RNA–Protein interactions for RNA: ENST00000406335.1

RHBDD3-202, Transcript of rhomboid domain containing 3, humanhuman

TSL 2

Gene RHBDD3, Length 755 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3-202ENST00000406335 DLX2Q07687 328 aaPredicted RBP24.18■■□□□ 1.46
RHBDD3-202ENST00000406335 COL19A1Q14993 1142 aa24.18■■□□□ 1.46
RHBDD3-202ENST00000406335 GRIK4Q16099 956 aa24.18■■□□□ 1.46
RHBDD3-202ENST00000406335 CASC1Q6TDU7 716 aa24.18■■□□□ 1.46
RHBDD3-202ENST00000406335 HFE2Q6ZVN8 426 aa24.18■■□□□ 1.46
RHBDD3-202ENST00000406335 CDHR1Q96JP9 859 aa24.18■■□□□ 1.46
RHBDD3-202ENST00000406335 MYL10Q9BUA6 226 aa24.18■■□□□ 1.46
RHBDD3-202ENST00000406335 EHMT1Q9H9B1 1298 aa24.18■■□□□ 1.46
RHBDD3-202ENST00000406335 CDY2AQ9Y6F7 541 aa24.18■■□□□ 1.46
RHBDD3-202ENST00000406335 FRMPD4Q14CM0 1322 aa24.17■■□□□ 1.46
RHBDD3-202ENST00000406335 M0QZ92 97 aa24.17■■□□□ 1.46
RHBDD3-202ENST00000406335 MCM5P33992 734 aa24.17■■□□□ 1.46
RHBDD3-202ENST00000406335 GTF2F1P35269 517 aaKnown RBP eCLIP24.17■■□□□ 1.46
RHBDD3-202ENST00000406335 SMAD4Q13485 552 aaKnown RBP24.17■■□□□ 1.46
RHBDD3-202ENST00000406335 CTC1Q2NKJ3 1217 aa24.17■■□□□ 1.46
RHBDD3-202ENST00000406335 ZNF654Q8IZM8 581 aa24.17■■□□□ 1.46
RHBDD3-202ENST00000406335 PLVAPQ9BX97 442 aa24.17■■□□□ 1.46
RHBDD3-202ENST00000406335 LRRC2Q9BYS8 371 aa24.17■■□□□ 1.46
RHBDD3-202ENST00000406335 SH2B2O14492 632 aaPredicted RBP24.16■■□□□ 1.46
RHBDD3-202ENST00000406335 KIF5BP33176 963 aa24.16■■□□□ 1.46
RHBDD3-202ENST00000406335 IER5Q5VY09 327 aa24.16■■□□□ 1.46
RHBDD3-202ENST00000406335 TSHZ1Q6ZSZ6 1077 aa24.16■■□□□ 1.46
RHBDD3-202ENST00000406335 RNF135Q8IUD6 432 aa24.16■■□□□ 1.46
RHBDD3-202ENST00000406335 CLP1Q92989 425 aaKnown RBP24.16■■□□□ 1.46
RHBDD3-202ENST00000406335 FAM49AQ9H0Q0 323 aaPredicted RBP24.16■■□□□ 1.46
RHBDD3-202ENST00000406335 SMARCAD1Q9H4L7 1026 aa24.16■■□□□ 1.46
RHBDD3-202ENST00000406335 PLAGL2Q9UPG8 496 aa24.16■■□□□ 1.46
RHBDD3-202ENST00000406335 LINC01565O15544 149 aa24.15■■□□□ 1.46
RHBDD3-202ENST00000406335 DGKIO75912 1065 aa24.15■■□□□ 1.46
RHBDD3-202ENST00000406335 MMP1P03956 469 aa24.15■■□□□ 1.46
RHBDD3-202ENST00000406335 MGAT3Q09327 533 aa24.15■■□□□ 1.46
RHBDD3-202ENST00000406335 FBXO47Q5MNV8 452 aa24.15■■□□□ 1.46
RHBDD3-202ENST00000406335 TNPO1Q92973 898 aaKnown RBP24.15■■□□□ 1.46
RHBDD3-202ENST00000406335 GPRASP2Q96D09 838 aa24.15■■□□□ 1.46
RHBDD3-202ENST00000406335 LRFN2Q9ULH4 789 aa24.15■■□□□ 1.46
RHBDD3-202ENST00000406335 ATP9AO75110 1047 aa24.14■■□□□ 1.45
RHBDD3-202ENST00000406335 STAG3L1P0CL83 205 aa24.14■■□□□ 1.45
RHBDD3-202ENST00000406335 CD52P31358 61 aa24.14■■□□□ 1.45
RHBDD3-202ENST00000406335 MRPS6P82932 125 aaKnown RBP24.14■■□□□ 1.45
RHBDD3-202ENST00000406335 PAN2Q504Q3 1202 aaKnown RBP24.14■■□□□ 1.45
RHBDD3-202ENST00000406335 NFXL1Q6ZNB6 911 aa24.14■■□□□ 1.45
RHBDD3-202ENST00000406335 MICAL3Q7RTP6 2002 aa24.14■■□□□ 1.45
RHBDD3-202ENST00000406335 RASEFQ8IZ41 740 aa24.14■■□□□ 1.45
RHBDD3-202ENST00000406335 MICAL1Q8TDZ2 1067 aa24.14■■□□□ 1.45
RHBDD3-202ENST00000406335 ZNF689Q96CS4 500 aaPredicted RBP24.14■■□□□ 1.45
RHBDD3-202ENST00000406335 TMEM87BQ96K49 555 aa24.14■■□□□ 1.45
RHBDD3-202ENST00000406335 MTA3Q9BTC8 594 aa24.14■■□□□ 1.45
RHBDD3-202ENST00000406335 FTHL17Q9BXU8 183 aa24.14■■□□□ 1.45
RHBDD3-202ENST00000406335 AZI2Q9H6S1 392 aa24.14■■□□□ 1.45
RHBDD3-202ENST00000406335 DOCK5Q9H7D0 1870 aa24.14■■□□□ 1.45
RHBDD3-202ENST00000406335 PSTPIP2Q9H939 334 aa24.14■■□□□ 1.45
RHBDD3-202ENST00000406335 RRN3P2A6NIE6 340 aa24.13■■□□□ 1.45
RHBDD3-202ENST00000406335 PIK3CDO00329 1044 aa24.13■■□□□ 1.45
RHBDD3-202ENST00000406335 MEIS2O14770 477 aa24.13■■□□□ 1.45
RHBDD3-202ENST00000406335 PPFIA3O75145 1194 aa24.13■■□□□ 1.45
RHBDD3-202ENST00000406335 TBX10O75333 385 aa24.13■■□□□ 1.45
RHBDD3-202ENST00000406335 RPLP2P05387 115 aaKnown RBP24.13■■□□□ 1.45
RHBDD3-202ENST00000406335 ADAM15Q13444 863 aa24.13■■□□□ 1.45
RHBDD3-202ENST00000406335 MTMR1Q13613 665 aa24.13■■□□□ 1.45
RHBDD3-202ENST00000406335 HERC4Q5GLZ8 1057 aaPredicted RBP24.13■■□□□ 1.45
RHBDD3-202ENST00000406335 SPOUT1Q5T280 376 aaKnown RBP24.13■■□□□ 1.45
RHBDD3-202ENST00000406335 RNF20Q5VTR2 975 aa24.13■■□□□ 1.45
RHBDD3-202ENST00000406335 RBM23Q86U06 439 aaKnown RBP24.13■■□□□ 1.45
RHBDD3-202ENST00000406335 TRPC6Q9Y210 931 aa24.13■■□□□ 1.45
RHBDD3-202ENST00000406335 MRPL42Q9Y6G3 142 aaKnown RBP24.13■■□□□ 1.45
RHBDD3-202ENST00000406335 GSTTP1A0A1W2PQM5 241 aa24.12■■□□□ 1.45
RHBDD3-202ENST00000406335 SPDYE3A6NKU9 549 aa24.12■■□□□ 1.45
RHBDD3-202ENST00000406335 DDAH1O94760 285 aa24.12■■□□□ 1.45
RHBDD3-202ENST00000406335 LINC00271P0C7V0 271 aa24.12■■□□□ 1.45
RHBDD3-202ENST00000406335 RXRAP19793 462 aa24.12■■□□□ 1.45
RHBDD3-202ENST00000406335 GNAQP50148 359 aa24.12■■□□□ 1.45
RHBDD3-202ENST00000406335 TMEM62Q0P6H9 643 aa24.12■■□□□ 1.45
RHBDD3-202ENST00000406335 ADCK5Q3MIX3 580 aa24.12■■□□□ 1.45
RHBDD3-202ENST00000406335 NAALADL2Q58DX5 795 aa24.12■■□□□ 1.45
RHBDD3-202ENST00000406335 RAB11FIP4Q86YS3 637 aa24.12■■□□□ 1.45
RHBDD3-202ENST00000406335 CMTR2Q8IYT2 770 aaKnown RBP24.12■■□□□ 1.45
RHBDD3-202ENST00000406335 P2RX5Q93086 422 aa24.12■■□□□ 1.45
RHBDD3-202ENST00000406335 LZTS2Q9BRK4 669 aa24.12■■□□□ 1.45
RHBDD3-202ENST00000406335 SPZ1Q9BXG8 430 aa24.12■■□□□ 1.45
RHBDD3-202ENST00000406335 COL4A6Q14031 1691 aa24.11■■□□□ 1.45
RHBDD3-202ENST00000406335 CCDC69A6NI79 296 aa24.11■■□□□ 1.45
RHBDD3-202ENST00000406335 KCNA2P16389 499 aa24.11■■□□□ 1.45
RHBDD3-202ENST00000406335 LIFRP42702 1097 aa24.11■■□□□ 1.45
RHBDD3-202ENST00000406335 PAK2Q13177 524 aa24.11■■□□□ 1.45
RHBDD3-202ENST00000406335 NPAS4Q8IUM7 802 aa24.11■■□□□ 1.45
RHBDD3-202ENST00000406335 KLHL23Q8NBE8 558 aa24.11■■□□□ 1.45
RHBDD3-202ENST00000406335 POF1BQ8WVV4 589 aa24.11■■□□□ 1.45
RHBDD3-202ENST00000406335 EDAQ92838 391 aa24.11■■□□□ 1.45
RHBDD3-202ENST00000406335 PBXIP1Q96AQ6 731 aa24.11■■□□□ 1.45
RHBDD3-202ENST00000406335 TCEANC2Q96MN5 208 aa24.11■■□□□ 1.45
RHBDD3-202ENST00000406335 NEK1Q96PY6 1258 aa24.11■■□□□ 1.45
RHBDD3-202ENST00000406335 MAP3K14Q99558 947 aa24.11■■□□□ 1.45
RHBDD3-202ENST00000406335 AGO3Q9H9G7 860 aaKnown RBP24.11■■□□□ 1.45
RHBDD3-202ENST00000406335 TRPV2Q9Y5S1 764 aa24.11■■□□□ 1.45
RHBDD3-202ENST00000406335 ITGB1P05556 798 aa24.1■■□□□ 1.45
RHBDD3-202ENST00000406335 INSRRP14616 1297 aa24.1■■□□□ 1.45
RHBDD3-202ENST00000406335 NRIP1P48552 1158 aa24.1■■□□□ 1.45
RHBDD3-202ENST00000406335 MARCH8Q5T0T0 291 aa24.1■■□□□ 1.45
RHBDD3-202ENST00000406335 TMTC2Q8N394 836 aa24.1■■□□□ 1.45
RHBDD3-202ENST00000406335 SPPL3Q8TCT6 385 aa24.1■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms