RNA–Protein interactions for RNA: ENST00000409001.5

SSFA2-202, Transcript of Sperm-specific antigen 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SSFA2, Length 4,987 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSFA2-202ENST00000409001 GOLGA8SH3BPF8 625 aa17.07■□□□□ 0.32
SSFA2-202ENST00000409001 CRCPO75575 148 aa17.07■□□□□ 0.32
SSFA2-202ENST00000409001 GLE1Q53GS7 698 aaKnown RBP17.07■□□□□ 0.32
SSFA2-202ENST00000409001 POTEBQ6S5H4 581 aa17.07■□□□□ 0.32
SSFA2-202ENST00000409001 CFAP61Q8NHU2 1237 aa17.07■□□□□ 0.32
SSFA2-202ENST00000409001 DNAJC12Q9UKB3 198 aa17.07■□□□□ 0.32
SSFA2-202ENST00000409001 LMNB2Q03252 620 aa17.07■□□□□ 0.32
SSFA2-202ENST00000409001 COASYQ13057 564 aa17.07■□□□□ 0.32
SSFA2-202ENST00000409001 PROM2Q8N271 834 aa17.07■□□□□ 0.32
SSFA2-202ENST00000409001 PACSIN2Q9UNF0 486 aaPredicted RBP17.07■□□□□ 0.32
SSFA2-202ENST00000409001 KCNJ6P48051 423 aa17.07■□□□□ 0.32
SSFA2-202ENST00000409001 TMED2Q15363 201 aa17.07■□□□□ 0.32
SSFA2-202ENST00000409001 DDX55Q8NHQ9 600 aaKnown RBP eCLIP17.07■□□□□ 0.325e-10■■■■□ 24.1
SSFA2-202ENST00000409001 RAD54LQ92698 747 aa17.07■□□□□ 0.32
SSFA2-202ENST00000409001 CNKSR1Q969H4 720 aa17.07■□□□□ 0.32
SSFA2-202ENST00000409001 CNOT10Q9H9A5 744 aaKnown RBP17.07■□□□□ 0.32
SSFA2-202ENST00000409001 CPSF2Q9P2I0 782 aaKnown RBP17.07■□□□□ 0.32
SSFA2-202ENST00000409001 PTPRMP28827 1452 aa17.06■□□□□ 0.32
SSFA2-202ENST00000409001 EIF3CLB5ME19 914 aaKnown RBP17.06■□□□□ 0.32
SSFA2-202ENST00000409001 ACSL3O95573 720 aa17.06■□□□□ 0.32
SSFA2-202ENST00000409001 SLMAPQ14BN4 828 aa17.06■□□□□ 0.32
SSFA2-202ENST00000409001 PHLDB3Q6NSJ2 640 aa17.06■□□□□ 0.32
SSFA2-202ENST00000409001 ENGASEQ8NFI3 743 aa17.06■□□□□ 0.32
SSFA2-202ENST00000409001 CCT6BQ92526 530 aa17.06■□□□□ 0.32
SSFA2-202ENST00000409001 ANKRD7Q92527 254 aa17.06■□□□□ 0.32
SSFA2-202ENST00000409001 HPS3Q969F9 1004 aa17.06■□□□□ 0.32
SSFA2-202ENST00000409001 FAM84BQ96KN1 310 aaPredicted RBP17.06■□□□□ 0.32
SSFA2-202ENST00000409001 EIF3CQ99613 913 aaKnown RBP17.06■□□□□ 0.32
SSFA2-202ENST00000409001 FAM196BA6NMK8 535 aa17.06■□□□□ 0.32
SSFA2-202ENST00000409001 ZBTB5O15062 677 aa17.06■□□□□ 0.32
SSFA2-202ENST00000409001 TDP2O95551 362 aa17.06■□□□□ 0.32
SSFA2-202ENST00000409001 SARNPP82979 210 aaKnown RBP17.06■□□□□ 0.32
SSFA2-202ENST00000409001 GRM4Q14833 912 aa17.06■□□□□ 0.32
SSFA2-202ENST00000409001 SLC7A3Q8WY07 619 aa17.06■□□□□ 0.32
SSFA2-202ENST00000409001 PNPLA7Q6ZV29 1317 aa17.06■□□□□ 0.32
SSFA2-202ENST00000409001 GCKP35557 465 aa17.06■□□□□ 0.32
SSFA2-202ENST00000409001 NT5C2P49902 561 aa17.06■□□□□ 0.32
SSFA2-202ENST00000409001 ARMC9Q7Z3E5 817 aa17.06■□□□□ 0.32
SSFA2-202ENST00000409001 TC2NQ8N9U0 490 aa17.06■□□□□ 0.32
SSFA2-202ENST00000409001 JPH2Q9BR39 696 aaPredicted RBP17.06■□□□□ 0.32
SSFA2-202ENST00000409001 DDX47Q9H0S4 455 aaKnown RBP17.06■□□□□ 0.32
SSFA2-202ENST00000409001 MYO3AQ8NEV4 1616 aa17.06■□□□□ 0.32
SSFA2-202ENST00000409001 MROH7-TTC4A0A0A0MT08 1334 aa17.06■□□□□ 0.32
SSFA2-202ENST00000409001 INHBAP08476 426 aa17.06■□□□□ 0.32
SSFA2-202ENST00000409001 HOXA7P31268 230 aaPredicted RBP17.06■□□□□ 0.32
SSFA2-202ENST00000409001 DYNLT1P63172 113 aa17.06■□□□□ 0.32
SSFA2-202ENST00000409001 GUF1Q8N442 669 aaKnown RBP17.06■□□□□ 0.32
SSFA2-202ENST00000409001 AS3MTQ9HBK9 375 aa17.06■□□□□ 0.32
SSFA2-202ENST00000409001 HESX1Q9UBX0 185 aa17.06■□□□□ 0.32
SSFA2-202ENST00000409001 A0A1W2PQC6 194 aa17.05■□□□□ 0.32
SSFA2-202ENST00000409001 NOL3O60936 208 aaKnown RBP17.05■□□□□ 0.32
SSFA2-202ENST00000409001 EIF3BP55884 814 aaKnown RBP17.05■□□□□ 0.32
SSFA2-202ENST00000409001 SPZ1Q9BXG8 430 aa17.05■□□□□ 0.32
SSFA2-202ENST00000409001 EFCC1Q9HA90 598 aa17.05■□□□□ 0.32
SSFA2-202ENST00000409001 ADD3Q9UEY8 706 aaKnown RBP17.05■□□□□ 0.32
SSFA2-202ENST00000409001 GMNNO75496 209 aa17.05■□□□□ 0.32
SSFA2-202ENST00000409001 NR3C1P04150 777 aa17.05■□□□□ 0.32
SSFA2-202ENST00000409001 RFX5P48382 616 aaPredicted RBP17.05■□□□□ 0.32
SSFA2-202ENST00000409001 ANKRD40Q6AI12 368 aa17.05■□□□□ 0.32
SSFA2-202ENST00000409001 ARHGEF18Q6ZSZ5 1173 aa17.05■□□□□ 0.32
SSFA2-202ENST00000409001 GDAP1Q8TB36 358 aa17.05■□□□□ 0.32
SSFA2-202ENST00000409001 PPP4R1Q8TF05 950 aa17.05■□□□□ 0.32
SSFA2-202ENST00000409001 MYCBPQ99417 103 aaPredicted RBP17.05■□□□□ 0.32
SSFA2-202ENST00000409001 USP17L10C9JJH3 530 aa17.05■□□□□ 0.32
SSFA2-202ENST00000409001 TAF12Q16514 161 aa17.05■□□□□ 0.32
SSFA2-202ENST00000409001 BRDTQ58F21 947 aaPredicted RBP17.05■□□□□ 0.32
SSFA2-202ENST00000409001 RAD9BQ6WBX8 426 aa17.05■□□□□ 0.32
SSFA2-202ENST00000409001 CCDC125Q86Z20 511 aa17.05■□□□□ 0.32
SSFA2-202ENST00000409001 TRIM11Q96F44 468 aa17.05■□□□□ 0.32
SSFA2-202ENST00000409001 CD209Q9NNX6 404 aa17.05■□□□□ 0.32
SSFA2-202ENST00000409001 CPS1P31327 1500 aa17.05■□□□□ 0.32
SSFA2-202ENST00000409001 COG1Q8WTW3 980 aa17.05■□□□□ 0.32
SSFA2-202ENST00000409001 CAPN11Q9UMQ6 739 aa17.05■□□□□ 0.32
SSFA2-202ENST00000409001 SLC12A2P55011 1212 aa17.04■□□□□ 0.32
SSFA2-202ENST00000409001 TRIM50Q86XT4 487 aa17.04■□□□□ 0.32
SSFA2-202ENST00000409001 SCYL3Q8IZE3 742 aa17.04■□□□□ 0.32
SSFA2-202ENST00000409001 NRBP2Q9NSY0 501 aa17.04■□□□□ 0.32
SSFA2-202ENST00000409001 MAGEA9P43362 315 aa17.04■□□□□ 0.32
SSFA2-202ENST00000409001 MIGA2Q7L4E1 593 aa17.04■□□□□ 0.32
SSFA2-202ENST00000409001 TMC4Q7Z404 712 aa17.04■□□□□ 0.32
SSFA2-202ENST00000409001 PCDHA6Q9UN73 950 aa17.04■□□□□ 0.32
SSFA2-202ENST00000409001 PCDHA8Q9Y5H6 950 aa17.04■□□□□ 0.32
SSFA2-202ENST00000409001 REREQ9P2R6 1566 aa17.04■□□□□ 0.32
SSFA2-202ENST00000409001 POTEFA5A3E0 1075 aa17.04■□□□□ 0.32
SSFA2-202ENST00000409001 GH2P01242 217 aa17.04■□□□□ 0.32
SSFA2-202ENST00000409001 POTEIP0CG38 1075 aa17.04■□□□□ 0.32
SSFA2-202ENST00000409001 PEX19P40855 299 aa17.04■□□□□ 0.32
SSFA2-202ENST00000409001 POTEGQ6S5H5 508 aa17.04■□□□□ 0.32
SSFA2-202ENST00000409001 POTEEQ6S8J3 1075 aa17.04■□□□□ 0.32
SSFA2-202ENST00000409001 TADA2BQ86TJ2 420 aa17.04■□□□□ 0.32
SSFA2-202ENST00000409001 RHOT2Q8IXI1 618 aa17.04■□□□□ 0.32
SSFA2-202ENST00000409001 SPATA4Q8NEY3 305 aa17.04■□□□□ 0.32
SSFA2-202ENST00000409001 HAUS1Q96CS2 278 aa17.04■□□□□ 0.32
SSFA2-202ENST00000409001 EIF2AK2P19525 551 aaKnown RBP17.04■□□□□ 0.32
SSFA2-202ENST00000409001 NR1I3Q14994 352 aa17.04■□□□□ 0.32
SSFA2-202ENST00000409001 NUGGCQ68CJ6 796 aa17.04■□□□□ 0.32
SSFA2-202ENST00000409001 TRIM9Q9C026 710 aa17.04■□□□□ 0.32
SSFA2-202ENST00000409001 LIMA1Q9UHB6 759 aaKnown RBP17.04■□□□□ 0.32
SSFA2-202ENST00000409001 IGBP1P78318 339 aa17.03■□□□□ 0.32
SSFA2-202ENST00000409001 GRIN1Q05586 938 aa17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms