RNA–Protein interactions for RNA: ENST00000399649.5

CACNA1C-219, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 6,529 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-219ENST00000399649 TRPC5Q9UL62 973 aaPredicted RBP13.23□□□□□ -0.29
CACNA1C-219ENST00000399649 IL13P35225 146 aa13.23□□□□□ -0.29
CACNA1C-219ENST00000399649 DR1Q01658 176 aa13.23□□□□□ -0.29
CACNA1C-219ENST00000399649 DDX17Q92841 729 aaKnown RBP13.23□□□□□ -0.29
CACNA1C-219ENST00000399649 CDHR1Q96JP9 859 aa13.23□□□□□ -0.29
CACNA1C-219ENST00000399649 ZMYND12Q9H0C1 365 aa13.23□□□□□ -0.29
CACNA1C-219ENST00000399649 FOXP1Q9H334 677 aaPredicted RBP13.23□□□□□ -0.29
CACNA1C-219ENST00000399649 BTBD18B2RXH4 712 aa13.23□□□□□ -0.29
CACNA1C-219ENST00000399649 STK25O00506 426 aa13.23□□□□□ -0.29
CACNA1C-219ENST00000399649 ADD1P35611 737 aaKnown RBP13.23□□□□□ -0.29
CACNA1C-219ENST00000399649 BLVRAP53004 296 aa13.23□□□□□ -0.29
CACNA1C-219ENST00000399649 CHRNDQ07001 517 aa13.23□□□□□ -0.29
CACNA1C-219ENST00000399649 THEM5Q8N1Q8 247 aa13.23□□□□□ -0.29
CACNA1C-219ENST00000399649 ZBTB38Q8NAP3 1195 aaPredicted RBP13.23□□□□□ -0.29
CACNA1C-219ENST00000399649 MTBPQ96DY7 904 aa13.23□□□□□ -0.29
CACNA1C-219ENST00000399649 TRPV6Q9H1D0 765 aa13.23□□□□□ -0.29
CACNA1C-219ENST00000399649 CREB3O43889 395 aa13.23□□□□□ -0.29
CACNA1C-219ENST00000399649 CD58P19256 250 aa13.23□□□□□ -0.29
CACNA1C-219ENST00000399649 SCARA5Q6ZMJ2 495 aa13.23□□□□□ -0.29
CACNA1C-219ENST00000399649 TEKT4Q8WW24 435 aa13.23□□□□□ -0.29
CACNA1C-219ENST00000399649 GSDMAQ96QA5 445 aa13.23□□□□□ -0.29
CACNA1C-219ENST00000399649 ZSWIM6Q9HCJ5 1215 aa13.23□□□□□ -0.29
CACNA1C-219ENST00000399649 TBX22Q9Y458 520 aa13.23□□□□□ -0.29
CACNA1C-219ENST00000399649 A0A0D9SFI3 127 aa13.23□□□□□ -0.29
CACNA1C-219ENST00000399649 NNTQ13423 1086 aa13.23□□□□□ -0.29
CACNA1C-219ENST00000399649 FSCBQ5H9T9 825 aa13.23□□□□□ -0.29
CACNA1C-219ENST00000399649 KIAA1755Q5JYT7 1200 aa13.23□□□□□ -0.29
CACNA1C-219ENST00000399649 NAF1Q96HR8 494 aaKnown RBP13.23□□□□□ -0.29
CACNA1C-219ENST00000399649 MRPL40Q9NQ50 206 aaKnown RBP13.23□□□□□ -0.29
CACNA1C-219ENST00000399649 SNX5Q9Y5X3 404 aa13.23□□□□□ -0.29
CACNA1C-219ENST00000399649 TRAPPC8Q9Y2L5 1435 aa13.23□□□□□ -0.29
CACNA1C-219ENST00000399649 PHLPP2Q6ZVD8 1323 aa13.23□□□□□ -0.29
CACNA1C-219ENST00000399649 DCTN3O75935 186 aa13.22□□□□□ -0.29
CACNA1C-219ENST00000399649 TRAPPC10P48553 1259 aa13.22□□□□□ -0.29
CACNA1C-219ENST00000399649 C6orf118Q5T5N4 469 aa13.22□□□□□ -0.29
CACNA1C-219ENST00000399649 ACAD11Q709F0 780 aa13.22□□□□□ -0.29
CACNA1C-219ENST00000399649 CCDC17Q96LX7 622 aa13.22□□□□□ -0.29
CACNA1C-219ENST00000399649 TRIM55Q9BYV6 548 aa13.22□□□□□ -0.29
CACNA1C-219ENST00000399649 RNF14Q9UBS8 474 aa13.22□□□□□ -0.29
CACNA1C-219ENST00000399649 FTCDO95954 541 aa13.22□□□□□ -0.29
CACNA1C-219ENST00000399649 PTH1RQ03431 593 aa13.22□□□□□ -0.29
CACNA1C-219ENST00000399649 LRRC41Q15345 812 aa13.22□□□□□ -0.29
CACNA1C-219ENST00000399649 KRT39Q6A163 491 aa13.22□□□□□ -0.29
CACNA1C-219ENST00000399649 VPS39Q96JC1 886 aa13.22□□□□□ -0.29
CACNA1C-219ENST00000399649 ORAI2Q96SN7 254 aa13.22□□□□□ -0.29
CACNA1C-219ENST00000399649 ATP10DQ9P241 1426 aa13.22□□□□□ -0.29
CACNA1C-219ENST00000399649 ZMYND10O75800 440 aa13.22□□□□□ -0.29
CACNA1C-219ENST00000399649 OSTNP61366 133 aa13.22□□□□□ -0.29
CACNA1C-219ENST00000399649 ADCY2Q08462 1091 aa13.22□□□□□ -0.29
CACNA1C-219ENST00000399649 BBS9Q3SYG4 887 aa13.22□□□□□ -0.29
CACNA1C-219ENST00000399649 MTERF2Q49AM1 385 aa13.22□□□□□ -0.29
CACNA1C-219ENST00000399649 CYTH2Q99418 400 aa13.22□□□□□ -0.29
CACNA1C-219ENST00000399649 CTTNBP2Q8WZ74 1663 aa13.22□□□□□ -0.29
CACNA1C-219ENST00000399649 TADA3O75528 432 aa13.22□□□□□ -0.29
CACNA1C-219ENST00000399649 EIF3BP55884 814 aaKnown RBP13.22□□□□□ -0.29
CACNA1C-219ENST00000399649 SPICE1Q8N0Z3 855 aa13.22□□□□□ -0.29
CACNA1C-219ENST00000399649 CNKSR1Q969H4 720 aa13.22□□□□□ -0.29
CACNA1C-219ENST00000399649 PPP1R16BQ96T49 567 aa13.22□□□□□ -0.29
CACNA1C-219ENST00000399649 EPAS1Q99814 870 aa13.22□□□□□ -0.29
CACNA1C-219ENST00000399649 KLC2Q9H0B6 622 aa13.22□□□□□ -0.29
CACNA1C-219ENST00000399649 PCDHA13Q9Y5I0 950 aa13.22□□□□□ -0.29
CACNA1C-219ENST00000399649 GCFC2P16383 781 aaKnown RBP13.22□□□□□ -0.29
CACNA1C-219ENST00000399649 NOVA2Q9UNW9 492 aaKnown RBP13.22□□□□□ -0.29
CACNA1C-219ENST00000399649 hCG_1984214I3L0E3 225 aa13.22□□□□□ -0.29
CACNA1C-219ENST00000399649 SEMA3EO15041 775 aa13.22□□□□□ -0.29
CACNA1C-219ENST00000399649 PSMA2P25787 234 aa13.22□□□□□ -0.29
CACNA1C-219ENST00000399649 CACNB1Q02641 598 aaPredicted RBP13.22□□□□□ -0.29
CACNA1C-219ENST00000399649 CDO1Q16878 200 aa13.22□□□□□ -0.29
CACNA1C-219ENST00000399649 ALS2CLQ60I27 953 aa13.22□□□□□ -0.29
CACNA1C-219ENST00000399649 ZNF713Q8N859 430 aaPredicted RBP13.22□□□□□ -0.29
CACNA1C-219ENST00000399649 ING2Q9H160 280 aa13.22□□□□□ -0.29
CACNA1C-219ENST00000399649 NHEJ1Q9H9Q4 299 aaPredicted RBP13.22□□□□□ -0.29
CACNA1C-219ENST00000399649 HPCAL4Q9UM19 191 aa13.22□□□□□ -0.29
CACNA1C-219ENST00000399649 RECQLP46063 649 aaPredicted RBP13.21□□□□□ -0.29
CACNA1C-219ENST00000399649 SYT2Q8N9I0 419 aaPredicted RBP13.21□□□□□ -0.29
CACNA1C-219ENST00000399649 ENOX1Q8TC92 643 aaKnown RBP13.21□□□□□ -0.29
CACNA1C-219ENST00000399649 NEK9Q8TD19 979 aa13.21□□□□□ -0.29
CACNA1C-219ENST00000399649 EDC3Q96F86 508 aaKnown RBP13.21□□□□□ -0.29
CACNA1C-219ENST00000399649 DONSONQ9NYP3 566 aa13.21□□□□□ -0.29
CACNA1C-219ENST00000399649 SLAIN2Q9P270 581 aa13.21□□□□□ -0.29
CACNA1C-219ENST00000399649 CXCR5P32302 372 aa13.21□□□□□ -0.29
CACNA1C-219ENST00000399649 MDM2Q00987 491 aaPredicted RBP13.21□□□□□ -0.29
CACNA1C-219ENST00000399649 FASTKD5Q7L8L6 764 aaKnown RBP13.21□□□□□ -0.29
CACNA1C-219ENST00000399649 TMCO5AQ8N6Q1 288 aa13.21□□□□□ -0.29
CACNA1C-219ENST00000399649 TJP3O95049 919 aa13.21□□□□□ -0.29
CACNA1C-219ENST00000399649 STAT2P52630 851 aa13.21□□□□□ -0.29
CACNA1C-219ENST00000399649 SCRN1Q12765 414 aa13.21□□□□□ -0.29
CACNA1C-219ENST00000399649 PATL1Q86TB9 770 aaKnown RBP13.21□□□□□ -0.29
CACNA1C-219ENST00000399649 OR9Q1Q8NGQ5 310 aa13.21□□□□□ -0.29
CACNA1C-219ENST00000399649 DACH2Q96NX9 599 aa13.21□□□□□ -0.29
CACNA1C-219ENST00000399649 THAP9Q9H5L6 903 aa13.21□□□□□ -0.29
CACNA1C-219ENST00000399649 CLRN2A0PK11 232 aa13.21□□□□□ -0.3
CACNA1C-219ENST00000399649 GUCY2CP25092 1073 aa13.21□□□□□ -0.3
CACNA1C-219ENST00000399649 MECOMQ03112 1051 aa13.21□□□□□ -0.3
CACNA1C-219ENST00000399649 MXD4Q14582 209 aaPredicted RBP13.21□□□□□ -0.3
CACNA1C-219ENST00000399649 TEDDM1Q5T9Z0 273 aa13.21□□□□□ -0.3
CACNA1C-219ENST00000399649 SCG3Q8WXD2 468 aaKnown RBP13.21□□□□□ -0.3
CACNA1C-219ENST00000399649 FSD1LQ9BXM9 530 aa13.21□□□□□ -0.3
CACNA1C-219ENST00000399649 TRIM33Q9UPN9 1127 aa13.21□□□□□ -0.3
CACNA1C-219ENST00000399649 BIVM-ERCC5R4GMW8 1640 aa13.21□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms