RNA–Protein interactions for RNA: ENST00000399292.7

SMIM11A-201, Transcript of small integral membrane protein 11A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMIM11A, Length 850 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11A-201ENST00000399292 PPIGQ13427 754 aaKnown RBP eCLIP13.53□□□□□ -0.24
SMIM11A-201ENST00000399292 DGKDQ16760 1214 aa13.53□□□□□ -0.24
SMIM11A-201ENST00000399292 GNPTABQ3T906 1256 aa13.53□□□□□ -0.24
SMIM11A-201ENST00000399292 FAM47CQ5HY64 1035 aa13.53□□□□□ -0.24
SMIM11A-201ENST00000399292 NFRKBQ6P4R8 1299 aa13.53□□□□□ -0.24
SMIM11A-201ENST00000399292 Q6ZUG5 572 aa13.53□□□□□ -0.24
SMIM11A-201ENST00000399292 IL31RAQ8NI17 732 aa13.53□□□□□ -0.24
SMIM11A-201ENST00000399292 FAM174AQ8TBP5 190 aa13.53□□□□□ -0.24
SMIM11A-201ENST00000399292 PPP1R12CQ9BZL4 782 aa13.53□□□□□ -0.24
SMIM11A-201ENST00000399292 HIPK3Q9H422 1215 aa13.53□□□□□ -0.24
SMIM11A-201ENST00000399292 LIMD1Q9UGP4 676 aa13.53□□□□□ -0.24
SMIM11A-201ENST00000399292 NAP1L2Q9ULW6 460 aaPredicted RBP13.53□□□□□ -0.24
SMIM11A-201ENST00000399292 LRRC37A2A6NM11 1700 aa13.53□□□□□ -0.24
SMIM11A-201ENST00000399292 COL6A3P12111 3177 aa13.53□□□□□ -0.24
SMIM11A-201ENST00000399292 CCDC196A0A1B0GTZ2 297 aa13.52□□□□□ -0.25
SMIM11A-201ENST00000399292 GOLGA8AA7E2F4 631 aa13.52□□□□□ -0.25
SMIM11A-201ENST00000399292 GOLGA8BA8MQT2 603 aa13.52□□□□□ -0.25
SMIM11A-201ENST00000399292 PPFIA4O75335 1185 aa13.52□□□□□ -0.25
SMIM11A-201ENST00000399292 CYP2C18P33260 490 aa13.52□□□□□ -0.25
SMIM11A-201ENST00000399292 RCAN1P53805 252 aa13.52□□□□□ -0.25
SMIM11A-201ENST00000399292 MRPS9P82933 396 aaKnown RBP13.52□□□□□ -0.25
SMIM11A-201ENST00000399292 SP2Q02086 613 aa13.52□□□□□ -0.25
SMIM11A-201ENST00000399292 PTPN11Q06124 597 aaPredicted RBP13.52□□□□□ -0.25
SMIM11A-201ENST00000399292 CELF3Q5SZQ8 465 aaKnown RBP13.52□□□□□ -0.25
SMIM11A-201ENST00000399292 XRRA1Q6P2D8 792 aa13.52□□□□□ -0.25
SMIM11A-201ENST00000399292 HEATR3Q7Z4Q2 680 aa13.52□□□□□ -0.25
SMIM11A-201ENST00000399292 PPTC7Q8NI37 304 aa13.52□□□□□ -0.25
SMIM11A-201ENST00000399292 BRF1Q92994 677 aa13.52□□□□□ -0.25
SMIM11A-201ENST00000399292 MLXIPQ9HAP2 919 aa13.52□□□□□ -0.25
SMIM11A-201ENST00000399292 TRMT13Q9NUP7 481 aaKnown RBP13.52□□□□□ -0.25
SMIM11A-201ENST00000399292 RTEL1Q9NZ71 1219 aa13.52□□□□□ -0.25
SMIM11A-201ENST00000399292 BAZ2BQ9UIF8 2168 aaKnown RBP13.51□□□□□ -0.25
SMIM11A-201ENST00000399292 FRMPD4Q14CM0 1322 aa13.51□□□□□ -0.25
SMIM11A-201ENST00000399292 GGPS1O95749 300 aa13.51□□□□□ -0.25
SMIM11A-201ENST00000399292 CSF2RAP15509 400 aa13.51□□□□□ -0.25
SMIM11A-201ENST00000399292 RPS6KB1P23443 525 aa13.51□□□□□ -0.25
SMIM11A-201ENST00000399292 APOBRQ0VD83 1088 aa13.51□□□□□ -0.25
SMIM11A-201ENST00000399292 LCE2CQ5TA81 110 aa13.51□□□□□ -0.25
SMIM11A-201ENST00000399292 FBXL16Q8N461 479 aa13.51□□□□□ -0.25
SMIM11A-201ENST00000399292 DEFB123Q8N688 67 aa13.51□□□□□ -0.25
SMIM11A-201ENST00000399292 RNPC3Q96LT9 517 aaKnown RBP13.51□□□□□ -0.25
SMIM11A-201ENST00000399292 SPATA33Q96N06 139 aa13.51□□□□□ -0.25
SMIM11A-201ENST00000399292 USP26Q9BXU7 913 aa13.51□□□□□ -0.25
SMIM11A-201ENST00000399292 SPDYE3A6NKU9 549 aa13.5□□□□□ -0.25
SMIM11A-201ENST00000399292 SPATA31C2B4DYI2 1134 aa13.5□□□□□ -0.25
SMIM11A-201ENST00000399292 SORBS3O60504 671 aa13.5□□□□□ -0.25
SMIM11A-201ENST00000399292 CYP2C9P11712 490 aa13.5□□□□□ -0.25
SMIM11A-201ENST00000399292 UBA1P22314 1058 aaKnown RBP13.5□□□□□ -0.25
SMIM11A-201ENST00000399292 CDC27P30260 824 aa13.5□□□□□ -0.25
SMIM11A-201ENST00000399292 ICAM3P32942 547 aa13.5□□□□□ -0.25
SMIM11A-201ENST00000399292 ADD1P35611 737 aaKnown RBP13.5□□□□□ -0.25
SMIM11A-201ENST00000399292 METAP2P50579 478 aaKnown RBP eCLIP13.5□□□□□ -0.25
SMIM11A-201ENST00000399292 CCL23P55773 120 aa13.5□□□□□ -0.25
SMIM11A-201ENST00000399292 NEDD9Q14511 834 aa13.5□□□□□ -0.25
SMIM11A-201ENST00000399292 HSDL1Q3SXM5 330 aa13.5□□□□□ -0.25
SMIM11A-201ENST00000399292 PCNX4Q63HM2 1172 aa13.5□□□□□ -0.25
SMIM11A-201ENST00000399292 C16orf59Q7L2K0 433 aa13.5□□□□□ -0.25
SMIM11A-201ENST00000399292 PPP1R13LQ8WUF5 828 aa13.5□□□□□ -0.25
SMIM11A-201ENST00000399292 KAT2BQ92831 832 aa13.5□□□□□ -0.25
SMIM11A-201ENST00000399292 GPKOWQ92917 476 aaPredicted RBP eCLIP13.5□□□□□ -0.25
SMIM11A-201ENST00000399292 FOXJ1Q92949 421 aa13.5□□□□□ -0.25
SMIM11A-201ENST00000399292 INPP4AQ96PE3 977 aaPredicted RBP13.5□□□□□ -0.25
SMIM11A-201ENST00000399292 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.5□□□□□ -0.25
SMIM11A-201ENST00000399292 NOC4LQ9BVI4 516 aaKnown RBP13.5□□□□□ -0.25
SMIM11A-201ENST00000399292 SLC24A3Q9HC58 644 aa13.5□□□□□ -0.25
SMIM11A-201ENST00000399292 NOD1Q9Y239 953 aa13.5□□□□□ -0.25
SMIM11A-201ENST00000399292 MYH6P13533 1939 aa13.5□□□□□ -0.25
SMIM11A-201ENST00000399292 UMODL1Q5DID0 1318 aa13.49□□□□□ -0.25
SMIM11A-201ENST00000399292 CNTNAP5Q8WYK1 1306 aa13.49□□□□□ -0.25
SMIM11A-201ENST00000399292 FIBPO43427 364 aa13.49□□□□□ -0.25
SMIM11A-201ENST00000399292 ACRP10323 421 aa13.49□□□□□ -0.25
SMIM11A-201ENST00000399292 NAPAP54920 295 aa13.49□□□□□ -0.25
SMIM11A-201ENST00000399292 UBE2SQ16763 222 aa13.49□□□□□ -0.25
SMIM11A-201ENST00000399292 QPCTQ16769 361 aa13.49□□□□□ -0.25
SMIM11A-201ENST00000399292 TMEM240Q5SV17 173 aa13.49□□□□□ -0.25
SMIM11A-201ENST00000399292 WWC2Q6AWC2 1192 aa13.49□□□□□ -0.25
SMIM11A-201ENST00000399292 FAM109BQ6ICB4 259 aaPredicted RBP13.49□□□□□ -0.25
SMIM11A-201ENST00000399292 RUFY3Q7L099 469 aa13.49□□□□□ -0.25
SMIM11A-201ENST00000399292 NLRX1Q86UT6 975 aa13.49□□□□□ -0.25
SMIM11A-201ENST00000399292 TEX2Q8IWB9 1127 aa13.49□□□□□ -0.25
SMIM11A-201ENST00000399292 RPUSD2Q8IZ73 545 aaKnown RBP13.49□□□□□ -0.25
SMIM11A-201ENST00000399292 C7orf31Q8N865 590 aa13.49□□□□□ -0.25
SMIM11A-201ENST00000399292 KATNAL1Q9BW62 490 aa13.49□□□□□ -0.25
SMIM11A-201ENST00000399292 EHMT1Q9H9B1 1298 aa13.49□□□□□ -0.25
SMIM11A-201ENST00000399292 IL23AQ9NPF7 189 aa13.49□□□□□ -0.25
SMIM11A-201ENST00000399292 PCDHA6Q9UN73 950 aa13.49□□□□□ -0.25
SMIM11A-201ENST00000399292 PCDHA8Q9Y5H6 950 aa13.49□□□□□ -0.25
SMIM11A-201ENST00000399292 LTBP2Q14767 1821 aa13.48□□□□□ -0.25
SMIM11A-201ENST00000399292 SMCO2A6NFE2 343 aa13.48□□□□□ -0.25
SMIM11A-201ENST00000399292 hCG_1984214I3L0E3 225 aa13.48□□□□□ -0.25
SMIM11A-201ENST00000399292 NOP56O00567 594 aaKnown RBP13.48□□□□□ -0.25
SMIM11A-201ENST00000399292 LILRB3O75022 631 aa13.48□□□□□ -0.25
SMIM11A-201ENST00000399292 FGBP02675 491 aa13.48□□□□□ -0.25
SMIM11A-201ENST00000399292 SMAD3P84022 425 aaKnown RBP13.48□□□□□ -0.25
SMIM11A-201ENST00000399292 PTGISQ16647 500 aa13.48□□□□□ -0.25
SMIM11A-201ENST00000399292 KIAA0753Q2KHM9 967 aa13.48□□□□□ -0.25
SMIM11A-201ENST00000399292 PSRC1Q6PGN9 363 aaPredicted RBP13.48□□□□□ -0.25
SMIM11A-201ENST00000399292 ZNF365Q70YC5 407 aa13.48□□□□□ -0.25
SMIM11A-201ENST00000399292 Q7L0L9 218 aa13.48□□□□□ -0.25
SMIM11A-201ENST00000399292 CYFIP1Q7L576 1253 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms