RNA–Protein interactions for RNA: ENST00000397728.7

LSS-202, Transcript of lanosterol synthase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSS, Length 4,936 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSS-202ENST00000397728 TUBB4AP04350 444 aa16.8■□□□□ 0.28
LSS-202ENST00000397728 ZNF568Q3ZCX4 644 aa16.8■□□□□ 0.28
LSS-202ENST00000397728 PEX26Q7Z412 305 aa16.8■□□□□ 0.28
LSS-202ENST00000397728 NAP1L3Q99457 506 aaPredicted RBP16.8■□□□□ 0.28
LSS-202ENST00000397728 GAS8O95995 478 aa16.8■□□□□ 0.28
LSS-202ENST00000397728 CCNE1P24864 410 aa16.8■□□□□ 0.28
LSS-202ENST00000397728 PPP1R14CQ8TAE6 165 aa16.8■□□□□ 0.28
LSS-202ENST00000397728 EIF2AK1Q9BQI3 630 aaKnown RBP16.8■□□□□ 0.28
LSS-202ENST00000397728 SYT17Q9BSW7 474 aa16.8■□□□□ 0.28
LSS-202ENST00000397728 PFASO15067 1338 aa16.8■□□□□ 0.28
LSS-202ENST00000397728 CD58P19256 250 aa16.79■□□□□ 0.28
LSS-202ENST00000397728 CASP1P29466 404 aa16.79■□□□□ 0.28
LSS-202ENST00000397728 NSFP46459 744 aaKnown RBP16.79■□□□□ 0.28
LSS-202ENST00000397728 RPS6P62753 249 aaKnown RBP16.79■□□□□ 0.28
LSS-202ENST00000397728 ZNF365Q70YC5 407 aa16.79■□□□□ 0.28
LSS-202ENST00000397728 IQCGQ9H095 443 aaKnown RBP16.79■□□□□ 0.28
LSS-202ENST00000397728 RGL1Q9NZL6 768 aa16.79■□□□□ 0.28
LSS-202ENST00000397728 ANAPC4Q9UJX5 808 aa16.79■□□□□ 0.28
LSS-202ENST00000397728 FAM169AQ9Y6X4 670 aa16.79■□□□□ 0.28
LSS-202ENST00000397728 POLR1AO95602 1720 aaPredicted RBP16.79■□□□□ 0.28
LSS-202ENST00000397728 GNASQ5JWF2 1037 aa16.79■□□□□ 0.28
LSS-202ENST00000397728 MIS12Q9H081 205 aa16.79■□□□□ 0.28
LSS-202ENST00000397728 CPA4Q9UI42 421 aa16.79■□□□□ 0.28
LSS-202ENST00000397728 CEP104O60308 925 aa16.79■□□□□ 0.28
LSS-202ENST00000397728 NOL12Q9UGY1 213 aaKnown RBP eCLIP16.79■□□□□ 0.28
LSS-202ENST00000397728 V9GYY5 206 aaPredicted RBP16.79■□□□□ 0.28
LSS-202ENST00000397728 ARHGEF37A1IGU5 675 aa16.79■□□□□ 0.28
LSS-202ENST00000397728 ELF1P32519 619 aa16.79■□□□□ 0.28
LSS-202ENST00000397728 BPIFB4P59827 614 aa16.79■□□□□ 0.28
LSS-202ENST00000397728 RARBP10826 455 aa16.78■□□□□ 0.28
LSS-202ENST00000397728 SCARA5Q6ZMJ2 495 aa16.78■□□□□ 0.28
LSS-202ENST00000397728 SCFD2Q8WU76 684 aa16.78■□□□□ 0.28
LSS-202ENST00000397728 SEPT1Q8WYJ6 367 aa16.78■□□□□ 0.28
LSS-202ENST00000397728 GDAQ9Y2T3 454 aa16.78■□□□□ 0.28
LSS-202ENST00000397728 STK10O94804 968 aaKnown RBP16.78■□□□□ 0.28
LSS-202ENST00000397728 GH1P01241 217 aa16.78■□□□□ 0.28
LSS-202ENST00000397728 EPHA7Q15375 998 aa16.78■□□□□ 0.28
LSS-202ENST00000397728 A0A1W2PRG0 241 aa16.78■□□□□ 0.28
LSS-202ENST00000397728 MAP2K1Q02750 393 aaPredicted RBP16.78■□□□□ 0.28
LSS-202ENST00000397728 ORC2Q13416 577 aaPredicted RBP16.78■□□□□ 0.28
LSS-202ENST00000397728 CUL4BQ13620 913 aa16.78■□□□□ 0.28
LSS-202ENST00000397728 GCOM2Q9BZD3 368 aaPredicted RBP16.78■□□□□ 0.28
LSS-202ENST00000397728 FAM184BQ9ULE4 1060 aa16.78■□□□□ 0.28
LSS-202ENST00000397728 STAM2O75886 525 aa16.78■□□□□ 0.28
LSS-202ENST00000397728 CTSHP09668 335 aa16.78■□□□□ 0.28
LSS-202ENST00000397728 EEF1GP26641 437 aaKnown RBP16.78■□□□□ 0.28
LSS-202ENST00000397728 SURF1Q15526 300 aa16.78■□□□□ 0.28
LSS-202ENST00000397728 MAN2A1Q16706 1144 aa16.78■□□□□ 0.28
LSS-202ENST00000397728 SND1Q7KZF4 910 aaKnown RBP eCLIP16.78■□□□□ 0.28
LSS-202ENST00000397728 POLR3FQ9H1D9 316 aaPredicted RBP16.78■□□□□ 0.28
LSS-202ENST00000397728 ALDH8A1Q9H2A2 487 aaPredicted RBP16.78■□□□□ 0.28
LSS-202ENST00000397728 FZD1Q9UP38 647 aa16.78■□□□□ 0.28
LSS-202ENST00000397728 FAM205CA6NFA0 338 aa16.77■□□□□ 0.28
LSS-202ENST00000397728 PPFIA1Q13136 1202 aa16.77■□□□□ 0.28
LSS-202ENST00000397728 USP50Q70EL3 339 aaPredicted RBP16.77■□□□□ 0.28
LSS-202ENST00000397728 AK9Q5TCS8 1911 aa16.77■□□□□ 0.28
LSS-202ENST00000397728 THAP12O43422 761 aa16.77■□□□□ 0.28
LSS-202ENST00000397728 KIAA0754O94854 1291 aa16.77■□□□□ 0.28
LSS-202ENST00000397728 RHOXF2BP0C7M4 288 aa16.77■□□□□ 0.28
LSS-202ENST00000397728 PTPROQ16827 1216 aa16.77■□□□□ 0.28
LSS-202ENST00000397728 UNC13DQ70J99 1090 aa16.77■□□□□ 0.28
LSS-202ENST00000397728 RAD54LQ92698 747 aa16.77■□□□□ 0.28
LSS-202ENST00000397728 RHOXF2Q9BQY4 288 aa16.77■□□□□ 0.28
LSS-202ENST00000397728 GPRC5DQ9NZD1 345 aa16.77■□□□□ 0.28
LSS-202ENST00000397728 NAPGQ99747 312 aaPredicted RBP16.77■□□□□ 0.27
LSS-202ENST00000397728 EHD4Q9H223 541 aa16.77■□□□□ 0.27
LSS-202ENST00000397728 MTRF1LQ9UGC7 380 aaKnown RBP16.77■□□□□ 0.27
LSS-202ENST00000397728 KIF28PB7ZC32 967 aa16.77■□□□□ 0.27
LSS-202ENST00000397728 VCAM1P19320 739 aa16.77■□□□□ 0.27
LSS-202ENST00000397728 GCLCP48506 637 aaPredicted RBP16.77■□□□□ 0.27
LSS-202ENST00000397728 RESP18Q5W5W9 173 aa16.77■□□□□ 0.27
LSS-202ENST00000397728 APOBEC3HQ6NTF7 200 aaKnown RBP16.77■□□□□ 0.27
LSS-202ENST00000397728 LDHAP00338 332 aaKnown RBP16.76■□□□□ 0.27
LSS-202ENST00000397728 RPS6KA1Q15418 735 aa16.76■□□□□ 0.27
LSS-202ENST00000397728 CWC15Q9P013 229 aaKnown RBP16.76■□□□□ 0.27
LSS-202ENST00000397728 SALL1Q9NSC2 1324 aa16.76■□□□□ 0.27
LSS-202ENST00000397728 YY1P25490 414 aa16.76■□□□□ 0.27
LSS-202ENST00000397728 BFSP1Q12934 665 aa16.76■□□□□ 0.27
LSS-202ENST00000397728 CCDC14Q49A88 953 aa16.76■□□□□ 0.27
LSS-202ENST00000397728 CCDC51Q96ER9 411 aa16.76■□□□□ 0.27
LSS-202ENST00000397728 CDCA5Q96FF9 252 aa16.76■□□□□ 0.27
LSS-202ENST00000397728 GCNT4Q9P109 453 aa16.76■□□□□ 0.27
LSS-202ENST00000397728 MKRN1Q9UHC7 482 aaKnown RBP16.76■□□□□ 0.27
LSS-202ENST00000397728 H2AFZP0C0S5 128 aa16.76■□□□□ 0.27
LSS-202ENST00000397728 PPP2R5DQ14738 602 aa16.76■□□□□ 0.27
LSS-202ENST00000397728 H2AFVQ71UI9 128 aa16.76■□□□□ 0.27
LSS-202ENST00000397728 SYCE1Q8N0S2 351 aa16.76■□□□□ 0.27
LSS-202ENST00000397728 POLIQ9UNA4 740 aa16.76■□□□□ 0.27
LSS-202ENST00000397728 HSF2BPO75031 334 aa16.75■□□□□ 0.27
LSS-202ENST00000397728 RNF8O76064 485 aa16.75■□□□□ 0.27
LSS-202ENST00000397728 TROAPQ12815 778 aa16.75■□□□□ 0.27
LSS-202ENST00000397728 RNF149Q8NC42 400 aa16.75■□□□□ 0.27
LSS-202ENST00000397728 CCDC26Q8TAB7 109 aa16.75■□□□□ 0.27
LSS-202ENST00000397728 TMX2Q9Y320 296 aa16.75■□□□□ 0.27
LSS-202ENST00000397728 SLU7O95391 586 aaKnown RBP16.75■□□□□ 0.27
LSS-202ENST00000397728 ATP2A2P16615 1042 aaKnown RBP16.75■□□□□ 0.27
LSS-202ENST00000397728 KRT81Q14533 505 aa16.75■□□□□ 0.27
LSS-202ENST00000397728 PPP1R21Q6ZMI0 780 aa16.75■□□□□ 0.27
LSS-202ENST00000397728 TAAR1Q96RJ0 339 aa16.75■□□□□ 0.27
LSS-202ENST00000397728 C2orf40Q9H1Z8 148 aa16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms