RNA–Protein interactions for RNA: ENST00000411739.6

NEDD1-202, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 2 BASIC

Gene NEDD1, Length 2,490 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-202ENST00000411739 C9orf50Q5SZB4 431 aa13.53□□□□□ -0.24
NEDD1-202ENST00000411739 PPP4R3AQ6IN85 833 aa13.53□□□□□ -0.24
NEDD1-202ENST00000411739 MIS18BP1Q6P0N0 1132 aa13.53□□□□□ -0.24
NEDD1-202ENST00000411739 SESTD1Q86VW0 696 aa13.53□□□□□ -0.24
NEDD1-202ENST00000411739 PRO3102Q9H379 93 aa13.53□□□□□ -0.24
NEDD1-202ENST00000411739 ZNF302Q9NR11 478 aa13.53□□□□□ -0.24
NEDD1-202ENST00000411739 GABBR1Q9UBS5 961 aa13.53□□□□□ -0.24
NEDD1-202ENST00000411739 H3BQV1 296 aa13.53□□□□□ -0.24
NEDD1-202ENST00000411739 K7ELQ4 463 aaPredicted RBP13.53□□□□□ -0.24
NEDD1-202ENST00000411739 INSRRP14616 1297 aa13.53□□□□□ -0.24
NEDD1-202ENST00000411739 ATP4AP20648 1035 aa13.53□□□□□ -0.24
NEDD1-202ENST00000411739 LARP1BQ659C4 914 aaKnown RBP13.53□□□□□ -0.24
NEDD1-202ENST00000411739 MFSD5Q6N075 450 aa13.53□□□□□ -0.24
NEDD1-202ENST00000411739 ZNF746Q6NUN9 644 aaPredicted RBP13.53□□□□□ -0.24
NEDD1-202ENST00000411739 PDXDC2PQ6P474 469 aa13.53□□□□□ -0.24
NEDD1-202ENST00000411739 MOXD1Q6UVY6 613 aa13.53□□□□□ -0.24
NEDD1-202ENST00000411739 LMBR1Q8WVP7 490 aa13.53□□□□□ -0.24
NEDD1-202ENST00000411739 RIT2Q99578 217 aa13.53□□□□□ -0.24
NEDD1-202ENST00000411739 FOXP1Q9H334 677 aaPredicted RBP13.53□□□□□ -0.24
NEDD1-202ENST00000411739 KCNMB3Q9NPA1 279 aa13.53□□□□□ -0.24
NEDD1-202ENST00000411739 DISC1Q9NRI5 854 aa13.53□□□□□ -0.24
NEDD1-202ENST00000411739 EMSYQ7Z589 1322 aa13.52□□□□□ -0.24
NEDD1-202ENST00000411739 EML1O00423 815 aa13.52□□□□□ -0.24
NEDD1-202ENST00000411739 KRT76Q01546 638 aa13.52□□□□□ -0.24
NEDD1-202ENST00000411739 FPGSQ05932 587 aa13.52□□□□□ -0.24
NEDD1-202ENST00000411739 PPFIA1Q13136 1202 aa13.52□□□□□ -0.24
NEDD1-202ENST00000411739 UGCGQ16739 394 aa13.52□□□□□ -0.24
NEDD1-202ENST00000411739 C16orf59Q7L2K0 433 aa13.52□□□□□ -0.24
NEDD1-202ENST00000411739 DEFB128Q7Z7B8 93 aa13.52□□□□□ -0.24
NEDD1-202ENST00000411739 NOSTRINQ8IVI9 506 aa13.52□□□□□ -0.24
NEDD1-202ENST00000411739 CKAP2LQ8IYA6 745 aa13.52□□□□□ -0.24
NEDD1-202ENST00000411739 IL27Q8NEV9 243 aa13.52□□□□□ -0.24
NEDD1-202ENST00000411739 SEZ6LQ9BYH1 1024 aa13.52□□□□□ -0.24
NEDD1-202ENST00000411739 TMEM60Q9H2L4 133 aa13.52□□□□□ -0.24
NEDD1-202ENST00000411739 PCDHA10Q9Y5I2 948 aa13.52□□□□□ -0.24
NEDD1-202ENST00000411739 LTBP2Q14767 1821 aa13.52□□□□□ -0.24
NEDD1-202ENST00000411739 IGKV6D-21A0A0A0MT36 114 aa13.52□□□□□ -0.25
NEDD1-202ENST00000411739 SHHQ15465 462 aa13.52□□□□□ -0.25
NEDD1-202ENST00000411739 GRIK4Q16099 956 aa13.52□□□□□ -0.25
NEDD1-202ENST00000411739 RUFY4Q6ZNE9 571 aa13.52□□□□□ -0.25
NEDD1-202ENST00000411739 MIER3Q7Z3K6 550 aa13.52□□□□□ -0.25
NEDD1-202ENST00000411739 WDR64B1ANS9 1081 aa13.51□□□□□ -0.25
NEDD1-202ENST00000411739 PSAPP07602 524 aa13.51□□□□□ -0.25
NEDD1-202ENST00000411739 GCFC2P16383 781 aaKnown RBP13.51□□□□□ -0.25
NEDD1-202ENST00000411739 PLPPR4Q7Z2D5 763 aa13.51□□□□□ -0.25
NEDD1-202ENST00000411739 SH2D3AQ9BRG2 576 aa13.51□□□□□ -0.25
NEDD1-202ENST00000411739 KIF3AQ9Y496 699 aa13.51□□□□□ -0.25
NEDD1-202ENST00000411739 POTEB3A0JP26 581 aa13.51□□□□□ -0.25
NEDD1-202ENST00000411739 TMEM150BA6NC51 233 aa13.51□□□□□ -0.25
NEDD1-202ENST00000411739 THPOP40225 353 aa13.51□□□□□ -0.25
NEDD1-202ENST00000411739 TXKP42681 527 aa13.51□□□□□ -0.25
NEDD1-202ENST00000411739 TOB1P50616 345 aaPredicted RBP13.51□□□□□ -0.25
NEDD1-202ENST00000411739 CALCRLQ16602 461 aa13.51□□□□□ -0.25
NEDD1-202ENST00000411739 HABP4Q5JVS0 413 aaKnown RBP13.51□□□□□ -0.25
NEDD1-202ENST00000411739 MARCH8Q5T0T0 291 aa13.51□□□□□ -0.25
NEDD1-202ENST00000411739 FAM160B1Q5W0V3 765 aa13.51□□□□□ -0.25
NEDD1-202ENST00000411739 POTEBQ6S5H4 581 aa13.51□□□□□ -0.25
NEDD1-202ENST00000411739 TMEM199Q8N511 208 aa13.51□□□□□ -0.25
NEDD1-202ENST00000411739 BANK1Q8NDB2 785 aa13.51□□□□□ -0.25
NEDD1-202ENST00000411739 VAV3Q9UKW4 847 aa13.51□□□□□ -0.25
NEDD1-202ENST00000411739 ZNF862O60290 1169 aa13.5□□□□□ -0.25
NEDD1-202ENST00000411739 CTSHP09668 335 aa13.5□□□□□ -0.25
NEDD1-202ENST00000411739 CKBP12277 381 aa13.5□□□□□ -0.25
NEDD1-202ENST00000411739 U2AF2P26368 475 aaKnown RBP eCLIP13.5□□□□□ -0.25
NEDD1-202ENST00000411739 ZNF618Q5T7W0 954 aa13.5□□□□□ -0.25
NEDD1-202ENST00000411739 NCAPH2Q6IBW4 605 aa13.5□□□□□ -0.25
NEDD1-202ENST00000411739 FERMT3Q86UX7 667 aa13.5□□□□□ -0.25
NEDD1-202ENST00000411739 SMAP1Q8IYB5 467 aaPredicted RBP13.5□□□□□ -0.25
NEDD1-202ENST00000411739 RETREG2Q8NC44 543 aa13.5□□□□□ -0.25
NEDD1-202ENST00000411739 OSBPL7Q9BZF2 842 aa13.5□□□□□ -0.25
NEDD1-202ENST00000411739 LAMA2P24043 3122 aaKnown RBP13.5□□□□□ -0.25
NEDD1-202ENST00000411739 VPS37CA5D8V6 355 aaPredicted RBP13.5□□□□□ -0.25
NEDD1-202ENST00000411739 NEMFO60524 1076 aa13.5□□□□□ -0.25
NEDD1-202ENST00000411739 IQCF3P0C7M6 154 aa13.5□□□□□ -0.25
NEDD1-202ENST00000411739 HOXC8P31273 242 aa13.5□□□□□ -0.25
NEDD1-202ENST00000411739 BMP8BP34820 402 aa13.5□□□□□ -0.25
NEDD1-202ENST00000411739 PTK7Q13308 1070 aa13.5□□□□□ -0.25
NEDD1-202ENST00000411739 TRIM71Q2Q1W2 868 aaKnown RBP13.5□□□□□ -0.25
NEDD1-202ENST00000411739 TTC38Q5R3I4 469 aa13.5□□□□□ -0.25
NEDD1-202ENST00000411739 B3GNT9Q6UX72 402 aa13.5□□□□□ -0.25
NEDD1-202ENST00000411739 SERINC5Q86VE9 423 aa13.5□□□□□ -0.25
NEDD1-202ENST00000411739 HSCBQ8IWL3 235 aa13.5□□□□□ -0.25
NEDD1-202ENST00000411739 SNX21Q969T3 373 aa13.5□□□□□ -0.25
NEDD1-202ENST00000411739 VWCEQ96DN2 955 aa13.5□□□□□ -0.25
NEDD1-202ENST00000411739 FAM20AQ96MK3 541 aa13.5□□□□□ -0.25
NEDD1-202ENST00000411739 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.5□□□□□ -0.25
NEDD1-202ENST00000411739 FAM49AQ9H0Q0 323 aaPredicted RBP13.5□□□□□ -0.25
NEDD1-202ENST00000411739 PCDHB6Q9Y5E3 794 aa13.5□□□□□ -0.25
NEDD1-202ENST00000411739 MAFBQ9Y5Q3 323 aaPredicted RBP13.5□□□□□ -0.25
NEDD1-202ENST00000411739 NRCAMQ92823 1304 aa13.49□□□□□ -0.25
NEDD1-202ENST00000411739 ADAM17P78536 824 aa13.49□□□□□ -0.25
NEDD1-202ENST00000411739 BFSP2Q13515 415 aa13.49□□□□□ -0.25
NEDD1-202ENST00000411739 ZNF365Q70YC5 407 aa13.49□□□□□ -0.25
NEDD1-202ENST00000411739 TDHQ8IZJ6 230 aa13.49□□□□□ -0.25
NEDD1-202ENST00000411739 AFAP1L1Q8TED9 768 aa13.49□□□□□ -0.25
NEDD1-202ENST00000411739 NAP1L4Q99733 375 aaKnown RBP13.49□□□□□ -0.25
NEDD1-202ENST00000411739 RGL1Q9NZL6 768 aa13.49□□□□□ -0.25
NEDD1-202ENST00000411739 SCN5AQ14524 2016 aa13.49□□□□□ -0.25
NEDD1-202ENST00000411739 A0A087WWV3 80 aa13.49□□□□□ -0.25
NEDD1-202ENST00000411739 BAG4O95429 457 aaKnown RBP13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms