RNA–Protein interactions for RNA: ENST00000397709.1

MAP1LC3A-203, Transcript of microtubule associated protein 1 light chain 3 alpha, humanhuman

APPRIS P1 TSL 3 BASIC

Gene MAP1LC3A, Length 698 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3A-203ENST00000397709 P4HBP07237 508 aaKnown RBP21.84■■□□□ 1.09
MAP1LC3A-203ENST00000397709 SPATA31C1P0DKV0 1188 aa21.84■■□□□ 1.09
MAP1LC3A-203ENST00000397709 RPA1P27694 616 aa21.84■■□□□ 1.09
MAP1LC3A-203ENST00000397709 CCT6AP40227 531 aaKnown RBP21.84■■□□□ 1.09
MAP1LC3A-203ENST00000397709 BEX3Q00994 111 aa21.84■■□□□ 1.09
MAP1LC3A-203ENST00000397709 DGKDQ16760 1214 aa21.84■■□□□ 1.09
MAP1LC3A-203ENST00000397709 BRDTQ58F21 947 aaPredicted RBP21.84■■□□□ 1.09
MAP1LC3A-203ENST00000397709 HYIQ5T013 277 aa21.84■■□□□ 1.09
MAP1LC3A-203ENST00000397709 CATSPER3Q86XQ3 398 aa21.84■■□□□ 1.09
MAP1LC3A-203ENST00000397709 BANK1Q8NDB2 785 aa21.84■■□□□ 1.09
MAP1LC3A-203ENST00000397709 AFAP1L1Q8TED9 768 aa21.84■■□□□ 1.09
MAP1LC3A-203ENST00000397709 LMBRD1Q9NUN5 540 aa21.84■■□□□ 1.09
MAP1LC3A-203ENST00000397709 GABBR1Q9UBS5 961 aa21.84■■□□□ 1.09
MAP1LC3A-203ENST00000397709 GOLGA6L4A6NEF3 574 aa21.83■■□□□ 1.09
MAP1LC3A-203ENST00000397709 LGALS2P05162 132 aa21.83■■□□□ 1.09
MAP1LC3A-203ENST00000397709 MUTP22033 750 aa21.83■■□□□ 1.09
MAP1LC3A-203ENST00000397709 TXLNAP40222 546 aa21.83■■□□□ 1.09
MAP1LC3A-203ENST00000397709 QARSP47897 775 aaKnown RBP21.83■■□□□ 1.09
MAP1LC3A-203ENST00000397709 UBE2HP62256 183 aa21.83■■□□□ 1.09
MAP1LC3A-203ENST00000397709 CYP4A11Q02928 519 aa21.83■■□□□ 1.09
MAP1LC3A-203ENST00000397709 ECM1Q16610 540 aa21.83■■□□□ 1.09
MAP1LC3A-203ENST00000397709 UGCGQ16739 394 aa21.83■■□□□ 1.09
MAP1LC3A-203ENST00000397709 CCSAPQ6IQ19 270 aaPredicted RBP21.83■■□□□ 1.09
MAP1LC3A-203ENST00000397709 SWSAP1Q6NVH7 229 aa21.83■■□□□ 1.09
MAP1LC3A-203ENST00000397709 MRPS27Q92552 414 aaKnown RBP21.83■■□□□ 1.09
MAP1LC3A-203ENST00000397709 DEFB118Q96PH6 123 aa21.83■■□□□ 1.09
MAP1LC3A-203ENST00000397709 PNMA5Q96PV4 448 aa21.83■■□□□ 1.09
MAP1LC3A-203ENST00000397709 LXNQ9BS40 222 aa21.83■■□□□ 1.09
MAP1LC3A-203ENST00000397709 ZNF302Q9NR11 478 aa21.83■■□□□ 1.09
MAP1LC3A-203ENST00000397709 FAM13BQ9NYF5 915 aa21.83■■□□□ 1.09
MAP1LC3A-203ENST00000397709 HPSEQ9Y251 543 aa21.83■■□□□ 1.09
MAP1LC3A-203ENST00000397709 MAFBQ9Y5Q3 323 aaPredicted RBP21.83■■□□□ 1.09
MAP1LC3A-203ENST00000397709 KDM3AQ9Y4C1 1321 aa21.82■■□□□ 1.08
MAP1LC3A-203ENST00000397709 POTEB3A0JP26 581 aa21.82■■□□□ 1.08
MAP1LC3A-203ENST00000397709 BACH1O14867 736 aa21.82■■□□□ 1.08
MAP1LC3A-203ENST00000397709 MCM4P33991 863 aa21.82■■□□□ 1.08
MAP1LC3A-203ENST00000397709 PSMC5P62195 406 aa21.82■■□□□ 1.08
MAP1LC3A-203ENST00000397709 GRB10Q13322 594 aa21.82■■□□□ 1.08
MAP1LC3A-203ENST00000397709 CTTNQ14247 550 aaKnown RBP21.82■■□□□ 1.08
MAP1LC3A-203ENST00000397709 KARSQ15046 597 aaKnown RBP21.82■■□□□ 1.08
MAP1LC3A-203ENST00000397709 LRRC41Q15345 812 aa21.82■■□□□ 1.08
MAP1LC3A-203ENST00000397709 TMEM119Q4V9L6 283 aa21.82■■□□□ 1.08
MAP1LC3A-203ENST00000397709 GNASQ5JWF2 1037 aa21.82■■□□□ 1.08
MAP1LC3A-203ENST00000397709 UTP14CQ5TAP6 766 aaKnown RBP21.82■■□□□ 1.08
MAP1LC3A-203ENST00000397709 FAM160B1Q5W0V3 765 aa21.82■■□□□ 1.08
MAP1LC3A-203ENST00000397709 POTEBQ6S5H4 581 aa21.82■■□□□ 1.08
MAP1LC3A-203ENST00000397709 PLPPR4Q7Z2D5 763 aa21.82■■□□□ 1.08
MAP1LC3A-203ENST00000397709 RNF180Q86T96 592 aa21.82■■□□□ 1.08
MAP1LC3A-203ENST00000397709 FSIP1Q8NA03 581 aa21.82■■□□□ 1.08
MAP1LC3A-203ENST00000397709 ATP6V0A1Q93050 837 aa21.82■■□□□ 1.08
MAP1LC3A-203ENST00000397709 C16orf70Q9BSU1 422 aa21.82■■□□□ 1.08
MAP1LC3A-203ENST00000397709 GOLPH3LQ9H4A5 285 aa21.82■■□□□ 1.08
MAP1LC3A-203ENST00000397709 ZSWIM4Q9H7M6 989 aa21.82■■□□□ 1.08
MAP1LC3A-203ENST00000397709 WRAP73Q9P2S5 460 aaPredicted RBP21.82■■□□□ 1.08
MAP1LC3A-203ENST00000397709 MYH9P35579 1960 aaKnown RBP21.81■■□□□ 1.08
MAP1LC3A-203ENST00000397709 A0A1B0GVL5 298 aa21.81■■□□□ 1.08
MAP1LC3A-203ENST00000397709 ZEB2O60315 1214 aa21.81■■□□□ 1.08
MAP1LC3A-203ENST00000397709 KPNA6O60684 536 aa21.81■■□□□ 1.08
MAP1LC3A-203ENST00000397709 LYPLA2O95372 231 aa21.81■■□□□ 1.08
MAP1LC3A-203ENST00000397709 ZNF286BP0CG31 522 aa21.81■■□□□ 1.08
MAP1LC3A-203ENST00000397709 PFKFB1P16118 471 aa21.81■■□□□ 1.08
MAP1LC3A-203ENST00000397709 STAT5BP51692 787 aa21.81■■□□□ 1.08
MAP1LC3A-203ENST00000397709 TRIM50Q86XT4 487 aa21.81■■□□□ 1.08
MAP1LC3A-203ENST00000397709 TPH2Q8IWU9 490 aa21.81■■□□□ 1.08
MAP1LC3A-203ENST00000397709 CALML4Q96GE6 196 aa21.81■■□□□ 1.08
MAP1LC3A-203ENST00000397709 CRISPLD2Q9H0B8 497 aa21.81■■□□□ 1.08
MAP1LC3A-203ENST00000397709 SMARCAD1Q9H4L7 1026 aa21.81■■□□□ 1.08
MAP1LC3A-203ENST00000397709 AZI2Q9H6S1 392 aa21.81■■□□□ 1.08
MAP1LC3A-203ENST00000397709 OGDHLQ9ULD0 1010 aa21.81■■□□□ 1.08
MAP1LC3A-203ENST00000397709 A0A087X0B3 334 aa21.8■■□□□ 1.08
MAP1LC3A-203ENST00000397709 ZNF862O60290 1169 aa21.8■■□□□ 1.08
MAP1LC3A-203ENST00000397709 DKC1O60832 514 aaKnown RBP eCLIP21.8■■□□□ 1.08
MAP1LC3A-203ENST00000397709 GJB1P08034 283 aa21.8■■□□□ 1.08
MAP1LC3A-203ENST00000397709 MYL3P08590 195 aa21.8■■□□□ 1.08
MAP1LC3A-203ENST00000397709 ATP4AP20648 1035 aa21.8■■□□□ 1.08
MAP1LC3A-203ENST00000397709 PURAQ00577 322 aaKnown RBP21.8■■□□□ 1.08
MAP1LC3A-203ENST00000397709 TPRNQ4KMQ1 711 aa21.8■■□□□ 1.08
MAP1LC3A-203ENST00000397709 PDXDC2PQ6P474 469 aa21.8■■□□□ 1.08
MAP1LC3A-203ENST00000397709 POTEGQ6S5H5 508 aa21.8■■□□□ 1.08
MAP1LC3A-203ENST00000397709 C4orf19Q8IY42 314 aa21.8■■□□□ 1.08
MAP1LC3A-203ENST00000397709 GLG1Q92896 1179 aa21.8■■□□□ 1.08
MAP1LC3A-203ENST00000397709 NT5C3AQ9H0P0 336 aa21.8■■□□□ 1.08
MAP1LC3A-203ENST00000397709 CCDC39Q9UFE4 941 aa21.8■■□□□ 1.08
MAP1LC3A-203ENST00000397709 STBD1O95210 358 aa21.79■■□□□ 1.08
MAP1LC3A-203ENST00000397709 F2P00734 622 aa21.79■■□□□ 1.08
MAP1LC3A-203ENST00000397709 PLCG1P19174 1290 aa21.79■■□□□ 1.08
MAP1LC3A-203ENST00000397709 SLC26A2P50443 739 aa21.79■■□□□ 1.08
MAP1LC3A-203ENST00000397709 ZRSR1Q15695 479 aaKnown RBP21.79■■□□□ 1.08
MAP1LC3A-203ENST00000397709 KCNA10Q16322 511 aa21.79■■□□□ 1.08
MAP1LC3A-203ENST00000397709 KCTD17Q8N5Z5 321 aa21.79■■□□□ 1.08
MAP1LC3A-203ENST00000397709 PCSK9Q8NBP7 692 aaKnown RBP21.79■■□□□ 1.08
MAP1LC3A-203ENST00000397709 ARRDC4Q8NCT1 418 aa21.79■■□□□ 1.08
MAP1LC3A-203ENST00000397709 LRRC15Q8TF66 581 aa21.79■■□□□ 1.08
MAP1LC3A-203ENST00000397709 KAT2BQ92831 832 aa21.79■■□□□ 1.08
MAP1LC3A-203ENST00000397709 CDK5RAP3Q96JB5 506 aa21.79■■□□□ 1.08
MAP1LC3A-203ENST00000397709 TSEN34Q9BSV6 310 aaKnown RBP21.79■■□□□ 1.08
MAP1LC3A-203ENST00000397709 DDX19AQ9NUU7 478 aaKnown RBP21.79■■□□□ 1.08
MAP1LC3A-203ENST00000397709 ERAP1Q9NZ08 941 aa21.79■■□□□ 1.08
MAP1LC3A-203ENST00000397709 KCNH3Q9ULD8 1083 aa21.79■■□□□ 1.08
MAP1LC3A-203ENST00000397709 KIAA1024Q9UPX6 916 aa21.79■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms