RNA–Protein interactions for RNA: ENST00000413380.5

HDAC9-206, Transcript of histone deacetylase 9, humanhuman

TSL 3

Gene HDAC9, Length 799 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-206ENST00000413380 PKD2L1Q9P0L9 805 aa13.03□□□□□ -0.32
HDAC9-206ENST00000413380 PCDHA10Q9Y5I2 948 aa13.03□□□□□ -0.32
HDAC9-206ENST00000413380 EMSYQ7Z589 1322 aa13.03□□□□□ -0.32
HDAC9-206ENST00000413380 IGSF9BQ9UPX0 1349 aa13.03□□□□□ -0.32
HDAC9-206ENST00000413380 KAT6AQ92794 2004 aa13.03□□□□□ -0.32
HDAC9-206ENST00000413380 GSTTP1A0A1W2PQM5 241 aa13.02□□□□□ -0.33
HDAC9-206ENST00000413380 A6NJR5 290 aa13.02□□□□□ -0.33
HDAC9-206ENST00000413380 GALR2O43603 387 aaPredicted RBP13.02□□□□□ -0.33
HDAC9-206ENST00000413380 SLITRK3O94933 977 aa13.02□□□□□ -0.33
HDAC9-206ENST00000413380 MBD3O95983 291 aa13.02□□□□□ -0.33
HDAC9-206ENST00000413380 P4HBP07237 508 aaKnown RBP13.02□□□□□ -0.33
HDAC9-206ENST00000413380 SUPT20HL2P0C7V6 817 aa13.02□□□□□ -0.33
HDAC9-206ENST00000413380 CDC25AP30304 524 aa13.02□□□□□ -0.33
HDAC9-206ENST00000413380 NDUFA8P51970 172 aa13.02□□□□□ -0.33
HDAC9-206ENST00000413380 GJA9P57773 515 aa13.02□□□□□ -0.33
HDAC9-206ENST00000413380 FAM160A1Q05DH4 1040 aa13.02□□□□□ -0.33
HDAC9-206ENST00000413380 GRB10Q13322 594 aa13.02□□□□□ -0.33
HDAC9-206ENST00000413380 HSDL1Q3SXM5 330 aa13.02□□□□□ -0.33
HDAC9-206ENST00000413380 SPECC1Q5M775 1068 aa13.02□□□□□ -0.33
HDAC9-206ENST00000413380 FBXO46Q6PJ61 603 aaPredicted RBP13.02□□□□□ -0.33
HDAC9-206ENST00000413380 MIER3Q7Z3K6 550 aa13.02□□□□□ -0.33
HDAC9-206ENST00000413380 CATSPER3Q86XQ3 398 aa13.02□□□□□ -0.33
HDAC9-206ENST00000413380 AFAP1L1Q8TED9 768 aa13.02□□□□□ -0.33
HDAC9-206ENST00000413380 SNX29Q8TEQ0 813 aa13.02□□□□□ -0.33
HDAC9-206ENST00000413380 SEPT1Q8WYJ6 367 aa13.02□□□□□ -0.33
HDAC9-206ENST00000413380 COPS5Q92905 334 aa13.02□□□□□ -0.33
HDAC9-206ENST00000413380 UIMC1Q96RL1 719 aa13.02□□□□□ -0.33
HDAC9-206ENST00000413380 NT5C3AQ9H0P0 336 aa13.02□□□□□ -0.33
HDAC9-206ENST00000413380 MLXIPQ9HAP2 919 aa13.02□□□□□ -0.33
HDAC9-206ENST00000413380 USP25Q9UHP3 1055 aa13.02□□□□□ -0.33
HDAC9-206ENST00000413380 KCNH3Q9ULD8 1083 aa13.02□□□□□ -0.33
HDAC9-206ENST00000413380 A0A087X0B3 334 aa13.01□□□□□ -0.33
HDAC9-206ENST00000413380 A0A1B0GVL5 298 aa13.01□□□□□ -0.33
HDAC9-206ENST00000413380 DDX39AO00148 427 aaKnown RBP13.01□□□□□ -0.33
HDAC9-206ENST00000413380 CTAGE5O15320 804 aa13.01□□□□□ -0.33
HDAC9-206ENST00000413380 CHMP2AO43633 222 aa13.01□□□□□ -0.33
HDAC9-206ENST00000413380 MSCO60682 206 aa13.01□□□□□ -0.33
HDAC9-206ENST00000413380 PPFIA4O75335 1185 aa13.01□□□□□ -0.33
HDAC9-206ENST00000413380 MED24O75448 989 aa13.01□□□□□ -0.33
HDAC9-206ENST00000413380 PSAPP07602 524 aa13.01□□□□□ -0.33
HDAC9-206ENST00000413380 LIG1P18858 919 aa13.01□□□□□ -0.33
HDAC9-206ENST00000413380 CCND3P30281 292 aaPredicted RBP13.01□□□□□ -0.33
HDAC9-206ENST00000413380 ECM1Q16610 540 aa13.01□□□□□ -0.33
HDAC9-206ENST00000413380 NAALADL2Q58DX5 795 aa13.01□□□□□ -0.33
HDAC9-206ENST00000413380 GJC2Q5T442 439 aaPredicted RBP13.01□□□□□ -0.33
HDAC9-206ENST00000413380 MIS18BP1Q6P0N0 1132 aa13.01□□□□□ -0.33
HDAC9-206ENST00000413380 CCDC73Q6ZRK6 1079 aa13.01□□□□□ -0.33
HDAC9-206ENST00000413380 TLK2Q86UE8 772 aa13.01□□□□□ -0.33
HDAC9-206ENST00000413380 CCDC60Q8IWA6 550 aaPredicted RBP13.01□□□□□ -0.33
HDAC9-206ENST00000413380 C4orf19Q8IY42 314 aa13.01□□□□□ -0.33
HDAC9-206ENST00000413380 ELOA2Q8IYF1 753 aaPredicted RBP13.01□□□□□ -0.33
HDAC9-206ENST00000413380 GPT2Q8TD30 523 aa13.01□□□□□ -0.33
HDAC9-206ENST00000413380 LRRC15Q8TF66 581 aa13.01□□□□□ -0.33
HDAC9-206ENST00000413380 TIGD1Q96MW7 591 aa13.01□□□□□ -0.33
HDAC9-206ENST00000413380 SPATA33Q96N06 139 aa13.01□□□□□ -0.33
HDAC9-206ENST00000413380 PNMA5Q96PV4 448 aa13.01□□□□□ -0.33
HDAC9-206ENST00000413380 PCYT2Q99447 389 aa13.01□□□□□ -0.33
HDAC9-206ENST00000413380 CUEDC2Q9H467 287 aa13.01□□□□□ -0.33
HDAC9-206ENST00000413380 STK17AQ9UEE5 414 aa13.01□□□□□ -0.33
HDAC9-206ENST00000413380 TELO2Q9Y4R8 837 aa13.01□□□□□ -0.33
HDAC9-206ENST00000413380 MAFBQ9Y5Q3 323 aaPredicted RBP13.01□□□□□ -0.33
HDAC9-206ENST00000413380 POTEB3A0JP26 581 aa13□□□□□ -0.33
HDAC9-206ENST00000413380 DKC1O60832 514 aaKnown RBP eCLIP13□□□□□ -0.33
HDAC9-206ENST00000413380 ADAMTS4O75173 837 aa13□□□□□ -0.33
HDAC9-206ENST00000413380 MMP3P08254 477 aa13□□□□□ -0.33
HDAC9-206ENST00000413380 XRCC6P12956 609 aaKnown RBP eCLIP13□□□□□ -0.33
HDAC9-206ENST00000413380 CST5P28325 142 aaPredicted RBP13□□□□□ -0.33
HDAC9-206ENST00000413380 TCF7P36402 384 aaPredicted RBP13□□□□□ -0.33
HDAC9-206ENST00000413380 CCT6AP40227 531 aaKnown RBP13□□□□□ -0.33
HDAC9-206ENST00000413380 SYKP43405 635 aa13□□□□□ -0.33
HDAC9-206ENST00000413380 QARSP47897 775 aaKnown RBP13□□□□□ -0.33
HDAC9-206ENST00000413380 SLC26A2P50443 739 aa13□□□□□ -0.33
HDAC9-206ENST00000413380 PSMC5P62195 406 aa13□□□□□ -0.33
HDAC9-206ENST00000413380 KARSQ15046 597 aaKnown RBP13□□□□□ -0.33
HDAC9-206ENST00000413380 KLHL40Q2TBA0 621 aa13□□□□□ -0.33
HDAC9-206ENST00000413380 POTEBQ6S5H4 581 aa13□□□□□ -0.33
HDAC9-206ENST00000413380 PLPPR4Q7Z2D5 763 aa13□□□□□ -0.33
HDAC9-206ENST00000413380 OR6J1Q8NGC5 347 aa13□□□□□ -0.33
HDAC9-206ENST00000413380 AFG1LQ8WV93 481 aa13□□□□□ -0.33
HDAC9-206ENST00000413380 ATP6V0A1Q93050 837 aa13□□□□□ -0.33
HDAC9-206ENST00000413380 ARMC5Q96C12 935 aa13□□□□□ -0.33
HDAC9-206ENST00000413380 CALML4Q96GE6 196 aa13□□□□□ -0.33
HDAC9-206ENST00000413380 DYDC2Q96IM9 177 aa13□□□□□ -0.33
HDAC9-206ENST00000413380 LXNQ9BS40 222 aa13□□□□□ -0.33
HDAC9-206ENST00000413380 ZSWIM4Q9H7M6 989 aa13□□□□□ -0.33
HDAC9-206ENST00000413380 MAGEF1Q9HAY2 307 aa13□□□□□ -0.33
HDAC9-206ENST00000413380 HMX1Q9NP08 348 aaPredicted RBP13□□□□□ -0.33
HDAC9-206ENST00000413380 RTN4Q9NQC3 1192 aaKnown RBP13□□□□□ -0.33
HDAC9-206ENST00000413380 PAK6Q9NQU5 681 aaPredicted RBP13□□□□□ -0.33
HDAC9-206ENST00000413380 RGL1Q9NZL6 768 aa13□□□□□ -0.33
HDAC9-206ENST00000413380 WRAP73Q9P2S5 460 aaPredicted RBP13□□□□□ -0.33
HDAC9-206ENST00000413380 CCDC39Q9UFE4 941 aa13□□□□□ -0.33
HDAC9-206ENST00000413380 DDX20Q9UHI6 824 aaKnown RBP13□□□□□ -0.33
HDAC9-206ENST00000413380 MYH11P35749 1972 aa13□□□□□ -0.33
HDAC9-206ENST00000413380 SYNRGQ9UMZ2 1314 aa12.99□□□□□ -0.33
HDAC9-206ENST00000413380 NOP56O00567 594 aaKnown RBP12.99□□□□□ -0.33
HDAC9-206ENST00000413380 POLR2DO15514 142 aaKnown RBP12.99□□□□□ -0.33
HDAC9-206ENST00000413380 ACTN4O43707 911 aaKnown RBP12.99□□□□□ -0.33
HDAC9-206ENST00000413380 ZNF862O60290 1169 aa12.99□□□□□ -0.33
HDAC9-206ENST00000413380 NR1I2O75469 434 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms