RNA–Protein interactions for RNA: ENST00000414220.2

CHD1-202, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 5

Gene CHD1, Length 434 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-202ENST00000414220 ACTN1P12814 892 aa16.61■□□□□ 0.25
CHD1-202ENST00000414220 CSF2RAP15509 400 aa16.61■□□□□ 0.25
CHD1-202ENST00000414220 GUCY1B3Q02153 619 aa16.61■□□□□ 0.25
CHD1-202ENST00000414220 SWSAP1Q6NVH7 229 aa16.61■□□□□ 0.25
CHD1-202ENST00000414220 TAF2Q6P1X5 1199 aa16.61■□□□□ 0.25
CHD1-202ENST00000414220 PDXDC2PQ6P474 469 aa16.61■□□□□ 0.25
CHD1-202ENST00000414220 SLFN12Q8IYM2 578 aa16.61■□□□□ 0.25
CHD1-202ENST00000414220 RDM1Q8NG50 284 aa16.61■□□□□ 0.25
CHD1-202ENST00000414220 LENG9Q96B70 501 aa16.61■□□□□ 0.25
CHD1-202ENST00000414220 MBOAT7Q96N66 472 aa16.61■□□□□ 0.25
CHD1-202ENST00000414220 UIMC1Q96RL1 719 aa16.61■□□□□ 0.25
CHD1-202ENST00000414220 DISC1Q9NRI5 854 aa16.61■□□□□ 0.25
CHD1-202ENST00000414220 SETD4Q9NVD3 440 aa16.61■□□□□ 0.25
CHD1-202ENST00000414220 IGKV6D-21A0A0A0MT36 114 aa16.6■□□□□ 0.25
CHD1-202ENST00000414220 POTEB3A0JP26 581 aa16.6■□□□□ 0.25
CHD1-202ENST00000414220 H3BQV1 296 aa16.6■□□□□ 0.25
CHD1-202ENST00000414220 HBP1O60381 514 aa16.6■□□□□ 0.25
CHD1-202ENST00000414220 DKC1O60832 514 aaKnown RBP eCLIP16.6■□□□□ 0.25
CHD1-202ENST00000414220 CAND2O75155 1236 aa16.6■□□□□ 0.25
CHD1-202ENST00000414220 CCNE2O96020 404 aa16.6■□□□□ 0.25
CHD1-202ENST00000414220 IQCF3P0C7M6 154 aa16.6■□□□□ 0.25
CHD1-202ENST00000414220 SELPP16109 830 aa16.6■□□□□ 0.25
CHD1-202ENST00000414220 GRIK4Q16099 956 aa16.6■□□□□ 0.25
CHD1-202ENST00000414220 POTEBQ6S5H4 581 aa16.6■□□□□ 0.25
CHD1-202ENST00000414220 SERINC5Q86VE9 423 aa16.6■□□□□ 0.25
CHD1-202ENST00000414220 RNPC3Q96LT9 517 aaKnown RBP16.6■□□□□ 0.25
CHD1-202ENST00000414220 FTOQ9C0B1 505 aaKnown RBP eCLIP16.6■□□□□ 0.25
CHD1-202ENST00000414220 NRBP2Q9NSY0 501 aa16.6■□□□□ 0.25
CHD1-202ENST00000414220 NOL7Q9UMY1 257 aaKnown RBP16.6■□□□□ 0.25
CHD1-202ENST00000414220 CEP131Q9UPN4 1083 aa16.6■□□□□ 0.25
CHD1-202ENST00000414220 CEP290O15078 2479 aa16.6■□□□□ 0.25
CHD1-202ENST00000414220 TREHO43280 583 aa16.59■□□□□ 0.25
CHD1-202ENST00000414220 CHMP2AO43633 222 aa16.59■□□□□ 0.25
CHD1-202ENST00000414220 THPOP40225 353 aa16.59■□□□□ 0.25
CHD1-202ENST00000414220 RBL2Q08999 1139 aa16.59■□□□□ 0.25
CHD1-202ENST00000414220 SHHQ15465 462 aa16.59■□□□□ 0.25
CHD1-202ENST00000414220 LRIT3Q3SXY7 679 aa16.59■□□□□ 0.25
CHD1-202ENST00000414220 LRRC8DQ7L1W4 858 aa16.59■□□□□ 0.25
CHD1-202ENST00000414220 MIER3Q7Z3K6 550 aa16.59■□□□□ 0.25
CHD1-202ENST00000414220 SCLYQ96I15 445 aa16.59■□□□□ 0.25
CHD1-202ENST00000414220 FAM167AQ96KS9 214 aa16.59■□□□□ 0.25
CHD1-202ENST00000414220 WNT8AQ9H1J5 351 aa16.59■□□□□ 0.25
CHD1-202ENST00000414220 TUBE1Q9UJT0 475 aa16.59■□□□□ 0.25
CHD1-202ENST00000414220 TELO2Q9Y4R8 837 aa16.59■□□□□ 0.25
CHD1-202ENST00000414220 UMODL1Q5DID0 1318 aa16.59■□□□□ 0.25
CHD1-202ENST00000414220 DNAH12Q6ZR08 3092 aa16.58■□□□□ 0.24
CHD1-202ENST00000414220 EDIL3O43854 480 aa16.58■□□□□ 0.24
CHD1-202ENST00000414220 PSMD10O75832 226 aa16.58■□□□□ 0.24
CHD1-202ENST00000414220 CKBP12277 381 aa16.58■□□□□ 0.24
CHD1-202ENST00000414220 INSRRP14616 1297 aa16.58■□□□□ 0.24
CHD1-202ENST00000414220 GJB2P29033 226 aa16.58■□□□□ 0.24
CHD1-202ENST00000414220 HOXC8P31273 242 aa16.58■□□□□ 0.24
CHD1-202ENST00000414220 IGBP1P78318 339 aa16.58■□□□□ 0.24
CHD1-202ENST00000414220 ZNF200P98182 395 aaPredicted RBP16.58■□□□□ 0.24
CHD1-202ENST00000414220 ORC2Q13416 577 aaPredicted RBP16.58■□□□□ 0.24
CHD1-202ENST00000414220 PLCB4Q15147 1175 aa16.58■□□□□ 0.24
CHD1-202ENST00000414220 ZNF484Q5JVG2 852 aa16.58■□□□□ 0.24
CHD1-202ENST00000414220 ETNPPLQ8TBG4 499 aa16.58■□□□□ 0.24
CHD1-202ENST00000414220 ATP8B4Q8TF62 1192 aa16.58■□□□□ 0.24
CHD1-202ENST00000414220 LMBR1Q8WVP7 490 aa16.58■□□□□ 0.24
CHD1-202ENST00000414220 BBXQ8WY36 941 aaPredicted RBP16.58■□□□□ 0.24
CHD1-202ENST00000414220 TNFRSF25Q93038 417 aa16.58■□□□□ 0.24
CHD1-202ENST00000414220 PCYT2Q99447 389 aa16.58■□□□□ 0.24
CHD1-202ENST00000414220 GABBR1Q9UBS5 961 aa16.58■□□□□ 0.24
CHD1-202ENST00000414220 MAFBQ9Y5Q3 323 aaPredicted RBP16.58■□□□□ 0.24
CHD1-202ENST00000414220 RSPH10B2B2RC85 870 aa16.57■□□□□ 0.24
CHD1-202ENST00000414220 NEMFO60524 1076 aa16.57■□□□□ 0.24
CHD1-202ENST00000414220 RSPH10BP0C881 870 aa16.57■□□□□ 0.24
CHD1-202ENST00000414220 ACRP10323 421 aa16.57■□□□□ 0.24
CHD1-202ENST00000414220 TRAPPC10P48553 1259 aa16.57■□□□□ 0.24
CHD1-202ENST00000414220 CALCRLQ16602 461 aa16.57■□□□□ 0.24
CHD1-202ENST00000414220 ZNF365Q70YC5 407 aa16.57■□□□□ 0.24
CHD1-202ENST00000414220 DEFB128Q7Z7B8 93 aa16.57■□□□□ 0.24
CHD1-202ENST00000414220 NOSTRINQ8IVI9 506 aa16.57■□□□□ 0.24
CHD1-202ENST00000414220 CCDC60Q8IWA6 550 aaPredicted RBP16.57■□□□□ 0.24
CHD1-202ENST00000414220 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.57■□□□□ 0.243e-7■■■■■ 35.2
CHD1-202ENST00000414220 UNC45AQ9H3U1 944 aa16.57■□□□□ 0.24
CHD1-202ENST00000414220 COL1A2P08123 1366 aa16.56■□□□□ 0.24
CHD1-202ENST00000414220 M0QZ92 97 aa16.56■□□□□ 0.24
CHD1-202ENST00000414220 SLC37A4O43826 429 aa16.56■□□□□ 0.24
CHD1-202ENST00000414220 CD2BP2O95400 341 aaKnown RBP16.56■□□□□ 0.24
CHD1-202ENST00000414220 ATP2B1P20020 1258 aa16.56■□□□□ 0.24
CHD1-202ENST00000414220 PDCP20941 246 aa16.56■□□□□ 0.24
CHD1-202ENST00000414220 EARS2Q5JPH6 523 aaKnown RBP16.56■□□□□ 0.24
CHD1-202ENST00000414220 TMEM240Q5SV17 173 aa16.56■□□□□ 0.24
CHD1-202ENST00000414220 C9orf50Q5SZB4 431 aa16.56■□□□□ 0.24
CHD1-202ENST00000414220 MCTP1Q6DN14 999 aa16.56■□□□□ 0.24
CHD1-202ENST00000414220 DHX38Q92620 1227 aaKnown RBP16.56■□□□□ 0.24
CHD1-202ENST00000414220 KCNMB3Q9NPA1 279 aa16.56■□□□□ 0.24
CHD1-202ENST00000414220 PCDH10Q9P2E7 1040 aa16.56■□□□□ 0.24
CHD1-202ENST00000414220 PCDHA12Q9UN75 941 aa16.56■□□□□ 0.24
CHD1-202ENST00000414220 HSFX4A0A1B0GTS1 333 aaPredicted RBP16.55■□□□□ 0.24
CHD1-202ENST00000414220 HSFX3A0A1B0GWH4 333 aaPredicted RBP16.55■□□□□ 0.24
CHD1-202ENST00000414220 MBLAC1A4D2B0 266 aaPredicted RBP16.55■□□□□ 0.24
CHD1-202ENST00000414220 EPHB4P54760 987 aa16.55■□□□□ 0.24
CHD1-202ENST00000414220 ADAM17P78536 824 aa16.55■□□□□ 0.24
CHD1-202ENST00000414220 PPP2R5CQ13362 524 aa16.55■□□□□ 0.24
CHD1-202ENST00000414220 ZNF618Q5T7W0 954 aa16.55■□□□□ 0.24
CHD1-202ENST00000414220 IER5Q5VY09 327 aa16.55■□□□□ 0.24
CHD1-202ENST00000414220 LARP1BQ659C4 914 aaKnown RBP16.55■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms