RNA–Protein interactions for RNA: ENST00000413899.1

HMGB1P11-201, Transcript of high mobility group box 1 pseudogene 11, humanhuman

BASIC

Gene HMGB1P11, Length 637 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P11-201ENST00000413899 WASF3Q9UPY6 502 aa5.42□□□□□ -1.54
HMGB1P11-201ENST00000413899 KCTD3Q9Y597 815 aa5.42□□□□□ -1.54
HMGB1P11-201ENST00000413899 SPO11Q9Y5K1 396 aa5.42□□□□□ -1.54
HMGB1P11-201ENST00000413899 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP5.41□□□□□ -1.54
HMGB1P11-201ENST00000413899 ZNF839A8K0R7 811 aa5.41□□□□□ -1.54
HMGB1P11-201ENST00000413899 RFXAPO00287 272 aa5.41□□□□□ -1.54
HMGB1P11-201ENST00000413899 PLA2G1BP04054 148 aaKnown RBP5.41□□□□□ -1.54
HMGB1P11-201ENST00000413899 CYP17A1P05093 508 aa5.41□□□□□ -1.54
HMGB1P11-201ENST00000413899 C8AP07357 584 aa5.41□□□□□ -1.54
HMGB1P11-201ENST00000413899 PI3P19957 117 aa5.41□□□□□ -1.54
HMGB1P11-201ENST00000413899 POU3F3P20264 500 aaPredicted RBP5.41□□□□□ -1.54
HMGB1P11-201ENST00000413899 AOAHP28039 575 aa5.41□□□□□ -1.54
HMGB1P11-201ENST00000413899 LIMS1P48059 325 aa5.41□□□□□ -1.54
HMGB1P11-201ENST00000413899 KIF11P52732 1056 aa5.41□□□□□ -1.54
HMGB1P11-201ENST00000413899 LINC00310P59036 64 aa5.41□□□□□ -1.54
HMGB1P11-201ENST00000413899 OCRLQ01968 901 aa5.41□□□□□ -1.54
HMGB1P11-201ENST00000413899 KCNA10Q16322 511 aa5.41□□□□□ -1.54
HMGB1P11-201ENST00000413899 PKN1Q16512 942 aa5.41□□□□□ -1.54
HMGB1P11-201ENST00000413899 SKOR2Q2VWA4 1001 aaPredicted RBP5.41□□□□□ -1.54
HMGB1P11-201ENST00000413899 ZNF385BQ569K4 471 aa5.41□□□□□ -1.54
HMGB1P11-201ENST00000413899 CATSPEREQ5SY80 951 aa5.41□□□□□ -1.54
HMGB1P11-201ENST00000413899 CNKSR3Q6P9H4 555 aa5.41□□□□□ -1.54
HMGB1P11-201ENST00000413899 LIPIQ6XZB0 460 aa5.41□□□□□ -1.54
HMGB1P11-201ENST00000413899 CILP2Q8IUL8 1156 aa5.41□□□□□ -1.54
HMGB1P11-201ENST00000413899 EFHBQ8N7U6 833 aa5.41□□□□□ -1.54
HMGB1P11-201ENST00000413899 TTLL6Q8N841 843 aa5.41□□□□□ -1.54
HMGB1P11-201ENST00000413899 KIAA1958Q8N8K9 716 aa5.41□□□□□ -1.54
HMGB1P11-201ENST00000413899 SCYL1Q96KG9 808 aa5.41□□□□□ -1.54
HMGB1P11-201ENST00000413899 NOX5Q96PH1 765 aa5.41□□□□□ -1.54
HMGB1P11-201ENST00000413899 C11orf84Q9BUA3 381 aaPredicted RBP5.41□□□□□ -1.54
HMGB1P11-201ENST00000413899 BRINP2Q9C0B6 783 aa5.41□□□□□ -1.54
HMGB1P11-201ENST00000413899 DLL4Q9NR61 685 aa5.41□□□□□ -1.54
HMGB1P11-201ENST00000413899 BTBD7Q9P203 1132 aa5.41□□□□□ -1.54
HMGB1P11-201ENST00000413899 CNOT6Q9ULM6 557 aaKnown RBP5.41□□□□□ -1.54
HMGB1P11-201ENST00000413899 PMF1-BGLAPU3KQ54 211 aa5.41□□□□□ -1.54
HMGB1P11-201ENST00000413899 ANKRD62A6NC57 917 aa5.4□□□□□ -1.54
HMGB1P11-201ENST00000413899 PRAMEF25A6NGN4 478 aa5.4□□□□□ -1.54
HMGB1P11-201ENST00000413899 RASSF10A6NK89 507 aa5.4□□□□□ -1.54
HMGB1P11-201ENST00000413899 FOXP2O15409 715 aa5.4□□□□□ -1.54
HMGB1P11-201ENST00000413899 ZEB2O60315 1214 aa5.4□□□□□ -1.54
HMGB1P11-201ENST00000413899 EYA4O95677 639 aa5.4□□□□□ -1.54
HMGB1P11-201ENST00000413899 ENO2P09104 434 aaPredicted RBP5.4□□□□□ -1.54
HMGB1P11-201ENST00000413899 ADAM9Q13443 819 aa5.4□□□□□ -1.54
HMGB1P11-201ENST00000413899 ZNF174Q15697 407 aa5.4□□□□□ -1.54
HMGB1P11-201ENST00000413899 CT47A1Q5JQC4 288 aaPredicted RBP5.4□□□□□ -1.54
HMGB1P11-201ENST00000413899 VASNQ6EMK4 673 aa5.4□□□□□ -1.54
HMGB1P11-201ENST00000413899 STRA8Q7Z7C7 330 aa5.4□□□□□ -1.54
HMGB1P11-201ENST00000413899 UBR7Q8N806 425 aa5.4□□□□□ -1.54
HMGB1P11-201ENST00000413899 IGDCC4Q8TDY8 1250 aa5.4□□□□□ -1.54
HMGB1P11-201ENST00000413899 FNIP1Q8TF40 1166 aa5.4□□□□□ -1.54
HMGB1P11-201ENST00000413899 CHTF18Q8WVB6 975 aa5.4□□□□□ -1.54
HMGB1P11-201ENST00000413899 ASB15Q8WXK1 588 aa5.4□□□□□ -1.54
HMGB1P11-201ENST00000413899 DACT3Q96B18 629 aaPredicted RBP5.4□□□□□ -1.54
HMGB1P11-201ENST00000413899 WRNIP1Q96S55 665 aa5.4□□□□□ -1.54
HMGB1P11-201ENST00000413899 IFT22Q9H7X7 185 aa5.4□□□□□ -1.54
HMGB1P11-201ENST00000413899 THG1LQ9NWX6 298 aaKnown RBP5.4□□□□□ -1.54
HMGB1P11-201ENST00000413899 ASB1Q9Y576 335 aa5.4□□□□□ -1.54
HMGB1P11-201ENST00000413899 BRINP1O60477 761 aa5.39□□□□□ -1.55
HMGB1P11-201ENST00000413899 KRT37O76014 449 aa5.39□□□□□ -1.55
HMGB1P11-201ENST00000413899 FKBP9O95302 570 aa5.39□□□□□ -1.55
HMGB1P11-201ENST00000413899 MPIG6BO95866 241 aa5.39□□□□□ -1.55
HMGB1P11-201ENST00000413899 MMEP08473 750 aa5.39□□□□□ -1.55
HMGB1P11-201ENST00000413899 THBS2P35442 1172 aa5.39□□□□□ -1.55
HMGB1P11-201ENST00000413899 ADCYAP1R1P41586 468 aa5.39□□□□□ -1.55
HMGB1P11-201ENST00000413899 PFKPQ01813 784 aa5.39□□□□□ -1.55
HMGB1P11-201ENST00000413899 DLX2Q07687 328 aaPredicted RBP5.39□□□□□ -1.55
HMGB1P11-201ENST00000413899 SART3Q15020 963 aaKnown RBP5.39□□□□□ -1.55
HMGB1P11-201ENST00000413899 EPHA7Q15375 998 aa5.39□□□□□ -1.55
HMGB1P11-201ENST00000413899 VWA3BQ502W6 1294 aa5.39□□□□□ -1.55
HMGB1P11-201ENST00000413899 GPR158Q5T848 1215 aa5.39□□□□□ -1.55
HMGB1P11-201ENST00000413899 FKBP9P1Q75LS8 142 aa5.39□□□□□ -1.55
HMGB1P11-201ENST00000413899 SAPCD2Q86UD0 394 aa5.39□□□□□ -1.55
HMGB1P11-201ENST00000413899 USP7Q93009 1102 aa5.39□□□□□ -1.55
HMGB1P11-201ENST00000413899 C16orf92Q96LL3 132 aa5.39□□□□□ -1.55
HMGB1P11-201ENST00000413899 CLIC6Q96NY7 704 aa5.39□□□□□ -1.55
HMGB1P11-201ENST00000413899 ELF4Q99607 663 aaPredicted RBP5.39□□□□□ -1.55
HMGB1P11-201ENST00000413899 TTC1Q99614 292 aa5.39□□□□□ -1.55
HMGB1P11-201ENST00000413899 SYT3Q9BQG1 590 aa5.39□□□□□ -1.55
HMGB1P11-201ENST00000413899 PCIF1Q9H4Z3 704 aa5.39□□□□□ -1.55
HMGB1P11-201ENST00000413899 RBPJLQ9UBG7 517 aa5.39□□□□□ -1.55
HMGB1P11-201ENST00000413899 SH3D21A4FU49 640 aa5.38□□□□□ -1.55
HMGB1P11-201ENST00000413899 NPIPB6E9PJ23 425 aa5.38□□□□□ -1.55
HMGB1P11-201ENST00000413899 NEMP1O14524 444 aa5.38□□□□□ -1.55
HMGB1P11-201ENST00000413899 TGM5O43548 720 aa5.38□□□□□ -1.55
HMGB1P11-201ENST00000413899 CHGBP05060 677 aa5.38□□□□□ -1.55
HMGB1P11-201ENST00000413899 CPEP16870 476 aa5.38□□□□□ -1.55
HMGB1P11-201ENST00000413899 PTGS1P23219 599 aa5.38□□□□□ -1.55
HMGB1P11-201ENST00000413899 CNGA1P29973 690 aa5.38□□□□□ -1.55
HMGB1P11-201ENST00000413899 KPNA1P52294 538 aaPredicted RBP5.38□□□□□ -1.55
HMGB1P11-201ENST00000413899 IL2P60568 153 aa5.38□□□□□ -1.55
HMGB1P11-201ENST00000413899 PHC1P78364 1004 aa5.38□□□□□ -1.55
HMGB1P11-201ENST00000413899 SMAD3P84022 425 aaKnown RBP5.38□□□□□ -1.55
HMGB1P11-201ENST00000413899 NFKB2Q00653 900 aa5.38□□□□□ -1.55
HMGB1P11-201ENST00000413899 AMPD3Q01432 767 aa5.38□□□□□ -1.55
HMGB1P11-201ENST00000413899 LRRC32Q14392 662 aa5.38□□□□□ -1.55
HMGB1P11-201ENST00000413899 TMEM132BQ14DG7 1078 aa5.38□□□□□ -1.55
HMGB1P11-201ENST00000413899 SMAD2Q15796 467 aaKnown RBP5.38□□□□□ -1.55
HMGB1P11-201ENST00000413899 PRR31Q5SQ13 230 aa5.38□□□□□ -1.55
HMGB1P11-201ENST00000413899 TMC5Q6UXY8 1006 aa5.38□□□□□ -1.55
HMGB1P11-201ENST00000413899 NME9Q86XW9 330 aa5.38□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms