RNA–Protein interactions for RNA: ENST00000397117.5

SEC13-209, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 5 BASIC

Gene SEC13, Length 1,603 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-209ENST00000397117 SLC30A10Q6XR72 485 aa14.93□□□□□ -0.02
SEC13-209ENST00000397117 DTHD1Q6ZMT9 781 aa14.93□□□□□ -0.02
SEC13-209ENST00000397117 C4orf32Q8N8J7 132 aa14.93□□□□□ -0.02
SEC13-209ENST00000397117 FSIP1Q8NA03 581 aa14.93□□□□□ -0.02
SEC13-209ENST00000397117 MRPS27Q92552 414 aaKnown RBP14.93□□□□□ -0.02
SEC13-209ENST00000397117 SYAP1Q96A49 352 aaPredicted RBP14.93□□□□□ -0.02
SEC13-209ENST00000397117 CLIC6Q96NY7 704 aa14.93□□□□□ -0.02
SEC13-209ENST00000397117 MRVI1Q9Y6F6 885 aa14.93□□□□□ -0.02
SEC13-209ENST00000397117 PRRC2BQ5JSZ5 2229 aaKnown RBP14.93□□□□□ -0.02
SEC13-209ENST00000397117 SCN5AQ14524 2016 aa14.92□□□□□ -0.02
SEC13-209ENST00000397117 CYP3A7-CYP3A51PA0A087WV96 503 aa14.92□□□□□ -0.02
SEC13-209ENST00000397117 VWA3AA6NCI4 1184 aa14.92□□□□□ -0.02
SEC13-209ENST00000397117 ZEB2O60315 1214 aa14.92□□□□□ -0.02
SEC13-209ENST00000397117 CYP3A4P08684 503 aa14.92□□□□□ -0.02
SEC13-209ENST00000397117 OR52Z1P0C646 297 aa14.92□□□□□ -0.02
SEC13-209ENST00000397117 CMA1P23946 247 aa14.92□□□□□ -0.02
SEC13-209ENST00000397117 CYP3A7P24462 503 aa14.92□□□□□ -0.02
SEC13-209ENST00000397117 RABGGTBP53611 331 aa14.92□□□□□ -0.02
SEC13-209ENST00000397117 PSMC6P62333 389 aa14.92□□□□□ -0.02
SEC13-209ENST00000397117 POTEDQ86YR6 584 aa14.92□□□□□ -0.02
SEC13-209ENST00000397117 RPUSD2Q8IZ73 545 aaKnown RBP14.92□□□□□ -0.02
SEC13-209ENST00000397117 ZNF579Q8NAF0 562 aaKnown RBP14.92□□□□□ -0.02
SEC13-209ENST00000397117 MORC4Q8TE76 937 aa14.92□□□□□ -0.02
SEC13-209ENST00000397117 CRYGNQ8WXF5 182 aa14.92□□□□□ -0.02
SEC13-209ENST00000397117 UHRF1Q96T88 793 aaPredicted RBP14.92□□□□□ -0.02
SEC13-209ENST00000397117 RMDN3Q96TC7 470 aa14.92□□□□□ -0.02
SEC13-209ENST00000397117 CYP39A1Q9NYL5 469 aa14.92□□□□□ -0.02
SEC13-209ENST00000397117 COL20A1Q9P218 1284 aa14.92□□□□□ -0.02
SEC13-209ENST00000397117 RAPGEFL1Q9UHV5 662 aa14.92□□□□□ -0.02
SEC13-209ENST00000397117 PCDHA11Q9Y5I1 949 aa14.92□□□□□ -0.02
SEC13-209ENST00000397117 SLC37A4O43826 429 aa14.92□□□□□ -0.02
SEC13-209ENST00000397117 PRPHP41219 470 aa14.92□□□□□ -0.02
SEC13-209ENST00000397117 ARHGEF16Q5VV41 709 aa14.92□□□□□ -0.02
SEC13-209ENST00000397117 CAVIN1Q6NZI2 390 aaKnown RBP14.92□□□□□ -0.02
SEC13-209ENST00000397117 TMEM60Q9H2L4 133 aa14.92□□□□□ -0.02
SEC13-209ENST00000397117 FAM13BQ9NYF5 915 aa14.92□□□□□ -0.02
SEC13-209ENST00000397117 SLC4A7Q9Y6M7 1214 aa14.92□□□□□ -0.02
SEC13-209ENST00000397117 TRANK1O15050 2925 aa14.91□□□□□ -0.02
SEC13-209ENST00000397117 A0A1B0GVL5 298 aa14.91□□□□□ -0.02
SEC13-209ENST00000397117 EDIL3O43854 480 aa14.91□□□□□ -0.02
SEC13-209ENST00000397117 BMP1P13497 986 aa14.91□□□□□ -0.02
SEC13-209ENST00000397117 MYOGP15173 224 aa14.91□□□□□ -0.02
SEC13-209ENST00000397117 LIG1P18858 919 aa14.91□□□□□ -0.02
SEC13-209ENST00000397117 CIITAP33076 1130 aa14.91□□□□□ -0.02
SEC13-209ENST00000397117 PRR16Q569H4 304 aa14.91□□□□□ -0.02
SEC13-209ENST00000397117 RESP18Q5W5W9 173 aa14.91□□□□□ -0.02
SEC13-209ENST00000397117 EEPD1Q7L9B9 569 aa14.91□□□□□ -0.02
SEC13-209ENST00000397117 FBXO16Q8IX29 292 aaPredicted RBP14.91□□□□□ -0.02
SEC13-209ENST00000397117 TAAR1Q96RJ0 339 aa14.91□□□□□ -0.02
SEC13-209ENST00000397117 CSRNP2Q9H175 543 aa14.91□□□□□ -0.02
SEC13-209ENST00000397117 VTA1Q9NP79 307 aa14.91□□□□□ -0.02
SEC13-209ENST00000397117 EIF2AK2P19525 551 aaKnown RBP14.9□□□□□ -0.02
SEC13-209ENST00000397117 LONP1P36776 959 aaKnown RBP14.9□□□□□ -0.02
SEC13-209ENST00000397117 GRIN1Q05586 938 aa14.9□□□□□ -0.02
SEC13-209ENST00000397117 FAM160A1Q05DH4 1040 aa14.9□□□□□ -0.02
SEC13-209ENST00000397117 TMEM266Q2M3C6 531 aa14.9□□□□□ -0.02
SEC13-209ENST00000397117 Q4G0T1 1027 aa14.9□□□□□ -0.02
SEC13-209ENST00000397117 SHC4Q6S5L8 630 aa14.9□□□□□ -0.02
SEC13-209ENST00000397117 NSUN6Q8TEA1 469 aaKnown RBP14.9□□□□□ -0.02
SEC13-209ENST00000397117 SCLYQ96I15 445 aa14.9□□□□□ -0.02
SEC13-209ENST00000397117 MBOAT7Q96N66 472 aa14.9□□□□□ -0.02
SEC13-209ENST00000397117 PURBQ96QR8 312 aaKnown RBP14.9□□□□□ -0.02
SEC13-209ENST00000397117 GOLPH3LQ9H4A5 285 aa14.9□□□□□ -0.02
SEC13-209ENST00000397117 PXMP2Q9NR77 195 aa14.9□□□□□ -0.02
SEC13-209ENST00000397117 REV3LO60673 3130 aa14.9□□□□□ -0.02
SEC13-209ENST00000397117 SCN10AQ9Y5Y9 1956 aa14.9□□□□□ -0.02
SEC13-209ENST00000397117 FAM86B1E9PN63 330 aa14.89□□□□□ -0.03
SEC13-209ENST00000397117 FAM86B2P0C5J1 330 aa14.89□□□□□ -0.03
SEC13-209ENST00000397117 PFKFB1P16118 471 aa14.89□□□□□ -0.03
SEC13-209ENST00000397117 POU3F3P20264 500 aaPredicted RBP14.89□□□□□ -0.03
SEC13-209ENST00000397117 TXKP42681 527 aa14.89□□□□□ -0.03
SEC13-209ENST00000397117 DUSP28Q4G0W2 176 aa14.89□□□□□ -0.03
SEC13-209ENST00000397117 CEP55Q53EZ4 464 aa14.89□□□□□ -0.03
SEC13-209ENST00000397117 SPECC1Q5M775 1068 aa14.89□□□□□ -0.03
SEC13-209ENST00000397117 PCNX4Q63HM2 1172 aa14.89□□□□□ -0.03
SEC13-209ENST00000397117 PPP2R2DQ66LE6 453 aa14.89□□□□□ -0.03
SEC13-209ENST00000397117 SLFN12Q8IYM2 578 aa14.89□□□□□ -0.03
SEC13-209ENST00000397117 MTMR9Q96QG7 549 aa14.89□□□□□ -0.03
SEC13-209ENST00000397117 RAB34Q9BZG1 259 aa14.89□□□□□ -0.03
SEC13-209ENST00000397117 GZF1Q9H116 711 aaPredicted RBP14.89□□□□□ -0.03
SEC13-209ENST00000397117 DACT1Q9NYF0 836 aa14.89□□□□□ -0.03
SEC13-209ENST00000397117 MYH7BA7E2Y1 1941 aa14.89□□□□□ -0.03
SEC13-209ENST00000397117 FRMPD4Q14CM0 1322 aa14.89□□□□□ -0.03
SEC13-209ENST00000397117 TET1Q8NFU7 2136 aa14.89□□□□□ -0.03
SEC13-209ENST00000397117 RBM47A0AV96 593 aaKnown RBP14.88□□□□□ -0.03
SEC13-209ENST00000397117 KINO60870 393 aaKnown RBP14.88□□□□□ -0.03
SEC13-209ENST00000397117 NR1I2O75469 434 aa14.88□□□□□ -0.03
SEC13-209ENST00000397117 ATP2A2P16615 1042 aaKnown RBP14.88□□□□□ -0.03
SEC13-209ENST00000397117 TXLNAP40222 546 aa14.88□□□□□ -0.03
SEC13-209ENST00000397117 NDUFA8P51970 172 aa14.88□□□□□ -0.03
SEC13-209ENST00000397117 SETQ01105 290 aaPredicted RBP14.88□□□□□ -0.03
SEC13-209ENST00000397117 TTLL4Q14679 1199 aa14.88□□□□□ -0.03
SEC13-209ENST00000397117 PGM5Q15124 567 aa14.88□□□□□ -0.03
SEC13-209ENST00000397117 IL17AQ16552 155 aa14.88□□□□□ -0.03
SEC13-209ENST00000397117 XRRA1Q6P2D8 792 aa14.88□□□□□ -0.03
SEC13-209ENST00000397117 TSPYL2Q9H2G4 693 aaPredicted RBP14.88□□□□□ -0.03
SEC13-209ENST00000397117 DDX19AQ9NUU7 478 aaKnown RBP14.88□□□□□ -0.03
SEC13-209ENST00000397117 TRIP12Q14669 1992 aaPredicted RBP14.88□□□□□ -0.03
SEC13-209ENST00000397117 TBX3O15119 743 aa14.88□□□□□ -0.03
SEC13-209ENST00000397117 PFKMP08237 780 aa14.88□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms