RNA–Protein interactions for RNA: ENST00000409952.3

LSM5-205, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 4 BASIC

Gene LSM5, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-205ENST00000409952 PCDHGA9Q9Y5G4 932 aaKnown RBP6.06□□□□□ -1.44
LSM5-205ENST00000409952 PCDHGA8Q9Y5G5 932 aa6.06□□□□□ -1.44
LSM5-205ENST00000409952 PCDHGA7Q9Y5G6 932 aa6.06□□□□□ -1.44
LSM5-205ENST00000409952 PCDHGA6Q9Y5G7 932 aa6.06□□□□□ -1.44
LSM5-205ENST00000409952 PCDHGA3Q9Y5H0 932 aa6.06□□□□□ -1.44
LSM5-205ENST00000409952 PCDHGA2Q9Y5H1 932 aa6.06□□□□□ -1.44
LSM5-205ENST00000409952 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.06□□□□□ -1.44
LSM5-205ENST00000409952 SHISA3A0PJX4 238 aa6.05□□□□□ -1.44
LSM5-205ENST00000409952 KLHL33A6NCF5 533 aa6.05□□□□□ -1.44
LSM5-205ENST00000409952 BIN1O00499 593 aa6.05□□□□□ -1.44
LSM5-205ENST00000409952 CTNND1O60716 968 aaKnown RBP6.05□□□□□ -1.44
LSM5-205ENST00000409952 SOD2P04179 222 aa6.05□□□□□ -1.44
LSM5-205ENST00000409952 CKMP06732 381 aa6.05□□□□□ -1.44
LSM5-205ENST00000409952 FAM163BP0C2L3 166 aa6.05□□□□□ -1.44
LSM5-205ENST00000409952 AKAP5P24588 427 aa6.05□□□□□ -1.44
LSM5-205ENST00000409952 TPP2P29144 1249 aaPredicted RBP6.05□□□□□ -1.44
LSM5-205ENST00000409952 GDNFP39905 211 aa6.05□□□□□ -1.44
LSM5-205ENST00000409952 MECP2P51608 486 aaKnown RBP6.05□□□□□ -1.44
LSM5-205ENST00000409952 HTRA3P83110 453 aa6.05□□□□□ -1.44
LSM5-205ENST00000409952 AMPD2Q01433 879 aa6.05□□□□□ -1.44
LSM5-205ENST00000409952 BIRC3Q13489 604 aa6.05□□□□□ -1.44
LSM5-205ENST00000409952 LRRC32Q14392 662 aa6.05□□□□□ -1.44
LSM5-205ENST00000409952 SLC9A5Q14940 896 aa6.05□□□□□ -1.44
LSM5-205ENST00000409952 SRGAP1Q7Z6B7 1085 aa6.05□□□□□ -1.44
LSM5-205ENST00000409952 FIBCD1Q8N539 461 aa6.05□□□□□ -1.44
LSM5-205ENST00000409952 KREMEN2Q8NCW0 462 aa6.05□□□□□ -1.44
LSM5-205ENST00000409952 DIO2Q92813 273 aa6.05□□□□□ -1.44
LSM5-205ENST00000409952 ALPK1Q96QP1 1244 aa6.05□□□□□ -1.44
LSM5-205ENST00000409952 CDC5LQ99459 802 aaKnown RBP6.05□□□□□ -1.44
LSM5-205ENST00000409952 PHF20Q9BVI0 1012 aa6.05□□□□□ -1.44
LSM5-205ENST00000409952 SELENOOQ9BVL4 669 aa6.05□□□□□ -1.44
LSM5-205ENST00000409952 NAA15Q9BXJ9 866 aaKnown RBP6.05□□□□□ -1.44
LSM5-205ENST00000409952 NRBP1Q9UHY1 535 aa6.05□□□□□ -1.44
LSM5-205ENST00000409952 FBXL21Q9UKT6 434 aa6.05□□□□□ -1.44
LSM5-205ENST00000409952 DNM3Q9UQ16 869 aa6.05□□□□□ -1.44
LSM5-205ENST00000409952 INVSQ9Y283 1065 aa6.05□□□□□ -1.44
LSM5-205ENST00000409952 GPR55Q9Y2T6 319 aaPredicted RBP6.05□□□□□ -1.44
LSM5-205ENST00000409952 COQ6Q9Y2Z9 468 aa6.05□□□□□ -1.44
LSM5-205ENST00000409952 A0A0U1RQG5 324 aaPredicted RBP6.04□□□□□ -1.44
LSM5-205ENST00000409952 F5H423 210 aaPredicted RBP6.04□□□□□ -1.44
LSM5-205ENST00000409952 AP1G1O43747 822 aa6.04□□□□□ -1.44
LSM5-205ENST00000409952 OFD1O75665 1012 aa6.04□□□□□ -1.44
LSM5-205ENST00000409952 ZRANB2O95218 330 aaKnown RBP eCLIP6.04□□□□□ -1.44
LSM5-205ENST00000409952 SRGNP10124 158 aa6.04□□□□□ -1.44
LSM5-205ENST00000409952 CASP2P42575 452 aa6.04□□□□□ -1.44
LSM5-205ENST00000409952 ECE1P42892 770 aa6.04□□□□□ -1.44
LSM5-205ENST00000409952 ALDH5A1P51649 535 aaPredicted RBP6.04□□□□□ -1.44
LSM5-205ENST00000409952 CYP4F3Q08477 520 aa6.04□□□□□ -1.44
LSM5-205ENST00000409952 SIM2Q14190 667 aaPredicted RBP6.04□□□□□ -1.44
LSM5-205ENST00000409952 LONRF1Q17RB8 773 aa6.04□□□□□ -1.44
LSM5-205ENST00000409952 L1TD1Q5T7N2 865 aaKnown RBP6.04□□□□□ -1.44
LSM5-205ENST00000409952 FAM9BQ8IZU0 186 aa6.04□□□□□ -1.44
LSM5-205ENST00000409952 EFHBQ8N7U6 833 aa6.04□□□□□ -1.44
LSM5-205ENST00000409952 ACRBPQ8NEB7 543 aa6.04□□□□□ -1.44
LSM5-205ENST00000409952 HDAC8Q9BY41 377 aa6.04□□□□□ -1.44
LSM5-205ENST00000409952 RNF38Q9H0F5 515 aa6.04□□□□□ -1.44
LSM5-205ENST00000409952 FAM204AQ9H8W3 233 aa6.04□□□□□ -1.44
LSM5-205ENST00000409952 SP110Q9HB58 689 aa6.04□□□□□ -1.44
LSM5-205ENST00000409952 PRR13Q9NZ81 148 aa6.04□□□□□ -1.44
LSM5-205ENST00000409952 SF3B6Q9Y3B4 125 aaKnown RBP6.04□□□□□ -1.44
LSM5-205ENST00000409952 RNF114Q9Y508 228 aa6.04□□□□□ -1.44
LSM5-205ENST00000409952 PTPDC1A2A3K4 754 aa6.03□□□□□ -1.44
LSM5-205ENST00000409952 PRRT4C9JH25 899 aa6.03□□□□□ -1.44
LSM5-205ENST00000409952 TPP1O14773 563 aa6.03□□□□□ -1.44
LSM5-205ENST00000409952 ZBED1O96006 694 aa6.03□□□□□ -1.44
LSM5-205ENST00000409952 HRGP04196 525 aa6.03□□□□□ -1.44
LSM5-205ENST00000409952 SLC5A1P13866 664 aa6.03□□□□□ -1.44
LSM5-205ENST00000409952 ZKSCAN1P17029 563 aaPredicted RBP6.03□□□□□ -1.44
LSM5-205ENST00000409952 PAK1Q13153 545 aa6.03□□□□□ -1.44
LSM5-205ENST00000409952 BROXQ5VW32 411 aa6.03□□□□□ -1.44
LSM5-205ENST00000409952 MMS22LQ6ZRQ5 1243 aa6.03□□□□□ -1.44
LSM5-205ENST00000409952 PPIL6Q8IXY8 311 aa6.03□□□□□ -1.44
LSM5-205ENST00000409952 NKAPQ8N5F7 415 aaKnown RBP6.03□□□□□ -1.44
LSM5-205ENST00000409952 GPATCH11Q8N954 259 aa6.03□□□□□ -1.44
LSM5-205ENST00000409952 DAGLBQ8NCG7 672 aa6.03□□□□□ -1.44
LSM5-205ENST00000409952 PCDH19Q8TAB3 1148 aa6.03□□□□□ -1.44
LSM5-205ENST00000409952 POF1BQ8WVV4 589 aa6.03□□□□□ -1.44
LSM5-205ENST00000409952 CCDC120Q96HB5 630 aa6.03□□□□□ -1.44
LSM5-205ENST00000409952 TEKT5Q96M29 485 aa6.03□□□□□ -1.44
LSM5-205ENST00000409952 ZDHHC15Q96MV8 337 aa6.03□□□□□ -1.44
LSM5-205ENST00000409952 FAM193BQ96PV7 902 aaPredicted RBP6.03□□□□□ -1.44
LSM5-205ENST00000409952 ALG1Q9BT22 464 aa6.03□□□□□ -1.44
LSM5-205ENST00000409952 GPR27Q9NS67 375 aa6.03□□□□□ -1.44
LSM5-205ENST00000409952 OXSMQ9NWU1 459 aa6.03□□□□□ -1.44
LSM5-205ENST00000409952 DUSP13Q9UII6 198 aa6.03□□□□□ -1.44
LSM5-205ENST00000409952 DGKBQ9Y6T7 804 aa6.03□□□□□ -1.44
LSM5-205ENST00000409952 A6NNZ2 444 aa6.02□□□□□ -1.45
LSM5-205ENST00000409952 ZNF500O60304 480 aaPredicted RBP6.02□□□□□ -1.45
LSM5-205ENST00000409952 LDHCP07864 332 aa6.02□□□□□ -1.45
LSM5-205ENST00000409952 TM4SF4P48230 202 aa6.02□□□□□ -1.45
LSM5-205ENST00000409952 RENBPP51606 427 aa6.02□□□□□ -1.45
LSM5-205ENST00000409952 SCAND1P57086 179 aa6.02□□□□□ -1.45
LSM5-205ENST00000409952 TEKQ02763 1124 aa6.02□□□□□ -1.45
LSM5-205ENST00000409952 SCRN1Q12765 414 aa6.02□□□□□ -1.45
LSM5-205ENST00000409952 NMIQ13287 307 aaPredicted RBP6.02□□□□□ -1.45
LSM5-205ENST00000409952 ACAP2Q15057 778 aa6.02□□□□□ -1.45
LSM5-205ENST00000409952 TESK1Q15569 626 aa6.02□□□□□ -1.45
LSM5-205ENST00000409952 CLUL1Q15846 466 aa6.02□□□□□ -1.45
LSM5-205ENST00000409952 FAM47CQ5HY64 1035 aa6.02□□□□□ -1.45
LSM5-205ENST00000409952 CREB3L3Q68CJ9 461 aa6.02□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms