RNA–Protein interactions for RNA: ENST00000397428.7

SYNE4-203, Transcript of spectrin repeat containing nuclear envelope family member 4, humanhuman

TSL 3

Gene SYNE4, Length 382 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4-203ENST00000397428 MCM5P33992 734 aa13.7□□□□□ -0.22
SYNE4-203ENST00000397428 ZP2Q05996 745 aa13.7□□□□□ -0.22
SYNE4-203ENST00000397428 PPFIA1Q13136 1202 aa13.7□□□□□ -0.22
SYNE4-203ENST00000397428 COL9A3Q14050 684 aaPredicted RBP13.7□□□□□ -0.22
SYNE4-203ENST00000397428 CMTR1Q8N1G2 835 aaKnown RBP13.7□□□□□ -0.22
SYNE4-203ENST00000397428 FANCBQ8NB91 859 aa13.7□□□□□ -0.22
SYNE4-203ENST00000397428 PCYT2Q99447 389 aa13.7□□□□□ -0.22
SYNE4-203ENST00000397428 C11orf84Q9BUA3 381 aaPredicted RBP13.7□□□□□ -0.22
SYNE4-203ENST00000397428 AGO3Q9H9G7 860 aaKnown RBP13.7□□□□□ -0.22
SYNE4-203ENST00000397428 TUBE1Q9UJT0 475 aa13.7□□□□□ -0.22
SYNE4-203ENST00000397428 PCDHA6Q9UN73 950 aa13.7□□□□□ -0.22
SYNE4-203ENST00000397428 FAM50BQ9Y247 325 aa13.7□□□□□ -0.22
SYNE4-203ENST00000397428 RWDD3Q9Y3V2 267 aa13.7□□□□□ -0.22
SYNE4-203ENST00000397428 PCDHA8Q9Y5H6 950 aa13.7□□□□□ -0.22
SYNE4-203ENST00000397428 RRN3P2A6NIE6 340 aa13.69□□□□□ -0.22
SYNE4-203ENST00000397428 SH2B2O14492 632 aaPredicted RBP13.69□□□□□ -0.22
SYNE4-203ENST00000397428 INSRRP14616 1297 aa13.69□□□□□ -0.22
SYNE4-203ENST00000397428 CTNNB1P35222 781 aa13.69□□□□□ -0.22
SYNE4-203ENST00000397428 HYAL1Q12794 435 aa13.69□□□□□ -0.22
SYNE4-203ENST00000397428 MTMR1Q13613 665 aa13.69□□□□□ -0.22
SYNE4-203ENST00000397428 CAMK1Q14012 370 aa13.69□□□□□ -0.22
SYNE4-203ENST00000397428 NECTIN1Q15223 517 aa13.69□□□□□ -0.22
SYNE4-203ENST00000397428 IER5Q5VY09 327 aa13.69□□□□□ -0.22
SYNE4-203ENST00000397428 CASC1Q6TDU7 716 aa13.69□□□□□ -0.22
SYNE4-203ENST00000397428 TSHZ1Q6ZSZ6 1077 aa13.69□□□□□ -0.22
SYNE4-203ENST00000397428 ADHFE1Q8IWW8 467 aa13.69□□□□□ -0.22
SYNE4-203ENST00000397428 GLG1Q92896 1179 aa13.69□□□□□ -0.22
SYNE4-203ENST00000397428 PLVAPQ9BX97 442 aa13.69□□□□□ -0.22
SYNE4-203ENST00000397428 CLDND1Q9NY35 253 aa13.69□□□□□ -0.22
SYNE4-203ENST00000397428 PLAGL2Q9UPG8 496 aa13.69□□□□□ -0.22
SYNE4-203ENST00000397428 CDY2AQ9Y6F7 541 aa13.69□□□□□ -0.22
SYNE4-203ENST00000397428 ADGRA3Q8IWK6 1321 aa13.68□□□□□ -0.22
SYNE4-203ENST00000397428 TTC3P53804 2025 aa13.68□□□□□ -0.22
SYNE4-203ENST00000397428 CCDC69A6NI79 296 aa13.68□□□□□ -0.22
SYNE4-203ENST00000397428 DCXO43602 365 aa13.68□□□□□ -0.22
SYNE4-203ENST00000397428 MARK3P27448 753 aa13.68□□□□□ -0.22
SYNE4-203ENST00000397428 MRPS6P82932 125 aaKnown RBP13.68□□□□□ -0.22
SYNE4-203ENST00000397428 DLX2Q07687 328 aaPredicted RBP13.68□□□□□ -0.22
SYNE4-203ENST00000397428 ADAM15Q13444 863 aa13.68□□□□□ -0.22
SYNE4-203ENST00000397428 BTG3Q14201 252 aaPredicted RBP13.68□□□□□ -0.22
SYNE4-203ENST00000397428 UBE2SQ16763 222 aa13.68□□□□□ -0.22
SYNE4-203ENST00000397428 NAALADL2Q58DX5 795 aa13.68□□□□□ -0.22
SYNE4-203ENST00000397428 NFXL1Q6ZNB6 911 aa13.68□□□□□ -0.22
SYNE4-203ENST00000397428 FAM43BQ6ZT52 329 aaPredicted RBP13.68□□□□□ -0.22
SYNE4-203ENST00000397428 PLPPR4Q7Z2D5 763 aa13.68□□□□□ -0.22
SYNE4-203ENST00000397428 TEX2Q8IWB9 1127 aa13.68□□□□□ -0.22
SYNE4-203ENST00000397428 LINC01599Q8WXQ3 324 aa13.68□□□□□ -0.22
SYNE4-203ENST00000397428 P2RX5Q93086 422 aa13.68□□□□□ -0.22
SYNE4-203ENST00000397428 LSG1Q9H089 658 aaKnown RBP13.68□□□□□ -0.22
SYNE4-203ENST00000397428 KCNH7Q9NS40 1196 aa13.68□□□□□ -0.22
SYNE4-203ENST00000397428 PCDHA2Q9Y5H9 948 aa13.68□□□□□ -0.22
SYNE4-203ENST00000397428 ATG7O95352 703 aa13.67□□□□□ -0.22
SYNE4-203ENST00000397428 SMAD2Q15796 467 aaKnown RBP13.67□□□□□ -0.22
SYNE4-203ENST00000397428 EP400NLQ6ZTU2 488 aa13.67□□□□□ -0.22
SYNE4-203ENST00000397428 SGMS1Q86VZ5 419 aa13.67□□□□□ -0.22
SYNE4-203ENST00000397428 CMTR2Q8IYT2 770 aaKnown RBP13.67□□□□□ -0.22
SYNE4-203ENST00000397428 NME8Q8N427 588 aa13.67□□□□□ -0.22
SYNE4-203ENST00000397428 CYP2W1Q8TAV3 490 aa13.67□□□□□ -0.22
SYNE4-203ENST00000397428 SPPL3Q8TCT6 385 aa13.67□□□□□ -0.22
SYNE4-203ENST00000397428 TNPO1Q92973 898 aaKnown RBP13.67□□□□□ -0.22
SYNE4-203ENST00000397428 ZBTB10Q96DT7 871 aa13.67□□□□□ -0.22
SYNE4-203ENST00000397428 MXRA8Q9BRK3 442 aa13.67□□□□□ -0.22
SYNE4-203ENST00000397428 FTHL17Q9BXU8 183 aa13.67□□□□□ -0.22
SYNE4-203ENST00000397428 CELF4Q9BZC1 486 aaKnown RBP13.67□□□□□ -0.22
SYNE4-203ENST00000397428 UPF3BQ9BZI7 483 aaKnown RBP13.67□□□□□ -0.22
SYNE4-203ENST00000397428 SLC9A2Q9UBY0 812 aa13.67□□□□□ -0.22
SYNE4-203ENST00000397428 SLC12A7Q9Y666 1083 aa13.67□□□□□ -0.22
SYNE4-203ENST00000397428 NFASCO94856 1347 aa13.66□□□□□ -0.22
SYNE4-203ENST00000397428 hCG_1642624A0A1W2PR95 340 aa13.66□□□□□ -0.22
SYNE4-203ENST00000397428 SPDYE3A6NKU9 549 aa13.66□□□□□ -0.22
SYNE4-203ENST00000397428 SLC27A2O14975 620 aa13.66□□□□□ -0.22
SYNE4-203ENST00000397428 MBTPS2O43462 519 aa13.66□□□□□ -0.22
SYNE4-203ENST00000397428 MMP1P03956 469 aa13.66□□□□□ -0.22
SYNE4-203ENST00000397428 RXRAP19793 462 aa13.66□□□□□ -0.22
SYNE4-203ENST00000397428 DNAJB1P25685 340 aa13.66□□□□□ -0.22
SYNE4-203ENST00000397428 CD52P31358 61 aa13.66□□□□□ -0.22
SYNE4-203ENST00000397428 GTF2F1P35269 517 aaKnown RBP eCLIP13.66□□□□□ -0.22
SYNE4-203ENST00000397428 IRS1P35568 1242 aa13.66□□□□□ -0.22
SYNE4-203ENST00000397428 IGBP1P78318 339 aa13.66□□□□□ -0.22
SYNE4-203ENST00000397428 TMTC3Q6ZXV5 915 aa13.66□□□□□ -0.22
SYNE4-203ENST00000397428 CCDC82Q8N4S0 544 aa13.66□□□□□ -0.22
SYNE4-203ENST00000397428 YTHDC1Q96MU7 727 aaKnown RBP13.66□□□□□ -0.22
SYNE4-203ENST00000397428 JPH1Q9HDC5 661 aaPredicted RBP13.66□□□□□ -0.22
SYNE4-203ENST00000397428 ALG13Q9NP73 1137 aaKnown RBP13.66□□□□□ -0.22
SYNE4-203ENST00000397428 PKD2L1Q9P0L9 805 aa13.66□□□□□ -0.22
SYNE4-203ENST00000397428 PADI3Q9ULW8 664 aa13.66□□□□□ -0.22
SYNE4-203ENST00000397428 TRIOO75962 3097 aa13.66□□□□□ -0.22
SYNE4-203ENST00000397428 KDM3AQ9Y4C1 1321 aa13.65□□□□□ -0.22
SYNE4-203ENST00000397428 ATG2AQ2TAZ0 1938 aa13.65□□□□□ -0.22
SYNE4-203ENST00000397428 IGKV6D-21A0A0A0MT36 114 aa13.65□□□□□ -0.22
SYNE4-203ENST00000397428 MEIS1O00470 390 aa13.65□□□□□ -0.22
SYNE4-203ENST00000397428 FOSP01100 380 aaPredicted RBP13.65□□□□□ -0.22
SYNE4-203ENST00000397428 ARP10275 920 aa13.65□□□□□ -0.22
SYNE4-203ENST00000397428 STAT5BP51692 787 aa13.65□□□□□ -0.22
SYNE4-203ENST00000397428 ACTR2P61160 394 aa13.65□□□□□ -0.22
SYNE4-203ENST00000397428 FUT2Q10981 343 aa13.65□□□□□ -0.22
SYNE4-203ENST00000397428 PLCB4Q15147 1175 aa13.65□□□□□ -0.22
SYNE4-203ENST00000397428 CREB3L3Q68CJ9 461 aa13.65□□□□□ -0.22
SYNE4-203ENST00000397428 NPAS4Q8IUM7 802 aa13.65□□□□□ -0.22
SYNE4-203ENST00000397428 FAM49AQ9H0Q0 323 aaPredicted RBP13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms