RNA–Protein interactions for RNA: ENST00000397417.6

IFT140-202, Transcript of intraflagellar transport 140, humanhuman

TSL 5

Gene IFT140, Length 4,023 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT140-202ENST00000397417 ARMC9Q7Z3E5 817 aa12.18□□□□□ -0.46
IFT140-202ENST00000397417 ILDR1Q86SU0 546 aaPredicted RBP12.18□□□□□ -0.46
IFT140-202ENST00000397417 ZBTB8OSQ8IWT0 167 aa12.18□□□□□ -0.46
IFT140-202ENST00000397417 CDAN1Q8IWY9 1227 aa12.18□□□□□ -0.46
IFT140-202ENST00000397417 TMEM143Q96AN5 459 aa12.18□□□□□ -0.46
IFT140-202ENST00000397417 CSDE1O75534 798 aaKnown RBP12.18□□□□□ -0.46
IFT140-202ENST00000397417 ACTN1P12814 892 aa12.18□□□□□ -0.46
IFT140-202ENST00000397417 POTEAQ6S8J7 498 aa12.18□□□□□ -0.46
IFT140-202ENST00000397417 PPP1R21Q6ZMI0 780 aa12.18□□□□□ -0.46
IFT140-202ENST00000397417 NLRP7Q8WX94 980 aa12.18□□□□□ -0.46
IFT140-202ENST00000397417 KIFAP3Q92845 792 aa12.18□□□□□ -0.46
IFT140-202ENST00000397417 FAM213AQ9BRX8 229 aa12.18□□□□□ -0.46
IFT140-202ENST00000397417 PLVAPQ9BX97 442 aa12.18□□□□□ -0.46
IFT140-202ENST00000397417 KCNK9Q9NPC2 374 aa12.18□□□□□ -0.46
IFT140-202ENST00000397417 TRIM10Q9UDY6 481 aa12.18□□□□□ -0.46
IFT140-202ENST00000397417 DKC1O60832 514 aaKnown RBP eCLIP12.18□□□□□ -0.46
IFT140-202ENST00000397417 PIK3CAP42336 1068 aa12.18□□□□□ -0.46
IFT140-202ENST00000397417 SNX1Q13596 522 aa12.18□□□□□ -0.46
IFT140-202ENST00000397417 KCTD19Q17RG1 926 aaPredicted RBP12.18□□□□□ -0.46
IFT140-202ENST00000397417 RAD54LQ92698 747 aa12.18□□□□□ -0.46
IFT140-202ENST00000397417 SPZ1Q9BXG8 430 aa12.18□□□□□ -0.46
IFT140-202ENST00000397417 NHEJ1Q9H9Q4 299 aaPredicted RBP12.18□□□□□ -0.46
IFT140-202ENST00000397417 AGPAT5Q9NUQ2 364 aa12.18□□□□□ -0.46
IFT140-202ENST00000397417 PARP2Q9UGN5 583 aa12.18□□□□□ -0.46
IFT140-202ENST00000397417 A0A1W2PRG0 241 aa12.17□□□□□ -0.46
IFT140-202ENST00000397417 WNT7AO00755 349 aa12.17□□□□□ -0.46
IFT140-202ENST00000397417 ZBTB39O15060 712 aa12.17□□□□□ -0.46
IFT140-202ENST00000397417 BUB1BO60566 1050 aaPredicted RBP12.17□□□□□ -0.46
IFT140-202ENST00000397417 GFPT1Q06210 699 aaPredicted RBP12.17□□□□□ -0.46
IFT140-202ENST00000397417 CFAP58Q5T655 872 aa12.17□□□□□ -0.46
IFT140-202ENST00000397417 MAP1SQ66K74 1059 aaPredicted RBP12.17□□□□□ -0.46
IFT140-202ENST00000397417 CWC15Q9P013 229 aaKnown RBP12.17□□□□□ -0.46
IFT140-202ENST00000397417 HERC5Q9UII4 1024 aaKnown RBP12.17□□□□□ -0.46
IFT140-202ENST00000397417 WDR19Q8NEZ3 1342 aa12.17□□□□□ -0.46
IFT140-202ENST00000397417 NFIBO00712 420 aa12.17□□□□□ -0.46
IFT140-202ENST00000397417 AFPP02771 609 aaKnown RBP12.17□□□□□ -0.46
IFT140-202ENST00000397417 PGK2P07205 417 aa12.17□□□□□ -0.46
IFT140-202ENST00000397417 PSMC2P35998 433 aaKnown RBP12.17□□□□□ -0.46
IFT140-202ENST00000397417 MXI1P50539 228 aa12.17□□□□□ -0.46
IFT140-202ENST00000397417 RPS6P62753 249 aaKnown RBP12.17□□□□□ -0.46
IFT140-202ENST00000397417 KCNH2Q12809 1159 aa12.17□□□□□ -0.46
IFT140-202ENST00000397417 SEL1L2Q5TEA6 688 aa12.17□□□□□ -0.46
IFT140-202ENST00000397417 APOBEC3HQ6NTF7 200 aaKnown RBP12.17□□□□□ -0.46
IFT140-202ENST00000397417 MOB2Q70IA6 237 aa12.17□□□□□ -0.46
IFT140-202ENST00000397417 MB21D1Q8N884 522 aa12.17□□□□□ -0.46
IFT140-202ENST00000397417 FAM151AQ8WW52 585 aa12.17□□□□□ -0.46
IFT140-202ENST00000397417 PLCD4Q9BRC7 762 aa12.17□□□□□ -0.46
IFT140-202ENST00000397417 GOLPH3Q9H4A6 298 aa12.17□□□□□ -0.46
IFT140-202ENST00000397417 VCPKMTQ9H867 229 aa12.17□□□□□ -0.46
IFT140-202ENST00000397417 GPRC5CQ9NQ84 441 aa12.17□□□□□ -0.46
IFT140-202ENST00000397417 NRBP2Q9NSY0 501 aa12.17□□□□□ -0.46
IFT140-202ENST00000397417 SDK1Q7Z5N4 2213 aa12.17□□□□□ -0.46
IFT140-202ENST00000397417 DENND3A2RUS2 1198 aa12.17□□□□□ -0.46
IFT140-202ENST00000397417 LRRC53A6NM62 1247 aa12.17□□□□□ -0.46
IFT140-202ENST00000397417 NDUFA10O95299 355 aa12.17□□□□□ -0.46
IFT140-202ENST00000397417 FXR1P51114 621 aaKnown RBP eCLIP12.17□□□□□ -0.46
IFT140-202ENST00000397417 SOX10P56693 466 aa12.17□□□□□ -0.46
IFT140-202ENST00000397417 PTPAQ15257 358 aa12.17□□□□□ -0.46
IFT140-202ENST00000397417 LONRF2Q1L5Z9 754 aa12.17□□□□□ -0.46
IFT140-202ENST00000397417 RBM43Q6ZSC3 357 aaKnown RBP12.17□□□□□ -0.46
IFT140-202ENST00000397417 UNC13DQ70J99 1090 aa12.17□□□□□ -0.46
IFT140-202ENST00000397417 OTUD6BQ8N6M0 293 aa12.17□□□□□ -0.46
IFT140-202ENST00000397417 CCDC66A2RUB6 948 aa12.16□□□□□ -0.46
IFT140-202ENST00000397417 NCK2O43639 380 aa12.16□□□□□ -0.46
IFT140-202ENST00000397417 CCND2P30279 289 aa12.16□□□□□ -0.46
IFT140-202ENST00000397417 PPP4CP60510 307 aa12.16□□□□□ -0.46
IFT140-202ENST00000397417 SETQ01105 290 aaPredicted RBP12.16□□□□□ -0.46
IFT140-202ENST00000397417 TAF12Q16514 161 aa12.16□□□□□ -0.46
IFT140-202ENST00000397417 VWA3BQ502W6 1294 aa12.16□□□□□ -0.46
IFT140-202ENST00000397417 KCTD16Q68DU8 428 aa12.16□□□□□ -0.46
IFT140-202ENST00000397417 RHPN2Q8IUC4 686 aa12.16□□□□□ -0.46
IFT140-202ENST00000397417 ENGASEQ8NFI3 743 aa12.16□□□□□ -0.46
IFT140-202ENST00000397417 TAAR1Q96RJ0 339 aa12.16□□□□□ -0.46
IFT140-202ENST00000397417 NUDT12Q9BQG2 462 aa12.16□□□□□ -0.46
IFT140-202ENST00000397417 PCDHB4Q9Y5E5 795 aa12.16□□□□□ -0.46
IFT140-202ENST00000397417 WNT10BO00744 389 aa12.16□□□□□ -0.46
IFT140-202ENST00000397417 CD44P16070 742 aaKnown RBP12.16□□□□□ -0.46
IFT140-202ENST00000397417 EEF1GP26641 437 aaKnown RBP12.16□□□□□ -0.46
IFT140-202ENST00000397417 TRIP13Q15645 432 aaPredicted RBP12.16□□□□□ -0.46
IFT140-202ENST00000397417 FAM149B1Q96BN6 582 aa12.16□□□□□ -0.46
IFT140-202ENST00000397417 AP1M1Q9BXS5 423 aa12.16□□□□□ -0.46
IFT140-202ENST00000397417 ADD3Q9UEY8 706 aaKnown RBP12.16□□□□□ -0.46
IFT140-202ENST00000397417 MYO3BQ8WXR4 1341 aa12.16□□□□□ -0.46
IFT140-202ENST00000397417 SPDYE2BA6NHP3 402 aa12.16□□□□□ -0.46
IFT140-202ENST00000397417 SPDYE6P0CI01 402 aa12.16□□□□□ -0.46
IFT140-202ENST00000397417 SHMT1P34896 483 aa12.16□□□□□ -0.46
IFT140-202ENST00000397417 DYNLT1P63172 113 aa12.16□□□□□ -0.46
IFT140-202ENST00000397417 TNNC1P63316 161 aa12.16□□□□□ -0.46
IFT140-202ENST00000397417 LACTBP83111 547 aaPredicted RBP12.16□□□□□ -0.46
IFT140-202ENST00000397417 C2orf54Q08AI8 447 aa12.16□□□□□ -0.46
IFT140-202ENST00000397417 CALCOCO2Q13137 446 aa12.16□□□□□ -0.46
IFT140-202ENST00000397417 SMAD1Q15797 465 aaKnown RBP12.16□□□□□ -0.46
IFT140-202ENST00000397417 TMED8Q6PL24 325 aaPredicted RBP12.16□□□□□ -0.46
IFT140-202ENST00000397417 RIC8AQ9NPQ8 531 aa12.16□□□□□ -0.46
IFT140-202ENST00000397417 PLEKHG2Q9H7P9 1386 aa12.16□□□□□ -0.46
IFT140-202ENST00000397417 PRRC2BQ5JSZ5 2229 aaKnown RBP12.16□□□□□ -0.46
IFT140-202ENST00000397417 PIK3R2O00459 728 aa12.15□□□□□ -0.46
IFT140-202ENST00000397417 NR3C1P04150 777 aa12.15□□□□□ -0.46
IFT140-202ENST00000397417 MYBP10242 640 aa12.15□□□□□ -0.46
IFT140-202ENST00000397417 KIF11P52732 1056 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms