RNA–Protein interactions for RNA: ENST00000406768.1

PSEN1-205, Transcript of presenilin 1, humanhuman

TSL 2 BASIC

Gene PSEN1, Length 4,062 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-205ENST00000406768 NT5C3AQ9H0P0 336 aa9.81□□□□□ -0.84
PSEN1-205ENST00000406768 RXFP1Q9HBX9 757 aa9.81□□□□□ -0.84
PSEN1-205ENST00000406768 TMOD4Q9NZQ9 345 aa9.81□□□□□ -0.84
PSEN1-205ENST00000406768 PACSIN2Q9UNF0 486 aaPredicted RBP9.81□□□□□ -0.84
PSEN1-205ENST00000406768 SLC4A4Q9Y6R1 1079 aa9.81□□□□□ -0.84
PSEN1-205ENST00000406768 RANBP6O60518 1105 aaKnown RBP9.8□□□□□ -0.84
PSEN1-205ENST00000406768 TRPA1O75762 1119 aa9.8□□□□□ -0.84
PSEN1-205ENST00000406768 BRAFP15056 766 aa9.8□□□□□ -0.84
PSEN1-205ENST00000406768 PDE1BQ01064 536 aa9.8□□□□□ -0.84
PSEN1-205ENST00000406768 DR1Q01658 176 aa9.8□□□□□ -0.84
PSEN1-205ENST00000406768 TMEM259Q4ZIN3 620 aa9.8□□□□□ -0.84
PSEN1-205ENST00000406768 DAB2IPQ5VWQ8 1189 aa9.8□□□□□ -0.84
PSEN1-205ENST00000406768 ZNF530Q6P9A1 599 aaPredicted RBP9.8□□□□□ -0.84
PSEN1-205ENST00000406768 C6orf89Q6UWU4 347 aa9.8□□□□□ -0.84
PSEN1-205ENST00000406768 ZNF554Q86TJ5 538 aa9.8□□□□□ -0.84
PSEN1-205ENST00000406768 ELOA2Q8IYF1 753 aaPredicted RBP9.8□□□□□ -0.84
PSEN1-205ENST00000406768 ZNF579Q8NAF0 562 aaKnown RBP9.8□□□□□ -0.84
PSEN1-205ENST00000406768 NUDT16Q96DE0 195 aaKnown RBP9.8□□□□□ -0.84
PSEN1-205ENST00000406768 ABHD8Q96I13 439 aa9.8□□□□□ -0.84
PSEN1-205ENST00000406768 CNNM2Q9H8M5 875 aa9.8□□□□□ -0.84
PSEN1-205ENST00000406768 CYP39A1Q9NYL5 469 aa9.8□□□□□ -0.84
PSEN1-205ENST00000406768 AMACRQ9UHK6 382 aa9.8□□□□□ -0.84
PSEN1-205ENST00000406768 HPSEQ9Y251 543 aa9.8□□□□□ -0.84
PSEN1-205ENST00000406768 CAPN6Q9Y6Q1 641 aa9.8□□□□□ -0.84
PSEN1-205ENST00000406768 TRAF5O00463 557 aa9.8□□□□□ -0.84
PSEN1-205ENST00000406768 ZWINTO95229 277 aa9.8□□□□□ -0.84
PSEN1-205ENST00000406768 PTDSS1P48651 473 aaKnown RBP9.8□□□□□ -0.84
PSEN1-205ENST00000406768 NLRP6P59044 892 aa9.8□□□□□ -0.84
PSEN1-205ENST00000406768 GRAMD1BQ3KR37 738 aa9.8□□□□□ -0.84
PSEN1-205ENST00000406768 TRIM11Q96F44 468 aa9.8□□□□□ -0.84
PSEN1-205ENST00000406768 AGPAT5Q9NUQ2 364 aa9.8□□□□□ -0.84
PSEN1-205ENST00000406768 USP40Q9NVE5 1235 aa9.8□□□□□ -0.84
PSEN1-205ENST00000406768 TBK1Q9UHD2 729 aa9.8□□□□□ -0.84
PSEN1-205ENST00000406768 PCDHB6Q9Y5E3 794 aa9.8□□□□□ -0.84
PSEN1-205ENST00000406768 MINDY4BA8MYZ0 360 aa9.8□□□□□ -0.84
PSEN1-205ENST00000406768 MCF2LO15068 1137 aa9.8□□□□□ -0.84
PSEN1-205ENST00000406768 HNRNPCL1O60812 293 aaKnown RBP9.8□□□□□ -0.84
PSEN1-205ENST00000406768 CCDC166P0CW27 439 aa9.8□□□□□ -0.84
PSEN1-205ENST00000406768 TARSP26639 723 aaKnown RBP9.8□□□□□ -0.84
PSEN1-205ENST00000406768 MAP3K21Q5TCX8 1036 aa9.8□□□□□ -0.84
PSEN1-205ENST00000406768 UBL4BQ8N7F7 174 aa9.8□□□□□ -0.84
PSEN1-205ENST00000406768 ZCRB1Q8TBF4 217 aaKnown RBP9.8□□□□□ -0.84
PSEN1-205ENST00000406768 TBC1D5Q92609 795 aa9.8□□□□□ -0.84
PSEN1-205ENST00000406768 SPZ1Q9BXG8 430 aa9.8□□□□□ -0.84
PSEN1-205ENST00000406768 EIF2AQ9BY44 585 aaKnown RBP9.8□□□□□ -0.84
PSEN1-205ENST00000406768 TMOD2Q9NZR1 351 aa9.8□□□□□ -0.84
PSEN1-205ENST00000406768 SNX24Q9Y343 169 aa9.8□□□□□ -0.84
PSEN1-205ENST00000406768 MREGQ8N565 214 aa9.79□□□□□ -0.84
PSEN1-205ENST00000406768 TRIML2Q8N7C3 387 aa9.79□□□□□ -0.84
PSEN1-205ENST00000406768 SYT2Q8N9I0 419 aaPredicted RBP9.79□□□□□ -0.84
PSEN1-205ENST00000406768 SREK1Q8WXA9 508 aaKnown RBP9.79□□□□□ -0.84
PSEN1-205ENST00000406768 NLRP3Q96P20 1036 aa9.79□□□□□ -0.84
PSEN1-205ENST00000406768 UBA5Q9GZZ9 404 aa9.79□□□□□ -0.84
PSEN1-205ENST00000406768 FOXP1Q9H334 677 aaPredicted RBP9.79□□□□□ -0.84
PSEN1-205ENST00000406768 NDST4Q9H3R1 872 aa9.79□□□□□ -0.84
PSEN1-205ENST00000406768 SLITRK6Q9H5Y7 841 aa9.79□□□□□ -0.84
PSEN1-205ENST00000406768 PALMDQ9NP74 551 aa9.79□□□□□ -0.84
PSEN1-205ENST00000406768 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP9.79□□□□□ -0.843e-6■■■□□ 17.3
PSEN1-205ENST00000406768 P4HA2O15460 535 aa9.79□□□□□ -0.84
PSEN1-205ENST00000406768 STAMBPO95630 424 aa9.79□□□□□ -0.84
PSEN1-205ENST00000406768 NCALDP61601 193 aa9.79□□□□□ -0.84
PSEN1-205ENST00000406768 WASHC2DQ5SRD0 308 aa9.79□□□□□ -0.84
PSEN1-205ENST00000406768 ERMARDQ5T6L9 678 aa9.79□□□□□ -0.84
PSEN1-205ENST00000406768 GALNT17Q6IS24 598 aa9.79□□□□□ -0.84
PSEN1-205ENST00000406768 FAM228AQ86W67 206 aa9.79□□□□□ -0.84
PSEN1-205ENST00000406768 SCG3Q8WXD2 468 aaKnown RBP9.79□□□□□ -0.84
PSEN1-205ENST00000406768 LENG1Q96BZ8 264 aaPredicted RBP9.79□□□□□ -0.84
PSEN1-205ENST00000406768 SUCLG2Q96I99 432 aa9.79□□□□□ -0.84
PSEN1-205ENST00000406768 RAB34Q9BZG1 259 aa9.79□□□□□ -0.84
PSEN1-205ENST00000406768 HAO1Q9UJM8 370 aa9.79□□□□□ -0.84
PSEN1-205ENST00000406768 GDAQ9Y2T3 454 aa9.79□□□□□ -0.84
PSEN1-205ENST00000406768 ARHGEF10O15013 1369 aa9.79□□□□□ -0.84
PSEN1-205ENST00000406768 IQCA1LA6NCM1 817 aa9.79□□□□□ -0.84
PSEN1-205ENST00000406768 TNFRSF8P28908 595 aa9.79□□□□□ -0.84
PSEN1-205ENST00000406768 SERPINB8P50452 374 aa9.79□□□□□ -0.84
PSEN1-205ENST00000406768 MTTPP55157 894 aa9.79□□□□□ -0.84
PSEN1-205ENST00000406768 POLR2FP61218 127 aaKnown RBP9.79□□□□□ -0.84
PSEN1-205ENST00000406768 ESRRGP62508 458 aa9.79□□□□□ -0.84
PSEN1-205ENST00000406768 PHEXP78562 749 aa9.79□□□□□ -0.84
PSEN1-205ENST00000406768 GFPT1Q06210 699 aaPredicted RBP9.79□□□□□ -0.84
PSEN1-205ENST00000406768 ADAM9Q13443 819 aa9.79□□□□□ -0.84
PSEN1-205ENST00000406768 C16orf87Q6PH81 154 aa9.79□□□□□ -0.84
PSEN1-205ENST00000406768 PI16Q6UXB8 463 aa9.79□□□□□ -0.84
PSEN1-205ENST00000406768 WAPLQ7Z5K2 1190 aa9.79□□□□□ -0.84
PSEN1-205ENST00000406768 TMEM110Q86TL2 294 aa9.79□□□□□ -0.84
PSEN1-205ENST00000406768 FOXP4Q8IVH2 680 aaPredicted RBP9.79□□□□□ -0.84
PSEN1-205ENST00000406768 FAM161BQ96MY7 647 aa9.79□□□□□ -0.84
PSEN1-205ENST00000406768 LZTS2Q9BRK4 669 aa9.79□□□□□ -0.84
PSEN1-205ENST00000406768 TBC1D23Q9NUY8 699 aa9.79□□□□□ -0.84
PSEN1-205ENST00000406768 SPATA7Q9P0W8 599 aa9.79□□□□□ -0.84
PSEN1-205ENST00000406768 LZTS1Q9Y250 596 aa9.79□□□□□ -0.84
PSEN1-205ENST00000406768 ZSCAN9O15535 394 aaPredicted RBP9.78□□□□□ -0.84
PSEN1-205ENST00000406768 STK10O94804 968 aaKnown RBP9.78□□□□□ -0.84
PSEN1-205ENST00000406768 HAUS5O94927 633 aa9.78□□□□□ -0.84
PSEN1-205ENST00000406768 H2AFZP0C0S5 128 aa9.78□□□□□ -0.84
PSEN1-205ENST00000406768 FDPSP14324 419 aaKnown RBP9.78□□□□□ -0.84
PSEN1-205ENST00000406768 DCTN2Q13561 401 aaKnown RBP9.78□□□□□ -0.84
PSEN1-205ENST00000406768 CC2D2BQ6DHV5 1058 aa9.78□□□□□ -0.84
PSEN1-205ENST00000406768 RFX8Q6ZV50 586 aa9.78□□□□□ -0.84
PSEN1-205ENST00000406768 H2AFVQ71UI9 128 aa9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms