RBP13.38□□□□□ -0.27
ATG4B-207ENST00000415107 RNPEPQ9H4A4 650 aa13.38□□□□□ -0.27
ATG4B-207ENST00000415107 ZSWIM4Q9H7M6 989 aa13.38□□□□□ -0.27
ATG4B-207ENST00000415107 SRPRBQ9Y5M8 271 aaKnown RBP13.38□□□□□ -0.27
ATG4B-207ENST00000415107 CLIC4Q9Y696 253 aa13.38□□□□□ -0.27
ATG4B-207ENST00000415107 POTEB3A0JP26 581 aa13.37□□□□□ -0.27
ATG4B-207ENST00000415107 RRN3P2A6NIE6 340 aa13.37□□□□□ -0.27
ATG4B-207ENST00000415107 DCDC2CA8MYV0 355 aa13.37□□□□□ -0.27
ATG4B-207ENST00000415107 OATP04181 439 aa13.37□□□□□ -0.27
ATG4B-207ENST00000415107 XRCC6P12956 609 aaKnown RBP eCLIP13.37□□□□□ -0.27
ATG4B-207ENST00000415107 TECP42680 631 aa13.37□□□□□ -0.27
ATG4B-207ENST00000415107 PRKCEQ02156 737 aa13.37□□□□□ -0.27
ATG4B-207ENST00000415107 UGCGQ16739 394 aa13.37□□□□□ -0.27
ATG4B-207ENST00000415107 TRIM60Q495X7 471 aa13.37□□□□□ -0.27
ATG4B-207ENST00000415107 XKR3Q5GH77 459 aa13.37□□□□□ -0.27
ATG4B-207ENST00000415107 ZNF484Q5JVG2 852 aa13.37□□□□□ -0.27
ATG4B-207ENST00000415107 NCAPH2Q6IBW4 605 aa13.37□□□□□ -0.27
ATG4B-207ENST00000415107 POTEBQ6S5H4 581 aa13.37□□□□□ -0.27
ATG4B-207ENST00000415107 RPAINQ86UA6 219 aa13.37□□□□□ -0.27
ATG4B-207ENST00000415107 C7orf31Q8N865 590 aa13.37□□□□□ -0.27
ATG4B-207ENST00000415107 KCNG4Q8TDN1 519 aa13.37□□□□□ -0.27
ATG4B-207ENST00000415107 IPO9Q96P70 1041 aaKnown RBP13.37□□□□□ -0.27
ATG4B-207ENST00000415107 UIMC1Q96RL1 719 aa13.37□□□□□ -0.27
ATG4B-207ENST00000415107 CTAGE1Q96RT6 745 aa13.37□□□□□ -0.27
ATG4B-207ENST00000415107 LXNQ9BS40 222 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms