RNA–Protein interactions for RNA: ENST00000398631.2

PCDHA12-201, Transcript of protocadherin alpha 12, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA12, Length 5,233 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA12-201ENST00000398631 PPP1R16BQ96T49 567 aa17.53■□□□□ 0.4
PCDHA12-201ENST00000398631 GOLGA8IPA6NC78 632 aa17.53■□□□□ 0.4
PCDHA12-201ENST00000398631 GOLGA8JA6NMD2 632 aa17.53■□□□□ 0.4
PCDHA12-201ENST00000398631 FAM196BA6NMK8 535 aa17.53■□□□□ 0.4
PCDHA12-201ENST00000398631 NFX1Q12986 1120 aaKnown RBP17.53■□□□□ 0.4
PCDHA12-201ENST00000398631 RAB3IPQ96QF0 476 aaPredicted RBP17.53■□□□□ 0.4
PCDHA12-201ENST00000398631 CALN1Q9BXU9 219 aa17.53■□□□□ 0.4
PCDHA12-201ENST00000398631 ECE1P42892 770 aa17.53■□□□□ 0.4
PCDHA12-201ENST00000398631 SNRNP48Q6IEG0 339 aaKnown RBP17.53■□□□□ 0.4
PCDHA12-201ENST00000398631 ZBTB7AO95365 584 aa17.52■□□□□ 0.4
PCDHA12-201ENST00000398631 MAP3K21Q5TCX8 1036 aa17.52■□□□□ 0.4
PCDHA12-201ENST00000398631 PHLDB2Q86SQ0 1253 aa17.52■□□□□ 0.4
PCDHA12-201ENST00000398631 PIGOQ8TEQ8 1089 aa17.52■□□□□ 0.4
PCDHA12-201ENST00000398631 MXD3Q9BW11 206 aa17.52■□□□□ 0.4
PCDHA12-201ENST00000398631 PPP1R12CQ9BZL4 782 aa17.52■□□□□ 0.4
PCDHA12-201ENST00000398631 RAVER2Q9HCJ3 691 aaKnown RBP17.52■□□□□ 0.4
PCDHA12-201ENST00000398631 USP17L15C9J2P7 530 aa17.52■□□□□ 0.4
PCDHA12-201ENST00000398631 USP17L13C9JLJ4 530 aa17.52■□□□□ 0.4
PCDHA12-201ENST00000398631 USP17L11C9JVI0 530 aa17.52■□□□□ 0.4
PCDHA12-201ENST00000398631 USP17L18D6R9N7 530 aa17.52■□□□□ 0.4
PCDHA12-201ENST00000398631 USP17L22D6RA61 530 aa17.52■□□□□ 0.4
PCDHA12-201ENST00000398631 USP17L17D6RBQ6 530 aa17.52■□□□□ 0.4
PCDHA12-201ENST00000398631 USP17L19D6RCP7 530 aa17.52■□□□□ 0.4
PCDHA12-201ENST00000398631 USP17L20D6RJB6 530 aa17.52■□□□□ 0.4
PCDHA12-201ENST00000398631 POC1B-GALNT4F8VUJ3 575 aa17.52■□□□□ 0.4
PCDHA12-201ENST00000398631 ECEL1O95672 775 aa17.52■□□□□ 0.4
PCDHA12-201ENST00000398631 ACTN1P12814 892 aa17.52■□□□□ 0.4
PCDHA12-201ENST00000398631 KRT76Q01546 638 aa17.52■□□□□ 0.4
PCDHA12-201ENST00000398631 USP17L24Q0WX57 530 aa17.52■□□□□ 0.4
PCDHA12-201ENST00000398631 USP17L6PQ6QN14 398 aa17.52■□□□□ 0.4
PCDHA12-201ENST00000398631 CYB5R4Q7L1T6 521 aa17.52■□□□□ 0.4
PCDHA12-201ENST00000398631 ARPP19P56211 112 aa17.52■□□□□ 0.39
PCDHA12-201ENST00000398631 APOBEC3FQ8IUX4 373 aaKnown RBP17.52■□□□□ 0.39
PCDHA12-201ENST00000398631 CPVLQ9H3G5 476 aa17.52■□□□□ 0.39
PCDHA12-201ENST00000398631 RNF146Q9NTX7 359 aa17.52■□□□□ 0.39
PCDHA12-201ENST00000398631 KCNQ2O43526 872 aa17.52■□□□□ 0.39
PCDHA12-201ENST00000398631 BUB1BO60566 1050 aaPredicted RBP17.52■□□□□ 0.39
PCDHA12-201ENST00000398631 HEXIM1O94992 359 aaKnown RBP17.52■□□□□ 0.39
PCDHA12-201ENST00000398631 PRELPP51888 382 aa17.52■□□□□ 0.39
PCDHA12-201ENST00000398631 SPP2Q13103 211 aa17.52■□□□□ 0.39
PCDHA12-201ENST00000398631 NFIXQ14938 502 aa17.52■□□□□ 0.39
PCDHA12-201ENST00000398631 PTPN21Q16825 1174 aa17.52■□□□□ 0.39
PCDHA12-201ENST00000398631 RESP18Q5W5W9 173 aa17.52■□□□□ 0.39
PCDHA12-201ENST00000398631 SP8Q8IXZ3 490 aa17.52■□□□□ 0.39
PCDHA12-201ENST00000398631 THNSL1Q8IYQ7 743 aa17.52■□□□□ 0.39
PCDHA12-201ENST00000398631 SKA2Q8WVK7 121 aaPredicted RBP17.52■□□□□ 0.39
PCDHA12-201ENST00000398631 USP31Q70CQ4 1352 aa17.51■□□□□ 0.39
PCDHA12-201ENST00000398631 ZNF579Q8NAF0 562 aaKnown RBP17.51■□□□□ 0.39
PCDHA12-201ENST00000398631 HEXIM2Q96MH2 286 aaKnown RBP17.51■□□□□ 0.39
PCDHA12-201ENST00000398631 NHEJ1Q9H9Q4 299 aaPredicted RBP17.51■□□□□ 0.39
PCDHA12-201ENST00000398631 ATP6V0A4Q9HBG4 840 aa17.51■□□□□ 0.39
PCDHA12-201ENST00000398631 GJB4Q9NTQ9 266 aa17.51■□□□□ 0.39
PCDHA12-201ENST00000398631 CRB1P82279 1406 aa17.51■□□□□ 0.39
PCDHA12-201ENST00000398631 ABCB11O95342 1321 aa17.51■□□□□ 0.39
PCDHA12-201ENST00000398631 PRPSAP2O60256 369 aa17.51■□□□□ 0.39
PCDHA12-201ENST00000398631 RBBP5Q15291 538 aaKnown RBP17.51■□□□□ 0.39
PCDHA12-201ENST00000398631 PBKQ96KB5 322 aa17.51■□□□□ 0.39
PCDHA12-201ENST00000398631 UBN2Q6ZU65 1347 aa17.51■□□□□ 0.39
PCDHA12-201ENST00000398631 LRRD1A4D1F6 860 aa17.51■□□□□ 0.39
PCDHA12-201ENST00000398631 F5H6K3 240 aa17.51■□□□□ 0.39
PCDHA12-201ENST00000398631 KLRC3Q07444 240 aa17.51■□□□□ 0.39
PCDHA12-201ENST00000398631 TCP11X2Q5H9J9 407 aa17.51■□□□□ 0.39
PCDHA12-201ENST00000398631 DSTYKQ6XUX3 929 aa17.51■□□□□ 0.39
PCDHA12-201ENST00000398631 MB21D2Q8IYB1 491 aaPredicted RBP17.51■□□□□ 0.39
PCDHA12-201ENST00000398631 DNAAF3Q8N9W5 541 aa17.51■□□□□ 0.39
PCDHA12-201ENST00000398631 RNF139Q8WU17 664 aa17.51■□□□□ 0.39
PCDHA12-201ENST00000398631 HINFPQ9BQA5 517 aa17.51■□□□□ 0.39
PCDHA12-201ENST00000398631 POTEMA6NI47 508 aa17.51■□□□□ 0.39
PCDHA12-201ENST00000398631 SFI1A8K8P3 1242 aa17.51■□□□□ 0.39
PCDHA12-201ENST00000398631 NDUFA10O95299 355 aa17.51■□□□□ 0.39
PCDHA12-201ENST00000398631 GRM4Q14833 912 aa17.51■□□□□ 0.39
PCDHA12-201ENST00000398631 ZNF667Q5HYK9 610 aa17.51■□□□□ 0.39
PCDHA12-201ENST00000398631 ACRBPQ8NEB7 543 aa17.51■□□□□ 0.39
PCDHA12-201ENST00000398631 LRRC8CQ8TDW0 803 aa17.51■□□□□ 0.39
PCDHA12-201ENST00000398631 CASQ2O14958 399 aaPredicted RBP17.5■□□□□ 0.39
PCDHA12-201ENST00000398631 ALKBH5Q6P6C2 394 aaKnown RBP17.5■□□□□ 0.39
PCDHA12-201ENST00000398631 SCARA5Q6ZMJ2 495 aa17.5■□□□□ 0.39
PCDHA12-201ENST00000398631 CAPS2Q9BXY5 557 aa17.5■□□□□ 0.39
PCDHA12-201ENST00000398631 CHD1O14646 1710 aa17.5■□□□□ 0.39
PCDHA12-201ENST00000398631 FTCDO95954 541 aa17.5■□□□□ 0.39
PCDHA12-201ENST00000398631 ORC2Q13416 577 aaPredicted RBP17.5■□□□□ 0.39
PCDHA12-201ENST00000398631 KRT31Q15323 416 aa17.5■□□□□ 0.39
PCDHA12-201ENST00000398631 MAPK6Q16659 721 aa17.5■□□□□ 0.39
PCDHA12-201ENST00000398631 NEK9Q8TD19 979 aa17.5■□□□□ 0.39
PCDHA12-201ENST00000398631 FAM84BQ96KN1 310 aaPredicted RBP17.5■□□□□ 0.39
PCDHA12-201ENST00000398631 EFCC1Q9HA90 598 aa17.5■□□□□ 0.39
PCDHA12-201ENST00000398631 KIAA1586Q9HCI6 787 aa17.5■□□□□ 0.39
PCDHA12-201ENST00000398631 GNAT1P11488 350 aa17.5■□□□□ 0.39
PCDHA12-201ENST00000398631 GPSM2P81274 684 aa17.5■□□□□ 0.39
PCDHA12-201ENST00000398631 PRPF38AQ8NAV1 312 aaKnown RBP17.5■□□□□ 0.39
PCDHA12-201ENST00000398631 SPZ1Q9BXG8 430 aa17.5■□□□□ 0.39
PCDHA12-201ENST00000398631 EPB41L5Q9HCM4 733 aa17.5■□□□□ 0.39
PCDHA12-201ENST00000398631 GDAQ9Y2T3 454 aa17.5■□□□□ 0.39
PCDHA12-201ENST00000398631 PHLPP2Q6ZVD8 1323 aa17.5■□□□□ 0.39
PCDHA12-201ENST00000398631 ARHGAP42A6NI28 874 aa17.5■□□□□ 0.39
PCDHA12-201ENST00000398631 GPC4O75487 556 aa17.5■□□□□ 0.39
PCDHA12-201ENST00000398631 ANXA13P27216 316 aa17.5■□□□□ 0.39
PCDHA12-201ENST00000398631 PLTPP55058 493 aa17.5■□□□□ 0.39
PCDHA12-201ENST00000398631 SNX1Q13596 522 aa17.5■□□□□ 0.39
PCDHA12-201ENST00000398631 PANX2Q96RD6 677 aa17.5■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms