RNA–Protein interactions for RNA: ENST00000409101.7

SCN3A-203, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SCN3A, Length 6,599 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-203ENST00000409101 C17orf102A2RUQ5 167 aa5.45□□□□□ -1.54
SCN3A-203ENST00000409101 CEP104O60308 925 aa5.45□□□□□ -1.54
SCN3A-203ENST00000409101 P4HBP07237 508 aaKnown RBP5.45□□□□□ -1.54
SCN3A-203ENST00000409101 IVLP07476 585 aa5.45□□□□□ -1.54
SCN3A-203ENST00000409101 ARL4AP40617 200 aa5.45□□□□□ -1.54
SCN3A-203ENST00000409101 EPHB1P54762 984 aa5.45□□□□□ -1.54
SCN3A-203ENST00000409101 MAP1SQ66K74 1059 aaPredicted RBP5.45□□□□□ -1.54
SCN3A-203ENST00000409101 PADI6Q6TGC4 694 aa5.45□□□□□ -1.54
SCN3A-203ENST00000409101 GADD45GIP1Q8TAE8 222 aaPredicted RBP5.45□□□□□ -1.54
SCN3A-203ENST00000409101 MRPL4Q9BYD3 311 aaKnown RBP5.45□□□□□ -1.54
SCN3A-203ENST00000409101 ESPNB1AK53 854 aa5.45□□□□□ -1.54
SCN3A-203ENST00000409101 PPP6R2O75170 966 aa5.45□□□□□ -1.54
SCN3A-203ENST00000409101 TADA2AO75478 443 aa5.45□□□□□ -1.54
SCN3A-203ENST00000409101 MCM6Q14566 821 aa5.45□□□□□ -1.54
SCN3A-203ENST00000409101 RPS6KA1Q15418 735 aa5.45□□□□□ -1.54
SCN3A-203ENST00000409101 ZNF667Q5HYK9 610 aa5.45□□□□□ -1.54
SCN3A-203ENST00000409101 USP17L6PQ6QN14 398 aa5.45□□□□□ -1.54
SCN3A-203ENST00000409101 TMTC1Q8IUR5 882 aa5.45□□□□□ -1.54
SCN3A-203ENST00000409101 TBC1D10CQ8IV04 446 aa5.45□□□□□ -1.54
SCN3A-203ENST00000409101 TRIML1Q8N9V2 468 aa5.45□□□□□ -1.54
SCN3A-203ENST00000409101 SMC6Q96SB8 1091 aa5.45□□□□□ -1.54
SCN3A-203ENST00000409101 EFCC1Q9HA90 598 aa5.45□□□□□ -1.54
SCN3A-203ENST00000409101 FARP1Q9Y4F1 1045 aaPredicted RBP5.45□□□□□ -1.54
SCN3A-203ENST00000409101 GOLGA8IPA6NC78 632 aa5.45□□□□□ -1.54
SCN3A-203ENST00000409101 GOLGA8JA6NMD2 632 aa5.45□□□□□ -1.54
SCN3A-203ENST00000409101 RPS6KA5O75582 802 aa5.45□□□□□ -1.54
SCN3A-203ENST00000409101 STAG3L1P0CL83 205 aa5.45□□□□□ -1.54
SCN3A-203ENST00000409101 HOXA7P31268 230 aaPredicted RBP5.45□□□□□ -1.54
SCN3A-203ENST00000409101 STAT5BP51692 787 aa5.45□□□□□ -1.54
SCN3A-203ENST00000409101 LRRC41Q15345 812 aa5.45□□□□□ -1.54
SCN3A-203ENST00000409101 LONRF2Q1L5Z9 754 aa5.45□□□□□ -1.54
SCN3A-203ENST00000409101 ERCC6LQ2NKX8 1250 aa5.45□□□□□ -1.54
SCN3A-203ENST00000409101 GNASQ5JWF2 1037 aa5.45□□□□□ -1.54
SCN3A-203ENST00000409101 ZKSCAN4Q969J2 545 aaPredicted RBP5.45□□□□□ -1.54
SCN3A-203ENST00000409101 KIAA1586Q9HCI6 787 aa5.45□□□□□ -1.54
SCN3A-203ENST00000409101 RIC8AQ9NPQ8 531 aa5.45□□□□□ -1.54
SCN3A-203ENST00000409101 SPATA31D1Q6ZQQ2 1576 aa5.45□□□□□ -1.54
SCN3A-203ENST00000409101 IFNAR1P17181 557 aa5.45□□□□□ -1.54
SCN3A-203ENST00000409101 QARSP47897 775 aaKnown RBP5.45□□□□□ -1.54
SCN3A-203ENST00000409101 TUBB4BP68371 445 aa5.45□□□□□ -1.54
SCN3A-203ENST00000409101 IRX5P78411 483 aaPredicted RBP5.45□□□□□ -1.54
SCN3A-203ENST00000409101 BFSP2Q13515 415 aa5.45□□□□□ -1.54
SCN3A-203ENST00000409101 PFKFB3Q16875 520 aaPredicted RBP5.45□□□□□ -1.54
SCN3A-203ENST00000409101 LONRF3Q496Y0 759 aa5.45□□□□□ -1.54
SCN3A-203ENST00000409101 RUFY4Q6ZNE9 571 aa5.45□□□□□ -1.54
SCN3A-203ENST00000409101 GDAP1Q8TB36 358 aa5.45□□□□□ -1.54
SCN3A-203ENST00000409101 FAM20AQ96MK3 541 aa5.45□□□□□ -1.54
SCN3A-203ENST00000409101 NYAP2Q9P242 653 aa5.45□□□□□ -1.54
SCN3A-203ENST00000409101 CPA4Q9UI42 421 aa5.45□□□□□ -1.54
SCN3A-203ENST00000409101 H7C0C1 242 aa5.44□□□□□ -1.54
SCN3A-203ENST00000409101 RGL2O15211 777 aa5.44□□□□□ -1.54
SCN3A-203ENST00000409101 GGPS1O95749 300 aa5.44□□□□□ -1.54
SCN3A-203ENST00000409101 ATP5OP48047 213 aa5.44□□□□□ -1.54
SCN3A-203ENST00000409101 PCSK9Q8NBP7 692 aaKnown RBP5.44□□□□□ -1.54
SCN3A-203ENST00000409101 NEDD1Q8NHV4 660 aa5.44□□□□□ -1.54
SCN3A-203ENST00000409101 NAPGQ99747 312 aaPredicted RBP5.44□□□□□ -1.54
SCN3A-203ENST00000409101 SAMD15Q9P1V8 674 aa5.44□□□□□ -1.54
SCN3A-203ENST00000409101 BRPF3Q9ULD4 1205 aa5.44□□□□□ -1.54
SCN3A-203ENST00000409101 TRIM17Q9Y577 477 aa5.44□□□□□ -1.54
SCN3A-203ENST00000409101 MYO3AQ8NEV4 1616 aa5.44□□□□□ -1.54
SCN3A-203ENST00000409101 TLDC2A0PJX2 215 aa5.44□□□□□ -1.54
SCN3A-203ENST00000409101 MAP3K7O43318 606 aa5.44□□□□□ -1.54
SCN3A-203ENST00000409101 ORC4O43929 436 aa5.44□□□□□ -1.54
SCN3A-203ENST00000409101 DTNBO60941 627 aa5.44□□□□□ -1.54
SCN3A-203ENST00000409101 SLC4A1P02730 911 aa5.44□□□□□ -1.54
SCN3A-203ENST00000409101 MYL1P05976 194 aa5.44□□□□□ -1.54
SCN3A-203ENST00000409101 RALAP11233 206 aa5.44□□□□□ -1.54
SCN3A-203ENST00000409101 HDLBPQ00341 1268 aaKnown RBP5.44□□□□□ -1.54
SCN3A-203ENST00000409101 BAATQ14032 418 aaPredicted RBP5.44□□□□□ -1.54
SCN3A-203ENST00000409101 TTBK2Q6IQ55 1244 aa5.44□□□□□ -1.54
SCN3A-203ENST00000409101 CYFIP1Q7L576 1253 aa5.44□□□□□ -1.54
SCN3A-203ENST00000409101 TADA2BQ86TJ2 420 aa5.44□□□□□ -1.54
SCN3A-203ENST00000409101 VPS52Q8N1B4 723 aa5.44□□□□□ -1.54
SCN3A-203ENST00000409101 CCDC110Q8TBZ0 833 aa5.44□□□□□ -1.54
SCN3A-203ENST00000409101 PIGOQ8TEQ8 1089 aa5.44□□□□□ -1.54
SCN3A-203ENST00000409101 OSBPL3Q9H4L5 887 aa5.44□□□□□ -1.54
SCN3A-203ENST00000409101 VCPKMTQ9H867 229 aa5.44□□□□□ -1.54
SCN3A-203ENST00000409101 TRPC7Q9HCX4 862 aa5.44□□□□□ -1.54
SCN3A-203ENST00000409101 NKIRAS1Q9NYS0 192 aa5.44□□□□□ -1.54
SCN3A-203ENST00000409101 SUCLA2Q9P2R7 463 aaPredicted RBP5.44□□□□□ -1.54
SCN3A-203ENST00000409101 HPCAL4Q9UM19 191 aa5.44□□□□□ -1.54
SCN3A-203ENST00000409101 EIF3CLB5ME19 914 aaKnown RBP5.44□□□□□ -1.54
SCN3A-203ENST00000409101 GOLGA8SH3BPF8 625 aa5.44□□□□□ -1.54
SCN3A-203ENST00000409101 PLSCR1O15162 318 aa5.44□□□□□ -1.54
SCN3A-203ENST00000409101 MOCS3O95396 460 aa5.44□□□□□ -1.54
SCN3A-203ENST00000409101 MAN1A1P33908 653 aa5.44□□□□□ -1.54
SCN3A-203ENST00000409101 TNS2Q63HR2 1409 aa5.44□□□□□ -1.54
SCN3A-203ENST00000409101 PNPLA7Q6ZV29 1317 aa5.44□□□□□ -1.54
SCN3A-203ENST00000409101 ARHGAP30Q7Z6I6 1101 aaPredicted RBP5.44□□□□□ -1.54
SCN3A-203ENST00000409101 DHTKD1Q96HY7 919 aaPredicted RBP5.44□□□□□ -1.54
SCN3A-203ENST00000409101 ZNF560Q96MR9 790 aa5.44□□□□□ -1.54
SCN3A-203ENST00000409101 EIF3CQ99613 913 aaKnown RBP5.44□□□□□ -1.54
SCN3A-203ENST00000409101 DDX50Q9BQ39 737 aaKnown RBP5.44□□□□□ -1.54
SCN3A-203ENST00000409101 EMILIN3Q9NT22 766 aa5.44□□□□□ -1.54
SCN3A-203ENST00000409101 NR2E3Q9Y5X4 410 aa5.44□□□□□ -1.54
SCN3A-203ENST00000409101 POTEB3A0JP26 581 aa5.44□□□□□ -1.54
SCN3A-203ENST00000409101 C12orf60Q5U649 245 aa5.44□□□□□ -1.54
SCN3A-203ENST00000409101 CHADLQ6NUI6 762 aa5.44□□□□□ -1.54
SCN3A-203ENST00000409101 POTEBQ6S5H4 581 aa5.44□□□□□ -1.54
SCN3A-203ENST00000409101 USP28Q96RU2 1077 aa5.44□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms