RNA–Protein interactions for RNA: ENST00000399455.2

USP47-203, Transcript of ubiquitin specific peptidase 47, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene USP47, Length 7,396 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-203ENST00000399455 RAB3IPQ96QF0 476 aaPredicted RBP8.62□□□□□ -1.03
USP47-203ENST00000399455 RBSNQ9H1K0 784 aa8.62□□□□□ -1.03
USP47-203ENST00000399455 MRPL47Q9HD33 250 aaKnown RBP8.62□□□□□ -1.03
USP47-203ENST00000399455 ENTPD7Q9NQZ7 604 aa8.62□□□□□ -1.03
USP47-203ENST00000399455 DNAI1Q9UI46 699 aa8.62□□□□□ -1.03
USP47-203ENST00000399455 TACC3Q9Y6A5 838 aa8.62□□□□□ -1.03
USP47-203ENST00000399455 SMIM23A6NLE4 172 aa8.61□□□□□ -1.03
USP47-203ENST00000399455 H7C0C1 242 aa8.61□□□□□ -1.03
USP47-203ENST00000399455 PLA2G4BP0C869 781 aa8.61□□□□□ -1.03
USP47-203ENST00000399455 PDIA3P30101 505 aaKnown RBP8.61□□□□□ -1.03
USP47-203ENST00000399455 MAN1A1P33908 653 aa8.61□□□□□ -1.03
USP47-203ENST00000399455 ATP5OP48047 213 aa8.61□□□□□ -1.03
USP47-203ENST00000399455 ERO1BQ86YB8 467 aa8.61□□□□□ -1.03
USP47-203ENST00000399455 PGBD1Q96JS3 809 aa8.61□□□□□ -1.03
USP47-203ENST00000399455 TTC25Q96NG3 672 aa8.61□□□□□ -1.03
USP47-203ENST00000399455 NAPGQ99747 312 aaPredicted RBP8.61□□□□□ -1.03
USP47-203ENST00000399455 PUS7LQ9H0K6 701 aaKnown RBP8.61□□□□□ -1.03
USP47-203ENST00000399455 DEFB129Q9H1M3 183 aa8.61□□□□□ -1.03
USP47-203ENST00000399455 SLC39A2Q9NP94 309 aa8.61□□□□□ -1.03
USP47-203ENST00000399455 SYNGAP1Q96PV0 1343 aa8.61□□□□□ -1.03
USP47-203ENST00000399455 ZNF189O75820 626 aaPredicted RBP8.61□□□□□ -1.03
USP47-203ENST00000399455 TBC1D8O95759 1140 aa8.61□□□□□ -1.03
USP47-203ENST00000399455 FAM20AQ96MK3 541 aa8.61□□□□□ -1.03
USP47-203ENST00000399455 JPH1Q9HDC5 661 aaPredicted RBP8.61□□□□□ -1.03
USP47-203ENST00000399455 STAP2Q9UGK3 403 aa8.61□□□□□ -1.03
USP47-203ENST00000399455 RGS12O14924 1447 aa8.61□□□□□ -1.03
USP47-203ENST00000399455 AP3M2P53677 418 aa8.61□□□□□ -1.03
USP47-203ENST00000399455 RAD51Q06609 339 aa8.61□□□□□ -1.03
USP47-203ENST00000399455 KARSQ15046 597 aaKnown RBP8.61□□□□□ -1.03
USP47-203ENST00000399455 RAB42Q8N4Z0 105 aa8.61□□□□□ -1.03
USP47-203ENST00000399455 STKLD1Q8NE28 680 aa8.61□□□□□ -1.03
USP47-203ENST00000399455 FAM50BQ9Y247 325 aa8.61□□□□□ -1.03
USP47-203ENST00000399455 CARNS1A5YM72 827 aa8.61□□□□□ -1.03
USP47-203ENST00000399455 DYNC1LI2O43237 492 aaPredicted RBP8.61□□□□□ -1.03
USP47-203ENST00000399455 PPFIA4O75335 1185 aa8.61□□□□□ -1.03
USP47-203ENST00000399455 CIB2O75838 187 aa8.61□□□□□ -1.03
USP47-203ENST00000399455 PRDX5P30044 214 aa8.61□□□□□ -1.03
USP47-203ENST00000399455 MAGEA1P43355 309 aa8.61□□□□□ -1.03
USP47-203ENST00000399455 PSMC5P62195 406 aa8.61□□□□□ -1.03
USP47-203ENST00000399455 CTTNQ14247 550 aaKnown RBP8.61□□□□□ -1.03
USP47-203ENST00000399455 SPATA2LQ8IUW3 424 aaPredicted RBP8.61□□□□□ -1.03
USP47-203ENST00000399455 IFT20Q8IY31 132 aa8.61□□□□□ -1.03
USP47-203ENST00000399455 SCYL1Q96KG9 808 aa8.61□□□□□ -1.03
USP47-203ENST00000399455 TIPINQ9BVW5 301 aa8.61□□□□□ -1.03
USP47-203ENST00000399455 JAK2O60674 1132 aa8.61□□□□□ -1.03
USP47-203ENST00000399455 RPS6KA5O75582 802 aa8.61□□□□□ -1.03
USP47-203ENST00000399455 HDLBPQ00341 1268 aaKnown RBP8.61□□□□□ -1.03
USP47-203ENST00000399455 GRM4Q14833 912 aa8.61□□□□□ -1.03
USP47-203ENST00000399455 LONRF2Q1L5Z9 754 aa8.61□□□□□ -1.03
USP47-203ENST00000399455 OR6B2Q6IFH4 312 aa8.61□□□□□ -1.03
USP47-203ENST00000399455 APOA5Q6Q788 366 aa8.61□□□□□ -1.03
USP47-203ENST00000399455 SPDYE1Q8NFV5 336 aaPredicted RBP8.61□□□□□ -1.03
USP47-203ENST00000399455 SOCS4Q8WXH5 440 aa8.61□□□□□ -1.03
USP47-203ENST00000399455 POLR3FQ9H1D9 316 aaPredicted RBP8.61□□□□□ -1.03
USP47-203ENST00000399455 TYW1Q9NV66 732 aaKnown RBP8.61□□□□□ -1.03
USP47-203ENST00000399455 IMPACTQ9P2X3 320 aa8.61□□□□□ -1.03
USP47-203ENST00000399455 MSRAQ9UJ68 235 aa8.61□□□□□ -1.03
USP47-203ENST00000399455 CCDC85CA6NKD9 419 aa8.61□□□□□ -1.03
USP47-203ENST00000399455 F5H6K3 240 aa8.61□□□□□ -1.03
USP47-203ENST00000399455 PRPSAP2O60256 369 aa8.61□□□□□ -1.03
USP47-203ENST00000399455 EFNA5P52803 228 aa8.61□□□□□ -1.03
USP47-203ENST00000399455 KLRC3Q07444 240 aa8.61□□□□□ -1.03
USP47-203ENST00000399455 PNOCQ13519 176 aa8.61□□□□□ -1.03
USP47-203ENST00000399455 SWSAP1Q6NVH7 229 aa8.61□□□□□ -1.03
USP47-203ENST00000399455 GPC2Q8N158 579 aa8.61□□□□□ -1.03
USP47-203ENST00000399455 TLR7Q9NYK1 1049 aaKnown RBP8.61□□□□□ -1.03
USP47-203ENST00000399455 KIDINS220Q9ULH0 1771 aa8.6□□□□□ -1.03
USP47-203ENST00000399455 H7C4K7 107 aa8.6□□□□□ -1.03
USP47-203ENST00000399455 MEIS1O00470 390 aa8.6□□□□□ -1.03
USP47-203ENST00000399455 UPP2O95045 317 aa8.6□□□□□ -1.03
USP47-203ENST00000399455 NR2F2P24468 414 aa8.6□□□□□ -1.03
USP47-203ENST00000399455 ADD1P35611 737 aaKnown RBP8.6□□□□□ -1.03
USP47-203ENST00000399455 RASSF7Q02833 373 aa8.6□□□□□ -1.03
USP47-203ENST00000399455 LAMC2Q13753 1193 aa8.6□□□□□ -1.03
USP47-203ENST00000399455 DNAJC24Q6P3W2 148 aa8.6□□□□□ -1.03
USP47-203ENST00000399455 DHTKD1Q96HY7 919 aaPredicted RBP8.6□□□□□ -1.03
USP47-203ENST00000399455 EFCC1Q9HA90 598 aa8.6□□□□□ -1.03
USP47-203ENST00000399455 FAM207AQ9NSI2 230 aaPredicted RBP8.6□□□□□ -1.03
USP47-203ENST00000399455 PIN4Q9Y237 131 aaKnown RBP8.6□□□□□ -1.03
USP47-203ENST00000399455 RFX7Q2KHR2 1363 aa8.6□□□□□ -1.03
USP47-203ENST00000399455 PRRG1O14668 218 aa8.6□□□□□ -1.03
USP47-203ENST00000399455 PPP6R2O75170 966 aa8.6□□□□□ -1.03
USP47-203ENST00000399455 NR1H3Q13133 447 aa8.6□□□□□ -1.03
USP47-203ENST00000399455 C8orf74Q6P047 294 aa8.6□□□□□ -1.03
USP47-203ENST00000399455 DDX53Q86TM3 631 aaKnown RBP8.6□□□□□ -1.03
USP47-203ENST00000399455 PPP4R1Q8TF05 950 aa8.6□□□□□ -1.03
USP47-203ENST00000399455 TRPC7Q9HCX4 862 aa8.6□□□□□ -1.03
USP47-203ENST00000399455 SRPRBQ9Y5M8 271 aaKnown RBP8.6□□□□□ -1.03
USP47-203ENST00000399455 LRG1P02750 347 aa8.6□□□□□ -1.03
USP47-203ENST00000399455 P4HBP07237 508 aaKnown RBP8.6□□□□□ -1.03
USP47-203ENST00000399455 FANCCQ00597 558 aa8.6□□□□□ -1.03
USP47-203ENST00000399455 PTH1RQ03431 593 aa8.6□□□□□ -1.03
USP47-203ENST00000399455 RPS6KA2Q15349 733 aa8.6□□□□□ -1.03
USP47-203ENST00000399455 CCDC6Q16204 474 aa8.6□□□□□ -1.03
USP47-203ENST00000399455 ZNF699Q32M78 642 aa8.6□□□□□ -1.03
USP47-203ENST00000399455 TYW1BQ6NUM6 668 aa8.6□□□□□ -1.03
USP47-203ENST00000399455 BANK1Q8NDB2 785 aa8.6□□□□□ -1.03
USP47-203ENST00000399455 MROH8Q9H579 483 aa8.6□□□□□ -1.03
USP47-203ENST00000399455 GABBR1Q9UBS5 961 aa8.6□□□□□ -1.03
USP47-203ENST00000399455 PTPRUQ92729 1446 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms