RNA–Protein interactions for RNA: ENST00000413578.5

LIMS2-210, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 3

Gene LIMS2, Length 930 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-210ENST00000413578 ZNF654Q8IZM8 581 aa13.99□□□□□ -0.17
LIMS2-210ENST00000413578 DNAJB3Q8WWF6 145 aa13.99□□□□□ -0.17
LIMS2-210ENST00000413578 CUL5Q93034 780 aa13.99□□□□□ -0.17
LIMS2-210ENST00000413578 P2RX5Q93086 422 aa13.99□□□□□ -0.17
LIMS2-210ENST00000413578 RRP36Q96EU6 259 aaKnown RBP13.99□□□□□ -0.17
LIMS2-210ENST00000413578 CDHR1Q96JP9 859 aa13.99□□□□□ -0.17
LIMS2-210ENST00000413578 MSLNLQ96KJ4 702 aa13.99□□□□□ -0.17
LIMS2-210ENST00000413578 MTA3Q9BTC8 594 aa13.99□□□□□ -0.17
LIMS2-210ENST00000413578 MYL10Q9BUA6 226 aa13.99□□□□□ -0.17
LIMS2-210ENST00000413578 PLAGL2Q9UPG8 496 aa13.99□□□□□ -0.17
LIMS2-210ENST00000413578 CDY2AQ9Y6F7 541 aa13.99□□□□□ -0.17
LIMS2-210ENST00000413578 SQORQ9Y6N5 450 aa13.99□□□□□ -0.17
LIMS2-210ENST00000413578 ZNF318Q5VUA4 2279 aa13.99□□□□□ -0.17
LIMS2-210ENST00000413578 LINC01565O15544 149 aa13.98□□□□□ -0.17
LIMS2-210ENST00000413578 PLEKHA8P1O95397 391 aa13.98□□□□□ -0.17
LIMS2-210ENST00000413578 EYA4O95677 639 aa13.98□□□□□ -0.17
LIMS2-210ENST00000413578 DNAJB1P25685 340 aa13.98□□□□□ -0.17
LIMS2-210ENST00000413578 MARK3P27448 753 aa13.98□□□□□ -0.17
LIMS2-210ENST00000413578 MRPS6P82932 125 aaKnown RBP13.98□□□□□ -0.17
LIMS2-210ENST00000413578 ADAM15Q13444 863 aa13.98□□□□□ -0.17
LIMS2-210ENST00000413578 COL9A3Q14050 684 aaPredicted RBP13.98□□□□□ -0.17
LIMS2-210ENST00000413578 BTG3Q14201 252 aaPredicted RBP13.98□□□□□ -0.17
LIMS2-210ENST00000413578 CSPP1Q1MSJ5 1256 aa13.98□□□□□ -0.17
LIMS2-210ENST00000413578 EP400NLQ6ZTU2 488 aa13.98□□□□□ -0.17
LIMS2-210ENST00000413578 RSPH3Q86UC2 560 aa13.98□□□□□ -0.17
LIMS2-210ENST00000413578 SRBD1Q8N5C6 995 aaKnown RBP13.98□□□□□ -0.17
LIMS2-210ENST00000413578 CTCFLQ8NI51 663 aaPredicted RBP13.98□□□□□ -0.17
LIMS2-210ENST00000413578 RUFY2Q8WXA3 655 aa13.98□□□□□ -0.17
LIMS2-210ENST00000413578 MAP4K1Q92918 833 aa13.98□□□□□ -0.17
LIMS2-210ENST00000413578 FBXL18Q96ME1 805 aa13.98□□□□□ -0.17
LIMS2-210ENST00000413578 UIMC1Q96RL1 719 aa13.98□□□□□ -0.17
LIMS2-210ENST00000413578 LZTS2Q9BRK4 669 aa13.98□□□□□ -0.17
LIMS2-210ENST00000413578 ALG13Q9NP73 1137 aaKnown RBP13.98□□□□□ -0.17
LIMS2-210ENST00000413578 MRPL42Q9Y6G3 142 aaKnown RBP13.98□□□□□ -0.17
LIMS2-210ENST00000413578 TTC3P53804 2025 aa13.98□□□□□ -0.17
LIMS2-210ENST00000413578 ATG2AQ2TAZ0 1938 aa13.98□□□□□ -0.17
LIMS2-210ENST00000413578 NLRC5Q86WI3 1866 aa13.97□□□□□ -0.17
LIMS2-210ENST00000413578 MAFGO15525 162 aa13.97□□□□□ -0.17
LIMS2-210ENST00000413578 RPLP2P05387 115 aaKnown RBP13.97□□□□□ -0.17
LIMS2-210ENST00000413578 ITGB1P05556 798 aa13.97□□□□□ -0.17
LIMS2-210ENST00000413578 INSRRP14616 1297 aa13.97□□□□□ -0.17
LIMS2-210ENST00000413578 CD52P31358 61 aa13.97□□□□□ -0.17
LIMS2-210ENST00000413578 KIF5BP33176 963 aa13.97□□□□□ -0.17
LIMS2-210ENST00000413578 CLUL1Q15846 466 aa13.97□□□□□ -0.17
LIMS2-210ENST00000413578 NAALADL2Q58DX5 795 aa13.97□□□□□ -0.17
LIMS2-210ENST00000413578 CMTR2Q8IYT2 770 aaKnown RBP13.97□□□□□ -0.17
LIMS2-210ENST00000413578 ZBTB10Q96DT7 871 aa13.97□□□□□ -0.17
LIMS2-210ENST00000413578 POP1Q99575 1024 aaKnown RBP13.97□□□□□ -0.17
LIMS2-210ENST00000413578 UPF3BQ9BZI7 483 aaKnown RBP13.97□□□□□ -0.17
LIMS2-210ENST00000413578 SMARCAD1Q9H4L7 1026 aa13.97□□□□□ -0.17
LIMS2-210ENST00000413578 PSTPIP2Q9H939 334 aa13.97□□□□□ -0.17
LIMS2-210ENST00000413578 SEC63Q9UGP8 760 aaKnown RBP13.97□□□□□ -0.17
LIMS2-210ENST00000413578 DOCK5Q9H7D0 1870 aa13.96□□□□□ -0.17
LIMS2-210ENST00000413578 RRN3P2A6NIE6 340 aa13.96□□□□□ -0.17
LIMS2-210ENST00000413578 SH2B2O14492 632 aaPredicted RBP13.96□□□□□ -0.17
LIMS2-210ENST00000413578 MRE11P49959 708 aa13.96□□□□□ -0.17
LIMS2-210ENST00000413578 MTMR1Q13613 665 aa13.96□□□□□ -0.17
LIMS2-210ENST00000413578 NPAS4Q8IUM7 802 aa13.96□□□□□ -0.17
LIMS2-210ENST00000413578 SPPL3Q8TCT6 385 aa13.96□□□□□ -0.17
LIMS2-210ENST00000413578 GLG1Q92896 1179 aa13.96□□□□□ -0.17
LIMS2-210ENST00000413578 FTHL17Q9BXU8 183 aa13.96□□□□□ -0.17
LIMS2-210ENST00000413578 JADE2Q9NQC1 790 aa13.96□□□□□ -0.17
LIMS2-210ENST00000413578 CLEC1BQ9P126 229 aa13.96□□□□□ -0.17
LIMS2-210ENST00000413578 MUTYHQ9UIF7 546 aa13.96□□□□□ -0.17
LIMS2-210ENST00000413578 CD207Q9UJ71 328 aa13.96□□□□□ -0.17
LIMS2-210ENST00000413578 TECTAO75443 2155 aa13.96□□□□□ -0.18
LIMS2-210ENST00000413578 IGSF9BQ9UPX0 1349 aa13.95□□□□□ -0.18
LIMS2-210ENST00000413578 KDM3AQ9Y4C1 1321 aa13.95□□□□□ -0.18
LIMS2-210ENST00000413578 GNAQP50148 359 aa13.95□□□□□ -0.18
LIMS2-210ENST00000413578 PLCB4Q15147 1175 aa13.95□□□□□ -0.18
LIMS2-210ENST00000413578 UBE2SQ16763 222 aa13.95□□□□□ -0.18
LIMS2-210ENST00000413578 ADGRD2Q7Z7M1 963 aa13.95□□□□□ -0.18
LIMS2-210ENST00000413578 RNF135Q8IUD6 432 aa13.95□□□□□ -0.18
LIMS2-210ENST00000413578 EFHBQ8N7U6 833 aa13.95□□□□□ -0.18
LIMS2-210ENST00000413578 SMRP1Q8NCR6 262 aa13.95□□□□□ -0.18
LIMS2-210ENST00000413578 JPH1Q9HDC5 661 aaPredicted RBP13.95□□□□□ -0.18
LIMS2-210ENST00000413578 PKD2L1Q9P0L9 805 aa13.95□□□□□ -0.18
LIMS2-210ENST00000413578 PADI3Q9ULW8 664 aa13.95□□□□□ -0.18
LIMS2-210ENST00000413578 TRPV2Q9Y5S1 764 aa13.95□□□□□ -0.18
LIMS2-210ENST00000413578 RBM8AQ9Y5S9 174 aaKnown RBP13.95□□□□□ -0.18
LIMS2-210ENST00000413578 C5orf42Q9H799 3197 aa13.95□□□□□ -0.18
LIMS2-210ENST00000413578 WDFY4Q6ZS81 3184 aa13.94□□□□□ -0.18
LIMS2-210ENST00000413578 STXBP3O00186 592 aa13.94□□□□□ -0.18
LIMS2-210ENST00000413578 PRC1O43663 620 aa13.94□□□□□ -0.18
LIMS2-210ENST00000413578 TRIOO75962 3097 aa13.94□□□□□ -0.18
LIMS2-210ENST00000413578 GLP2RO95838 553 aa13.94□□□□□ -0.18
LIMS2-210ENST00000413578 RXRAP19793 462 aa13.94□□□□□ -0.18
LIMS2-210ENST00000413578 LIFRP42702 1097 aa13.94□□□□□ -0.18
LIMS2-210ENST00000413578 IGBP1P78318 339 aa13.94□□□□□ -0.18
LIMS2-210ENST00000413578 COASYQ13057 564 aa13.94□□□□□ -0.18
LIMS2-210ENST00000413578 CBX2Q14781 532 aaPredicted RBP13.94□□□□□ -0.18
LIMS2-210ENST00000413578 IER5Q5VY09 327 aa13.94□□□□□ -0.18
LIMS2-210ENST00000413578 PLPPR4Q7Z2D5 763 aa13.94□□□□□ -0.18
LIMS2-210ENST00000413578 BMP8AQ7Z5Y6 402 aa13.94□□□□□ -0.18
LIMS2-210ENST00000413578 CMTR1Q8N1G2 835 aaKnown RBP13.94□□□□□ -0.18
LIMS2-210ENST00000413578 KLHL23Q8NBE8 558 aa13.94□□□□□ -0.18
LIMS2-210ENST00000413578 POF1BQ8WVV4 589 aa13.94□□□□□ -0.18
LIMS2-210ENST00000413578 EDAQ92838 391 aa13.94□□□□□ -0.18
LIMS2-210ENST00000413578 FAM49AQ9H0Q0 323 aaPredicted RBP13.94□□□□□ -0.18
LIMS2-210ENST00000413578 TMX1Q9H3N1 280 aa13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms