RNA–Protein interactions for RNA: ENST00000409953.5

UBE2F-204, Transcript of ubiquitin conjugating enzyme E2 F (putative), humanhuman

TSL 3 BASIC

Gene UBE2F, Length 924 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2F-204ENST00000409953 MIGA1Q8NAN2 632 aa8.42□□□□□ -1.06
UBE2F-204ENST00000409953 KIFC2Q96AC6 838 aa8.42□□□□□ -1.06
UBE2F-204ENST00000409953 BCO2Q9BYV7 579 aa8.42□□□□□ -1.06
UBE2F-204ENST00000409953 RNF146Q9NTX7 359 aa8.42□□□□□ -1.06
UBE2F-204ENST00000409953 IGSF9Q9P2J2 1179 aa8.42□□□□□ -1.06
UBE2F-204ENST00000409953 IL16Q14005 1332 aa8.42□□□□□ -1.06
UBE2F-204ENST00000409953 DOPEY1Q5JWR5 2465 aa8.41□□□□□ -1.06
UBE2F-204ENST00000409953 FSCN2O14926 492 aa8.41□□□□□ -1.06
UBE2F-204ENST00000409953 C1QL1O75973 258 aa8.41□□□□□ -1.06
UBE2F-204ENST00000409953 ARID4AP29374 1257 aaPredicted RBP8.41□□□□□ -1.06
UBE2F-204ENST00000409953 NOVA1P51513 510 aaKnown RBP8.41□□□□□ -1.06
UBE2F-204ENST00000409953 OAZ1P54368 228 aa8.41□□□□□ -1.06
UBE2F-204ENST00000409953 PAN2Q504Q3 1202 aaKnown RBP8.41□□□□□ -1.06
UBE2F-204ENST00000409953 ATAT1Q5SQI0 421 aa8.41□□□□□ -1.06
UBE2F-204ENST00000409953 PDE12Q6L8Q7 609 aaKnown RBP8.41□□□□□ -1.06
UBE2F-204ENST00000409953 OTOP3Q7RTS5 596 aa8.41□□□□□ -1.06
UBE2F-204ENST00000409953 ZNF605Q86T29 641 aa8.41□□□□□ -1.06
UBE2F-204ENST00000409953 PROSER1Q86XN7 944 aa8.41□□□□□ -1.06
UBE2F-204ENST00000409953 LRRC47Q8N1G4 583 aaKnown RBP8.41□□□□□ -1.06
UBE2F-204ENST00000409953 KCTD17Q8N5Z5 321 aa8.41□□□□□ -1.06
UBE2F-204ENST00000409953 RGS22Q8NE09 1264 aa8.41□□□□□ -1.06
UBE2F-204ENST00000409953 GPR152Q8TDT2 470 aa8.41□□□□□ -1.06
UBE2F-204ENST00000409953 CDHR5Q9HBB8 845 aa8.41□□□□□ -1.06
UBE2F-204ENST00000409953 TEX15Q9BXT5 2789 aa8.4□□□□□ -1.06
UBE2F-204ENST00000409953 FREM2Q5SZK8 3169 aa8.4□□□□□ -1.06
UBE2F-204ENST00000409953 GIPC1O14908 333 aa8.4□□□□□ -1.06
UBE2F-204ENST00000409953 SRFP11831 508 aa8.4□□□□□ -1.06
UBE2F-204ENST00000409953 CYP7A1P22680 504 aa8.4□□□□□ -1.06
UBE2F-204ENST00000409953 PSEN2P49810 448 aa8.4□□□□□ -1.06
UBE2F-204ENST00000409953 EMP3P54852 163 aa8.4□□□□□ -1.06
UBE2F-204ENST00000409953 SRSF1Q07955 248 aaKnown RBP eCLIP8.4□□□□□ -1.06
UBE2F-204ENST00000409953 APOBRQ0VD83 1088 aa8.4□□□□□ -1.06
UBE2F-204ENST00000409953 GORABQ5T7V8 394 aa8.4□□□□□ -1.06
UBE2F-204ENST00000409953 STPG1Q5TH74 334 aa8.4□□□□□ -1.06
UBE2F-204ENST00000409953 CCDC149Q6ZUS6 474 aa8.4□□□□□ -1.06
UBE2F-204ENST00000409953 SERINC5Q86VE9 423 aa8.4□□□□□ -1.06
UBE2F-204ENST00000409953 C12orf76Q8N812 135 aaPredicted RBP8.4□□□□□ -1.06
UBE2F-204ENST00000409953 AFG1LQ8WV93 481 aa8.4□□□□□ -1.06
UBE2F-204ENST00000409953 RSAD2Q8WXG1 361 aa8.4□□□□□ -1.06
UBE2F-204ENST00000409953 NEUROD6Q96NK8 337 aa8.4□□□□□ -1.06
UBE2F-204ENST00000409953 MYL10Q9BUA6 226 aa8.4□□□□□ -1.06
UBE2F-204ENST00000409953 C1orf115Q9H7X2 142 aa8.4□□□□□ -1.06
UBE2F-204ENST00000409953 AAASQ9NRG9 546 aa8.4□□□□□ -1.06
UBE2F-204ENST00000409953 SNRKQ9NRH2 765 aa8.4□□□□□ -1.06
UBE2F-204ENST00000409953 CYP39A1Q9NYL5 469 aa8.4□□□□□ -1.06
UBE2F-204ENST00000409953 PA2G4Q9UQ80 394 aaKnown RBP8.4□□□□□ -1.06
UBE2F-204ENST00000409953 HCFC2Q9Y5Z7 792 aa8.4□□□□□ -1.06
UBE2F-204ENST00000409953 LCTP09848 1927 aa8.4□□□□□ -1.06
UBE2F-204ENST00000409953 DENND4AQ7Z401 1863 aa8.4□□□□□ -1.07
UBE2F-204ENST00000409953 ABCA12Q86UK0 2595 aa8.4□□□□□ -1.07
UBE2F-204ENST00000409953 ASXL3Q9C0F0 2248 aa8.39□□□□□ -1.07
UBE2F-204ENST00000409953 RALGAPA1Q6GYQ0 2036 aa8.39□□□□□ -1.07
UBE2F-204ENST00000409953 SPTAN1Q13813 2472 aaKnown RBP8.39□□□□□ -1.07
UBE2F-204ENST00000409953 MIA3Q5JRA6 1907 aa8.39□□□□□ -1.07
UBE2F-204ENST00000409953 TICRRQ7Z2Z1 1910 aa8.39□□□□□ -1.07
UBE2F-204ENST00000409953 KALRNO60229 2985 aa8.39□□□□□ -1.07
UBE2F-204ENST00000409953 HIDE1A8MVS5 230 aa8.39□□□□□ -1.07
UBE2F-204ENST00000409953 J3QKU1 62 aa8.39□□□□□ -1.07
UBE2F-204ENST00000409953 CYP2E1P05181 493 aaPredicted RBP8.39□□□□□ -1.07
UBE2F-204ENST00000409953 ALDH5A1P51649 535 aaPredicted RBP8.39□□□□□ -1.07
UBE2F-204ENST00000409953 WDR43Q15061 677 aaKnown RBP eCLIP8.39□□□□□ -1.07
UBE2F-204ENST00000409953 NONOQ15233 471 aaKnown RBP eCLIP8.39□□□□□ -1.07
UBE2F-204ENST00000409953 KIAA0753Q2KHM9 967 aa8.39□□□□□ -1.07
UBE2F-204ENST00000409953 KANK3Q6NY19 840 aa8.39□□□□□ -1.07
UBE2F-204ENST00000409953 DCLRE1AQ6PJP8 1040 aa8.39□□□□□ -1.07
UBE2F-204ENST00000409953 ARHGAP30Q7Z6I6 1101 aaPredicted RBP8.39□□□□□ -1.07
UBE2F-204ENST00000409953 CERS3Q8IU89 383 aa8.39□□□□□ -1.07
UBE2F-204ENST00000409953 ZNF687Q8N1G0 1237 aa8.39□□□□□ -1.07
UBE2F-204ENST00000409953 CELF5Q8N6W0 485 aaKnown RBP8.39□□□□□ -1.07
UBE2F-204ENST00000409953 TTC13Q8NBP0 860 aa8.39□□□□□ -1.07
UBE2F-204ENST00000409953 SPATA18Q8TC71 538 aa8.39□□□□□ -1.07
UBE2F-204ENST00000409953 SCFD2Q8WU76 684 aa8.39□□□□□ -1.07
UBE2F-204ENST00000409953 LRIG1Q96JA1 1093 aa8.39□□□□□ -1.07
UBE2F-204ENST00000409953 GPR20Q99678 358 aa8.39□□□□□ -1.07
UBE2F-204ENST00000409953 KATNAL1Q9BW62 490 aa8.39□□□□□ -1.07
UBE2F-204ENST00000409953 ENTPD7Q9NQZ7 604 aa8.39□□□□□ -1.07
UBE2F-204ENST00000409953 PPP1R3GB7ZBB8 358 aa8.38□□□□□ -1.07
UBE2F-204ENST00000409953 APAF1O14727 1248 aa8.38□□□□□ -1.07
UBE2F-204ENST00000409953 FGF18O76093 207 aa8.38□□□□□ -1.07
UBE2F-204ENST00000409953 CLSTN1O94985 981 aa8.38□□□□□ -1.07
UBE2F-204ENST00000409953 TXNP10599 105 aaKnown RBP8.38□□□□□ -1.07
UBE2F-204ENST00000409953 CASTP20810 708 aaKnown RBP8.38□□□□□ -1.07
UBE2F-204ENST00000409953 TROAPQ12815 778 aa8.38□□□□□ -1.07
UBE2F-204ENST00000409953 SF3A2Q15428 464 aaKnown RBP8.38□□□□□ -1.07
UBE2F-204ENST00000409953 NSMFQ6X4W1 530 aa8.38□□□□□ -1.07
UBE2F-204ENST00000409953 TICAM2Q86XR7 235 aa8.38□□□□□ -1.07
UBE2F-204ENST00000409953 C12orf50Q8NA57 414 aaPredicted RBP8.38□□□□□ -1.07
UBE2F-204ENST00000409953 MARVELD3Q96A59 401 aa8.38□□□□□ -1.07
UBE2F-204ENST00000409953 DYNLL2Q96FJ2 89 aa8.38□□□□□ -1.07
UBE2F-204ENST00000409953 TRERF1Q96PN7 1200 aa8.38□□□□□ -1.07
UBE2F-204ENST00000409953 TCF25Q9BQ70 676 aa8.38□□□□□ -1.07
UBE2F-204ENST00000409953 FAM126AQ9BYI3 521 aaPredicted RBP8.38□□□□□ -1.07
UBE2F-204ENST00000409953 KANSL2Q9H9L4 492 aa8.38□□□□□ -1.07
UBE2F-204ENST00000409953 TMEM260Q9NX78 707 aa8.38□□□□□ -1.07
UBE2F-204ENST00000409953 MCM9Q9NXL9 1143 aa8.38□□□□□ -1.07
UBE2F-204ENST00000409953 ADD3Q9UEY8 706 aaKnown RBP8.38□□□□□ -1.07
UBE2F-204ENST00000409953 SWAP70Q9UH65 585 aa8.38□□□□□ -1.07
UBE2F-204ENST00000409953 AKAP2Q9Y2D5 859 aa8.38□□□□□ -1.07
UBE2F-204ENST00000409953 PCDHB12Q9Y5F1 795 aa8.38□□□□□ -1.07
UBE2F-204ENST00000409953 TTC3P53804 2025 aa8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms