RNA–Protein interactions for RNA: ENST00000397305.3

RBFOX2-204, Transcript of RNA binding fox-1 homolog 2, humanhuman

TSL 5

Gene RBFOX2, Length 759 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX2-204ENST00000397305 SEC31AO94979 1220 aaKnown RBP11.7□□□□□ -0.54
RBFOX2-204ENST00000397305 PDGFRBP09619 1106 aa11.7□□□□□ -0.54
RBFOX2-204ENST00000397305 SKIP12755 728 aa11.7□□□□□ -0.54
RBFOX2-204ENST00000397305 S100A5P33763 92 aa11.7□□□□□ -0.54
RBFOX2-204ENST00000397305 MATR3P43243 847 aaKnown RBP eCLIP11.7□□□□□ -0.54
RBFOX2-204ENST00000397305 AARSP49588 968 aaKnown RBP eCLIP11.7□□□□□ -0.54
RBFOX2-204ENST00000397305 SNW1Q13573 536 aaKnown RBP11.7□□□□□ -0.54
RBFOX2-204ENST00000397305 NTRK3Q16288 839 aa11.7□□□□□ -0.54
RBFOX2-204ENST00000397305 TSR1Q2NL82 804 aaKnown RBP11.7□□□□□ -0.54
RBFOX2-204ENST00000397305 MAP7D1Q3KQU3 841 aa11.7□□□□□ -0.54
RBFOX2-204ENST00000397305 CFAP100Q494V2 611 aa11.7□□□□□ -0.54
RBFOX2-204ENST00000397305 CCDC14Q49A88 953 aa11.7□□□□□ -0.54
RBFOX2-204ENST00000397305 KRT40Q6A162 431 aa11.7□□□□□ -0.54
RBFOX2-204ENST00000397305 OTUD7BQ6GQQ9 843 aa11.7□□□□□ -0.54
RBFOX2-204ENST00000397305 FAM173BQ6P4H8 233 aa11.7□□□□□ -0.54
RBFOX2-204ENST00000397305 MAATS1Q7Z4T9 603 aa11.7□□□□□ -0.54
RBFOX2-204ENST00000397305 NANOGNBQ7Z5D8 188 aa11.7□□□□□ -0.54
RBFOX2-204ENST00000397305 C11orf96Q7Z7L8 435 aa11.7□□□□□ -0.54
RBFOX2-204ENST00000397305 PCGF5Q86SE9 256 aa11.7□□□□□ -0.54
RBFOX2-204ENST00000397305 SLC15A3Q8IY34 581 aa11.7□□□□□ -0.54
RBFOX2-204ENST00000397305 CCDC82Q8N4S0 544 aa11.7□□□□□ -0.54
RBFOX2-204ENST00000397305 PNMA1Q8ND90 353 aa11.7□□□□□ -0.54
RBFOX2-204ENST00000397305 SMC1BQ8NDV3 1235 aa11.7□□□□□ -0.54
RBFOX2-204ENST00000397305 NEDD1Q8NHV4 660 aa11.7□□□□□ -0.54
RBFOX2-204ENST00000397305 OPTNQ96CV9 577 aa11.7□□□□□ -0.54
RBFOX2-204ENST00000397305 SMC6Q96SB8 1091 aa11.7□□□□□ -0.54
RBFOX2-204ENST00000397305 SLC7A5P2Q9GIP4 190 aa11.7□□□□□ -0.54
RBFOX2-204ENST00000397305 YIPF3Q9GZM5 350 aa11.7□□□□□ -0.54
RBFOX2-204ENST00000397305 DDX4Q9NQI0 724 aaKnown RBP11.7□□□□□ -0.54
RBFOX2-204ENST00000397305 IGSF5Q9NSI5 407 aa11.7□□□□□ -0.54
RBFOX2-204ENST00000397305 FAM217BQ9NTX9 383 aaPredicted RBP11.7□□□□□ -0.54
RBFOX2-204ENST00000397305 SEPT10Q9P0V9 454 aa11.7□□□□□ -0.54
RBFOX2-204ENST00000397305 TFIP11Q9UBB9 837 aaKnown RBP11.7□□□□□ -0.54
RBFOX2-204ENST00000397305 SERPINB13Q9UIV8 391 aa11.7□□□□□ -0.54
RBFOX2-204ENST00000397305 ZNRF3Q9ULT6 936 aa11.7□□□□□ -0.54
RBFOX2-204ENST00000397305 STX8Q9UNK0 236 aa11.7□□□□□ -0.54
RBFOX2-204ENST00000397305 BCS1LQ9Y276 419 aa11.7□□□□□ -0.54
RBFOX2-204ENST00000397305 LRRIQ3A6PVS8 624 aaPredicted RBP11.69□□□□□ -0.54
RBFOX2-204ENST00000397305 PSMD14O00487 310 aa11.69□□□□□ -0.54
RBFOX2-204ENST00000397305 CYTH3O43739 400 aa11.69□□□□□ -0.54
RBFOX2-204ENST00000397305 PPP1R12BO60237 982 aaPredicted RBP11.69□□□□□ -0.54
RBFOX2-204ENST00000397305 LINGO3P0C6S8 592 aa11.69□□□□□ -0.54
RBFOX2-204ENST00000397305 CLK1P49759 484 aaKnown RBP11.69□□□□□ -0.54
RBFOX2-204ENST00000397305 ZNF75DP51815 510 aa11.69□□□□□ -0.54
RBFOX2-204ENST00000397305 PPIDQ08752 370 aaKnown RBP11.69□□□□□ -0.54
RBFOX2-204ENST00000397305 TCP10Q12799 353 aa11.69□□□□□ -0.54
RBFOX2-204ENST00000397305 LBRQ14739 615 aaKnown RBP11.69□□□□□ -0.54
RBFOX2-204ENST00000397305 DLGAP5Q15398 846 aa11.69□□□□□ -0.54
RBFOX2-204ENST00000397305 CCDC144BQ3MJ40 725 aa11.69□□□□□ -0.54
RBFOX2-204ENST00000397305 CMPK2Q5EBM0 449 aa11.69□□□□□ -0.54
RBFOX2-204ENST00000397305 AGAP9Q5VTM2 703 aa11.69□□□□□ -0.54
RBFOX2-204ENST00000397305 NEK10Q6ZWH5 1172 aa11.69□□□□□ -0.54
RBFOX2-204ENST00000397305 TMTC3Q6ZXV5 915 aa11.69□□□□□ -0.54
RBFOX2-204ENST00000397305 RSRC2Q7L4I2 434 aaKnown RBP11.69□□□□□ -0.54
RBFOX2-204ENST00000397305 HOOK3Q86VS8 718 aa11.69□□□□□ -0.54
RBFOX2-204ENST00000397305 CCDC155Q8N6L0 562 aa11.69□□□□□ -0.54
RBFOX2-204ENST00000397305 MAIP1Q8WWC4 291 aa11.69□□□□□ -0.54
RBFOX2-204ENST00000397305 ANKS1AQ92625 1134 aa11.69□□□□□ -0.54
RBFOX2-204ENST00000397305 SNX27Q96L92 541 aa11.69□□□□□ -0.54
RBFOX2-204ENST00000397305 MYO1AQ9UBC5 1043 aa11.69□□□□□ -0.54
RBFOX2-204ENST00000397305 MAFFQ9ULX9 164 aa11.69□□□□□ -0.54
RBFOX2-204ENST00000397305 ASB3Q9Y575 518 aa11.69□□□□□ -0.54
RBFOX2-204ENST00000397305 PSME4Q14997 1843 aa11.69□□□□□ -0.54
RBFOX2-204ENST00000397305 MYH8P13535 1937 aa11.68□□□□□ -0.54
RBFOX2-204ENST00000397305 MYH15Q9Y2K3 1946 aa11.68□□□□□ -0.54
RBFOX2-204ENST00000397305 MYO1FO00160 1098 aa11.68□□□□□ -0.54
RBFOX2-204ENST00000397305 SMIM24O75264 130 aa11.68□□□□□ -0.54
RBFOX2-204ENST00000397305 GADD45BO75293 160 aaPredicted RBP11.68□□□□□ -0.54
RBFOX2-204ENST00000397305 HOXD12P35452 270 aa11.68□□□□□ -0.54
RBFOX2-204ENST00000397305 GSDMDP57764 484 aa11.68□□□□□ -0.54
RBFOX2-204ENST00000397305 KIF23Q02241 960 aaPredicted RBP11.68□□□□□ -0.54
RBFOX2-204ENST00000397305 CEBPZQ03701 1054 aaKnown RBP11.68□□□□□ -0.54
RBFOX2-204ENST00000397305 SULT2A1Q06520 285 aa11.68□□□□□ -0.54
RBFOX2-204ENST00000397305 WASHC5Q12768 1159 aa11.68□□□□□ -0.54
RBFOX2-204ENST00000397305 TROAPQ12815 778 aa11.68□□□□□ -0.54
RBFOX2-204ENST00000397305 TNIP1Q15025 636 aa11.68□□□□□ -0.54
RBFOX2-204ENST00000397305 WHAMMP3Q1A5X7 153 aa11.68□□□□□ -0.54
RBFOX2-204ENST00000397305 SGSM1Q2NKQ1 1148 aa11.68□□□□□ -0.54
RBFOX2-204ENST00000397305 ADALQ6DHV7 355 aa11.68□□□□□ -0.54
RBFOX2-204ENST00000397305 CIAPIN1Q6FI81 312 aa11.68□□□□□ -0.54
RBFOX2-204ENST00000397305 LRRC8AQ8IWT6 810 aa11.68□□□□□ -0.54
RBFOX2-204ENST00000397305 SAMD14Q8IZD0 417 aaPredicted RBP11.68□□□□□ -0.54
RBFOX2-204ENST00000397305 SYT2Q8N9I0 419 aaPredicted RBP11.68□□□□□ -0.54
RBFOX2-204ENST00000397305 AGBL3Q8NEM8 1001 aa11.68□□□□□ -0.54
RBFOX2-204ENST00000397305 P3H4Q92791 437 aa11.68□□□□□ -0.54
RBFOX2-204ENST00000397305 CENPTQ96BT3 561 aa11.68□□□□□ -0.54
RBFOX2-204ENST00000397305 VMP1Q96GC9 406 aa11.68□□□□□ -0.54
RBFOX2-204ENST00000397305 AIFM3Q96NN9 605 aa11.68□□□□□ -0.54
RBFOX2-204ENST00000397305 TRAPPC9Q96Q05 1148 aa11.68□□□□□ -0.54
RBFOX2-204ENST00000397305 MAP3K14Q99558 947 aa11.68□□□□□ -0.54
RBFOX2-204ENST00000397305 IDI2Q9BXS1 227 aa11.68□□□□□ -0.54
RBFOX2-204ENST00000397305 EHD4Q9H223 541 aa11.68□□□□□ -0.54
RBFOX2-204ENST00000397305 TDRD3Q9H7E2 651 aaKnown RBP11.68□□□□□ -0.54
RBFOX2-204ENST00000397305 SLC40A1Q9NP59 571 aa11.68□□□□□ -0.54
RBFOX2-204ENST00000397305 GALNT8Q9NY28 637 aa11.68□□□□□ -0.54
RBFOX2-204ENST00000397305 IL20Q9NYY1 176 aa11.68□□□□□ -0.54
RBFOX2-204ENST00000397305 ZFATQ9P243 1243 aa11.68□□□□□ -0.54
RBFOX2-204ENST00000397305 ACAD8Q9UKU7 415 aa11.68□□□□□ -0.54
RBFOX2-204ENST00000397305 TMCC3Q9ULS5 477 aa11.68□□□□□ -0.54
RBFOX2-204ENST00000397305 CEP131Q9UPN4 1083 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms