RNA–Protein interactions for RNA: ENST00000414416.2

LINC00116-201, Transcript of Uncharacterized protein encoded by LINC00116, humanhuman

APPRIS P5 TSL 1 (best) BASIC

Gene LINC00116, Length 2,051 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00116-201ENST00000414416 SNW1Q13573 536 aaKnown RBP17.24■□□□□ 0.35
LINC00116-201ENST00000414416 FSIP1Q8NA03 581 aa17.24■□□□□ 0.35
LINC00116-201ENST00000414416 CCSER1Q9C0I3 900 aa17.24■□□□□ 0.35
LINC00116-201ENST00000414416 PDCL3Q9H2J4 239 aa17.24■□□□□ 0.35
LINC00116-201ENST00000414416 SPC25Q9HBM1 224 aa17.24■□□□□ 0.35
LINC00116-201ENST00000414416 A0A1B0GVL5 298 aa17.23■□□□□ 0.35
LINC00116-201ENST00000414416 XRCC6P12956 609 aaKnown RBP eCLIP17.23■□□□□ 0.35
LINC00116-201ENST00000414416 CYP4A11Q02928 519 aa17.23■□□□□ 0.35
LINC00116-201ENST00000414416 ZRSR1Q15695 479 aaKnown RBP17.23■□□□□ 0.35
LINC00116-201ENST00000414416 RASSF8Q8NHQ8 419 aa17.23■□□□□ 0.35
LINC00116-201ENST00000414416 NEK9Q8TD19 979 aa17.23■□□□□ 0.35
LINC00116-201ENST00000414416 HSD17B14Q9BPX1 270 aa17.23■□□□□ 0.35
LINC00116-201ENST00000414416 XRN2Q9H0D6 950 aaKnown RBP eCLIP17.23■□□□□ 0.35
LINC00116-201ENST00000414416 UNC93B1Q9H1C4 597 aa17.23■□□□□ 0.35
LINC00116-201ENST00000414416 XPNPEP3Q9NQH7 507 aa17.23■□□□□ 0.35
LINC00116-201ENST00000414416 RGL1Q9NZL6 768 aa17.23■□□□□ 0.35
LINC00116-201ENST00000414416 SYNRGQ9UMZ2 1314 aa17.22■□□□□ 0.35
LINC00116-201ENST00000414416 BACH1O14867 736 aa17.22■□□□□ 0.35
LINC00116-201ENST00000414416 MYCP01106 439 aaPredicted RBP17.22■□□□□ 0.35
LINC00116-201ENST00000414416 P4HBP07237 508 aaKnown RBP17.22■□□□□ 0.35
LINC00116-201ENST00000414416 MMP3P08254 477 aa17.22■□□□□ 0.35
LINC00116-201ENST00000414416 RPA1P27694 616 aa17.22■□□□□ 0.35
LINC00116-201ENST00000414416 CPT1AP50416 773 aa17.22■□□□□ 0.35
LINC00116-201ENST00000414416 GJA9P57773 515 aa17.22■□□□□ 0.35
LINC00116-201ENST00000414416 BRDTQ58F21 947 aaPredicted RBP17.22■□□□□ 0.35
LINC00116-201ENST00000414416 SWSAP1Q6NVH7 229 aa17.22■□□□□ 0.35
LINC00116-201ENST00000414416 CATSPER3Q86XQ3 398 aa17.22■□□□□ 0.35
LINC00116-201ENST00000414416 BANK1Q8NDB2 785 aa17.22■□□□□ 0.35
LINC00116-201ENST00000414416 ENGASEQ8NFI3 743 aa17.22■□□□□ 0.35
LINC00116-201ENST00000414416 CALML4Q96GE6 196 aa17.22■□□□□ 0.35
LINC00116-201ENST00000414416 DYDC2Q96IM9 177 aa17.22■□□□□ 0.35
LINC00116-201ENST00000414416 CDK5RAP3Q96JB5 506 aa17.22■□□□□ 0.35
LINC00116-201ENST00000414416 POLR3CQ9BUI4 534 aaPredicted RBP17.22■□□□□ 0.35
LINC00116-201ENST00000414416 GRPEL1Q9HAV7 217 aa17.22■□□□□ 0.35
LINC00116-201ENST00000414416 KDM3AQ9Y4C1 1321 aa17.22■□□□□ 0.35
LINC00116-201ENST00000414416 A6NJR5 290 aa17.22■□□□□ 0.35
LINC00116-201ENST00000414416 PPFIA4O75335 1185 aa17.22■□□□□ 0.35
LINC00116-201ENST00000414416 MED24O75448 989 aa17.22■□□□□ 0.35
LINC00116-201ENST00000414416 SLITRK3O94933 977 aa17.22■□□□□ 0.35
LINC00116-201ENST00000414416 PGK1P00558 417 aa17.22■□□□□ 0.35
LINC00116-201ENST00000414416 C6orf222P0C671 652 aaPredicted RBP17.22■□□□□ 0.35
LINC00116-201ENST00000414416 SPATA31C1P0DKV0 1188 aa17.22■□□□□ 0.35
LINC00116-201ENST00000414416 PFKFB1P16118 471 aa17.22■□□□□ 0.35
LINC00116-201ENST00000414416 CTTNQ14247 550 aaKnown RBP17.22■□□□□ 0.35
LINC00116-201ENST00000414416 KARSQ15046 597 aaKnown RBP17.22■□□□□ 0.35
LINC00116-201ENST00000414416 MTFR1Q15390 333 aa17.22■□□□□ 0.35
LINC00116-201ENST00000414416 FSCN1Q16658 493 aaKnown RBP17.22■□□□□ 0.35
LINC00116-201ENST00000414416 DGKDQ16760 1214 aa17.22■□□□□ 0.35
LINC00116-201ENST00000414416 CCDC60Q8IWA6 550 aaPredicted RBP17.22■□□□□ 0.35
LINC00116-201ENST00000414416 LXNQ9BS40 222 aa17.22■□□□□ 0.35
LINC00116-201ENST00000414416 UPF3AQ9H1J1 476 aaKnown RBP17.22■□□□□ 0.35
LINC00116-201ENST00000414416 RBSNQ9H1K0 784 aa17.22■□□□□ 0.35
LINC00116-201ENST00000414416 AZI2Q9H6S1 392 aa17.22■□□□□ 0.35
LINC00116-201ENST00000414416 TUFT1Q9NNX1 390 aa17.22■□□□□ 0.35
LINC00116-201ENST00000414416 GABBR1Q9UBS5 961 aa17.22■□□□□ 0.35
LINC00116-201ENST00000414416 CCDC39Q9UFE4 941 aa17.22■□□□□ 0.35
LINC00116-201ENST00000414416 IGKV6D-21A0A0A0MT36 114 aa17.21■□□□□ 0.35
LINC00116-201ENST00000414416 SLC26A4O43511 780 aa17.21■□□□□ 0.35
LINC00116-201ENST00000414416 CCL5P13501 91 aa17.21■□□□□ 0.35
LINC00116-201ENST00000414416 QARSP47897 775 aaKnown RBP17.21■□□□□ 0.35
LINC00116-201ENST00000414416 NDUFA8P51970 172 aa17.21■□□□□ 0.35
LINC00116-201ENST00000414416 LHX8Q68G74 356 aa17.21■□□□□ 0.35
LINC00116-201ENST00000414416 TPH2Q8IWU9 490 aa17.21■□□□□ 0.35
LINC00116-201ENST00000414416 ATP6V0A1Q93050 837 aa17.21■□□□□ 0.35
LINC00116-201ENST00000414416 ZNF333Q96JL9 665 aa17.21■□□□□ 0.35
LINC00116-201ENST00000414416 NT5C3AQ9H0P0 336 aa17.21■□□□□ 0.35
LINC00116-201ENST00000414416 RNF208Q9H0X6 261 aa17.21■□□□□ 0.35
LINC00116-201ENST00000414416 NUP62CLQ9H1M0 184 aa17.21■□□□□ 0.35
LINC00116-201ENST00000414416 ZNF302Q9NR11 478 aa17.21■□□□□ 0.35
LINC00116-201ENST00000414416 KCNH3Q9ULD8 1083 aa17.21■□□□□ 0.35
LINC00116-201ENST00000414416 HPSEQ9Y251 543 aa17.21■□□□□ 0.35
LINC00116-201ENST00000414416 POTEB3A0JP26 581 aa17.2■□□□□ 0.34
LINC00116-201ENST00000414416 PSMC5P62195 406 aa17.2■□□□□ 0.34
LINC00116-201ENST00000414416 IRX5P78411 483 aaPredicted RBP17.2■□□□□ 0.34
LINC00116-201ENST00000414416 HYIQ5T013 277 aa17.2■□□□□ 0.34
LINC00116-201ENST00000414416 UTP14CQ5TAP6 766 aaKnown RBP17.2■□□□□ 0.34
LINC00116-201ENST00000414416 FAM160B1Q5W0V3 765 aa17.2■□□□□ 0.34
LINC00116-201ENST00000414416 POTEBQ6S5H4 581 aa17.2■□□□□ 0.34
LINC00116-201ENST00000414416 CCDC73Q6ZRK6 1079 aa17.2■□□□□ 0.34
LINC00116-201ENST00000414416 PDILTQ8N807 584 aa17.2■□□□□ 0.34
LINC00116-201ENST00000414416 ARMC5Q96C12 935 aa17.2■□□□□ 0.34
LINC00116-201ENST00000414416 PANK2Q9BZ23 570 aa17.2■□□□□ 0.34
LINC00116-201ENST00000414416 CLSTN2Q9H4D0 955 aa17.2■□□□□ 0.34
LINC00116-201ENST00000414416 ZSWIM4Q9H7M6 989 aa17.2■□□□□ 0.34
LINC00116-201ENST00000414416 PAK6Q9NQU5 681 aaPredicted RBP17.2■□□□□ 0.34
LINC00116-201ENST00000414416 DDX19AQ9NUU7 478 aaKnown RBP17.2■□□□□ 0.34
LINC00116-201ENST00000414416 FAM237AA0A1B0GTK4 181 aa17.2■□□□□ 0.34
LINC00116-201ENST00000414416 ADAMTS4O75173 837 aa17.2■□□□□ 0.34
LINC00116-201ENST00000414416 HOXD8P13378 290 aaPredicted RBP17.2■□□□□ 0.34
LINC00116-201ENST00000414416 MUTP22033 750 aa17.2■□□□□ 0.34
LINC00116-201ENST00000414416 STAT5BP51692 787 aa17.2■□□□□ 0.34
LINC00116-201ENST00000414416 BEX3Q00994 111 aa17.2■□□□□ 0.34
LINC00116-201ENST00000414416 ECM1Q16610 540 aa17.2■□□□□ 0.34
LINC00116-201ENST00000414416 UGCGQ16739 394 aa17.2■□□□□ 0.34
LINC00116-201ENST00000414416 GNASQ5JWF2 1037 aa17.2■□□□□ 0.34
LINC00116-201ENST00000414416 CKAP2LQ8IYA6 745 aa17.2■□□□□ 0.34
LINC00116-201ENST00000414416 GLG1Q92896 1179 aa17.2■□□□□ 0.34
LINC00116-201ENST00000414416 PCYT2Q99447 389 aa17.2■□□□□ 0.34
LINC00116-201ENST00000414416 PLIN2Q99541 437 aa17.2■□□□□ 0.34
LINC00116-201ENST00000414416 KIAA1024Q9UPX6 916 aa17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 9.2 ms