RNA–Protein interactions for RNA: ENST00000403495.2

HMGB1P17-201, Transcript of high mobility group box 1 pseudogene 17, humanhuman

BASIC

Gene HMGB1P17, Length 628 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P17-201ENST00000403495 PDE6BP35913 854 aa5.24□□□□□ -1.57
HMGB1P17-201ENST00000403495 STAT5AP42229 794 aa5.24□□□□□ -1.57
HMGB1P17-201ENST00000403495 SESN3P58005 492 aa5.24□□□□□ -1.57
HMGB1P17-201ENST00000403495 PAQR3Q6TCH7 311 aa5.24□□□□□ -1.57
HMGB1P17-201ENST00000403495 NLGN4XQ8N0W4 816 aa5.24□□□□□ -1.57
HMGB1P17-201ENST00000403495 SYT3Q9BQG1 590 aa5.24□□□□□ -1.57
HMGB1P17-201ENST00000403495 RTFDC1Q9BY42 306 aaPredicted RBP5.24□□□□□ -1.57
HMGB1P17-201ENST00000403495 KCNH7Q9NS40 1196 aa5.24□□□□□ -1.57
HMGB1P17-201ENST00000403495 TCEAL9Q9UHQ7 104 aa5.24□□□□□ -1.57
HMGB1P17-201ENST00000403495 NOB1Q9ULX3 412 aaKnown RBP5.24□□□□□ -1.57
HMGB1P17-201ENST00000403495 ZNF652Q9Y2D9 606 aa5.24□□□□□ -1.57
HMGB1P17-201ENST00000403495 YBX2Q9Y2T7 364 aaKnown RBP5.24□□□□□ -1.57
HMGB1P17-201ENST00000403495 NOC2LQ9Y3T9 749 aaKnown RBP5.24□□□□□ -1.57
HMGB1P17-201ENST00000403495 KRTAP9-6A0A140TA67 174 aa5.23□□□□□ -1.57
HMGB1P17-201ENST00000403495 GOLGA8AA7E2F4 631 aa5.23□□□□□ -1.57
HMGB1P17-201ENST00000403495 GOLGA8BA8MQT2 603 aa5.23□□□□□ -1.57
HMGB1P17-201ENST00000403495 FOXP2O15409 715 aa5.23□□□□□ -1.57
HMGB1P17-201ENST00000403495 SRGAP3O43295 1099 aa5.23□□□□□ -1.57
HMGB1P17-201ENST00000403495 FBXO21O94952 628 aa5.23□□□□□ -1.57
HMGB1P17-201ENST00000403495 EPHA5P54756 1037 aa5.23□□□□□ -1.57
HMGB1P17-201ENST00000403495 EPHB1P54762 984 aa5.23□□□□□ -1.57
HMGB1P17-201ENST00000403495 ERVFRD-1P60508 538 aa5.23□□□□□ -1.57
HMGB1P17-201ENST00000403495 KLF1Q13351 362 aaPredicted RBP5.23□□□□□ -1.57
HMGB1P17-201ENST00000403495 PPP2R5AQ15172 486 aa5.23□□□□□ -1.57
HMGB1P17-201ENST00000403495 CHRNA2Q15822 529 aa5.23□□□□□ -1.57
HMGB1P17-201ENST00000403495 PLEKHN1Q494U1 663 aaPredicted RBP5.23□□□□□ -1.57
HMGB1P17-201ENST00000403495 PAN2Q504Q3 1202 aaKnown RBP5.23□□□□□ -1.57
HMGB1P17-201ENST00000403495 PGM2L1Q6PCE3 622 aa5.23□□□□□ -1.57
HMGB1P17-201ENST00000403495 PASD1Q8IV76 773 aa5.23□□□□□ -1.57
HMGB1P17-201ENST00000403495 PEX11GQ96HA9 241 aa5.23□□□□□ -1.57
HMGB1P17-201ENST00000403495 INTS4Q96HW7 963 aaKnown RBP5.23□□□□□ -1.57
HMGB1P17-201ENST00000403495 FUBP3Q96I24 572 aaKnown RBP eCLIP5.23□□□□□ -1.57
HMGB1P17-201ENST00000403495 ZNF496Q96IT1 587 aaPredicted RBP5.23□□□□□ -1.57
HMGB1P17-201ENST00000403495 KIRREL1Q96J84 757 aa5.23□□□□□ -1.57
HMGB1P17-201ENST00000403495 ANO3Q9BYT9 981 aa5.23□□□□□ -1.57
HMGB1P17-201ENST00000403495 ZDHHC5Q9C0B5 715 aa5.23□□□□□ -1.57
HMGB1P17-201ENST00000403495 KCNK12Q9HB15 430 aa5.23□□□□□ -1.57
HMGB1P17-201ENST00000403495 ZIM2Q9NZV7 527 aa5.23□□□□□ -1.57
HMGB1P17-201ENST00000403495 KLHL14Q9P2G3 628 aa5.23□□□□□ -1.57
HMGB1P17-201ENST00000403495 EDARQ9UNE0 448 aa5.23□□□□□ -1.57
HMGB1P17-201ENST00000403495 FZD9O00144 591 aa5.22□□□□□ -1.57
HMGB1P17-201ENST00000403495 MAFKO60675 156 aa5.22□□□□□ -1.57
HMGB1P17-201ENST00000403495 LSP1P33241 339 aa5.22□□□□□ -1.57
HMGB1P17-201ENST00000403495 GP2P55259 537 aaKnown RBP5.22□□□□□ -1.57
HMGB1P17-201ENST00000403495 LRP8Q14114 963 aa5.22□□□□□ -1.57
HMGB1P17-201ENST00000403495 ODF1Q14990 250 aa5.22□□□□□ -1.57
HMGB1P17-201ENST00000403495 NFE2Q16621 373 aaPredicted RBP5.22□□□□□ -1.57
HMGB1P17-201ENST00000403495 INAVAQ3KP66 663 aa5.22□□□□□ -1.57
HMGB1P17-201ENST00000403495 PHF19Q5T6S3 580 aa5.22□□□□□ -1.57
HMGB1P17-201ENST00000403495 CYP4F22Q6NT55 531 aa5.22□□□□□ -1.57
HMGB1P17-201ENST00000403495 CC2D1AQ6P1N0 951 aaPredicted RBP5.22□□□□□ -1.57
HMGB1P17-201ENST00000403495 RASSF3Q86WH2 238 aa5.22□□□□□ -1.57
HMGB1P17-201ENST00000403495 FAM26EQ8N5C1 309 aa5.22□□□□□ -1.57
HMGB1P17-201ENST00000403495 ZNF610Q8N9Z0 462 aa5.22□□□□□ -1.57
HMGB1P17-201ENST00000403495 ASB15Q8WXK1 588 aa5.22□□□□□ -1.57
HMGB1P17-201ENST00000403495 CHMP4CQ96CF2 233 aa5.22□□□□□ -1.57
HMGB1P17-201ENST00000403495 GBP4Q96PP9 640 aa5.22□□□□□ -1.57
HMGB1P17-201ENST00000403495 POFUT1Q9H488 388 aa5.22□□□□□ -1.57
HMGB1P17-201ENST00000403495 SLC39A2Q9NP94 309 aa5.22□□□□□ -1.57
HMGB1P17-201ENST00000403495 ACSS2Q9NR19 701 aa5.22□□□□□ -1.57
HMGB1P17-201ENST00000403495 IP6K2Q9UHH9 426 aa5.22□□□□□ -1.57
HMGB1P17-201ENST00000403495 MSRAQ9UJ68 235 aa5.22□□□□□ -1.57
HMGB1P17-201ENST00000403495 NUDT5Q9UKK9 219 aa5.22□□□□□ -1.57
HMGB1P17-201ENST00000403495 OAS3Q9Y6K5 1087 aaKnown RBP5.22□□□□□ -1.57
HMGB1P17-201ENST00000403495 WASHC2AQ641Q2 1341 aa5.22□□□□□ -1.57
HMGB1P17-201ENST00000403495 PRAMEF22A3QJZ6 481 aa5.21□□□□□ -1.58
HMGB1P17-201ENST00000403495 PRPF3O43395 683 aaKnown RBP5.21□□□□□ -1.58
HMGB1P17-201ENST00000403495 TSPAN6O43657 245 aa5.21□□□□□ -1.58
HMGB1P17-201ENST00000403495 PCDHGA12O60330 932 aa5.21□□□□□ -1.58
HMGB1P17-201ENST00000403495 APOL3O95236 402 aa5.21□□□□□ -1.58
HMGB1P17-201ENST00000403495 MPOP05164 745 aa5.21□□□□□ -1.58
HMGB1P17-201ENST00000403495 MC3RP41968 323 aa5.21□□□□□ -1.58
HMGB1P17-201ENST00000403495 AFMP43652 599 aa5.21□□□□□ -1.58
HMGB1P17-201ENST00000403495 PHC1P78364 1004 aa5.21□□□□□ -1.58
HMGB1P17-201ENST00000403495 ZNF200P98182 395 aaPredicted RBP5.21□□□□□ -1.58
HMGB1P17-201ENST00000403495 PIN1Q13526 163 aaPredicted RBP5.21□□□□□ -1.58
HMGB1P17-201ENST00000403495 LRRC32Q14392 662 aa5.21□□□□□ -1.58
HMGB1P17-201ENST00000403495 SNX17Q15036 470 aa5.21□□□□□ -1.58
HMGB1P17-201ENST00000403495 CLUL1Q15846 466 aa5.21□□□□□ -1.58
HMGB1P17-201ENST00000403495 CT83Q5H943 113 aa5.21□□□□□ -1.58
HMGB1P17-201ENST00000403495 PRAMEF18Q5VWM3 479 aa5.21□□□□□ -1.58
HMGB1P17-201ENST00000403495 HIPK4Q8NE63 616 aa5.21□□□□□ -1.58
HMGB1P17-201ENST00000403495 C1orf162Q8NEQ5 155 aaPredicted RBP5.21□□□□□ -1.58
HMGB1P17-201ENST00000403495 FLAD1Q8NFF5 587 aa5.21□□□□□ -1.58
HMGB1P17-201ENST00000403495 PHOSPHO1Q8TCT1 267 aa5.21□□□□□ -1.58
HMGB1P17-201ENST00000403495 ALG3Q92685 438 aa5.21□□□□□ -1.58
HMGB1P17-201ENST00000403495 C16orf92Q96LL3 132 aa5.21□□□□□ -1.58
HMGB1P17-201ENST00000403495 PRDM12Q9H4Q4 367 aa5.21□□□□□ -1.58
HMGB1P17-201ENST00000403495 UCKL1Q9NWZ5 548 aa5.21□□□□□ -1.58
HMGB1P17-201ENST00000403495 WASF3Q9UPY6 502 aa5.21□□□□□ -1.58
HMGB1P17-201ENST00000403495 LUC7L2Q9Y383 392 aaKnown RBP5.21□□□□□ -1.58
HMGB1P17-201ENST00000403495 PCDHGA9Q9Y5G4 932 aaKnown RBP5.21□□□□□ -1.58
HMGB1P17-201ENST00000403495 PCDHGA8Q9Y5G5 932 aa5.21□□□□□ -1.58
HMGB1P17-201ENST00000403495 PCDHGA7Q9Y5G6 932 aa5.21□□□□□ -1.58
HMGB1P17-201ENST00000403495 PCDHGA6Q9Y5G7 932 aa5.21□□□□□ -1.58
HMGB1P17-201ENST00000403495 PCDHGA3Q9Y5H0 932 aa5.21□□□□□ -1.58
HMGB1P17-201ENST00000403495 PCDHGA2Q9Y5H1 932 aa5.21□□□□□ -1.58
HMGB1P17-201ENST00000403495 K7ESF4 209 aa5.2□□□□□ -1.58
HMGB1P17-201ENST00000403495 XPOTO43592 962 aaKnown RBP5.2□□□□□ -1.58
HMGB1P17-201ENST00000403495 LRG1P02750 347 aa5.2□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 129.1 ms