RNA–Protein interactions for RNA: ENST00000397105.7

SEC13-207, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 883 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-207ENST00000397105 CHMP2AO43633 222 aa23.6■■□□□ 1.37
SEC13-207ENST00000397105 PDCP20941 246 aa23.6■■□□□ 1.37
SEC13-207ENST00000397105 TRAPPC10P48553 1259 aa23.6■■□□□ 1.37
SEC13-207ENST00000397105 BFSP2Q13515 415 aa23.6■■□□□ 1.37
SEC13-207ENST00000397105 MFSD5Q6N075 450 aa23.6■■□□□ 1.37
SEC13-207ENST00000397105 POTEDQ86YR6 584 aa23.6■■□□□ 1.37
SEC13-207ENST00000397105 SLFN12Q8IYM2 578 aa23.6■■□□□ 1.37
SEC13-207ENST00000397105 RDM1Q8NG50 284 aa23.6■■□□□ 1.37
SEC13-207ENST00000397105 PPP1R12CQ9BZL4 782 aa23.6■■□□□ 1.37
SEC13-207ENST00000397105 UNC45AQ9H3U1 944 aa23.6■■□□□ 1.37
SEC13-207ENST00000397105 SETD4Q9NVD3 440 aa23.6■■□□□ 1.37
SEC13-207ENST00000397105 PCDH10Q9P2E7 1040 aa23.6■■□□□ 1.37
SEC13-207ENST00000397105 RANBP2P49792 3224 aaKnown RBP23.59■■□□□ 1.37
SEC13-207ENST00000397105 NEMFO60524 1076 aa23.59■■□□□ 1.37
SEC13-207ENST00000397105 HOXC8P31273 242 aa23.59■■□□□ 1.37
SEC13-207ENST00000397105 CYP2C18P33260 490 aa23.59■■□□□ 1.37
SEC13-207ENST00000397105 BMP8BP34820 402 aa23.59■■□□□ 1.37
SEC13-207ENST00000397105 PPFIA1Q13136 1202 aa23.59■■□□□ 1.37
SEC13-207ENST00000397105 PTK7Q13308 1070 aa23.59■■□□□ 1.37
SEC13-207ENST00000397105 CALCRLQ16602 461 aa23.59■■□□□ 1.37
SEC13-207ENST00000397105 PDXDC2PQ6P474 469 aa23.59■■□□□ 1.37
SEC13-207ENST00000397105 CCDC60Q8IWA6 550 aaPredicted RBP23.59■■□□□ 1.37
SEC13-207ENST00000397105 TMEM199Q8N511 208 aa23.59■■□□□ 1.37
SEC13-207ENST00000397105 CCDC155Q8N6L0 562 aa23.59■■□□□ 1.37
SEC13-207ENST00000397105 RETREG2Q8NC44 543 aa23.59■■□□□ 1.37
SEC13-207ENST00000397105 HAS1Q92839 578 aa23.59■■□□□ 1.37
SEC13-207ENST00000397105 ATP6V0A1Q93050 837 aa23.59■■□□□ 1.37
SEC13-207ENST00000397105 CTAGE1Q96RT6 745 aa23.59■■□□□ 1.37
SEC13-207ENST00000397105 TRPC6Q9Y210 931 aa23.59■■□□□ 1.37
SEC13-207ENST00000397105 COLQQ9Y215 455 aaPredicted RBP23.59■■□□□ 1.37
SEC13-207ENST00000397105 DOCK5Q9H7D0 1870 aa23.58■■□□□ 1.37
SEC13-207ENST00000397105 ZNF200P98182 395 aaPredicted RBP23.58■■□□□ 1.37
SEC13-207ENST00000397105 ORC2Q13416 577 aaPredicted RBP23.58■■□□□ 1.37
SEC13-207ENST00000397105 HIC1Q14526 733 aa23.58■■□□□ 1.37
SEC13-207ENST00000397105 MIER3Q7Z3K6 550 aa23.58■■□□□ 1.37
SEC13-207ENST00000397105 UBE2OQ9C0C9 1292 aaKnown RBP23.58■■□□□ 1.37
SEC13-207ENST00000397105 GABBR1Q9UBS5 961 aa23.58■■□□□ 1.37
SEC13-207ENST00000397105 MAFBQ9Y5Q3 323 aaPredicted RBP23.58■■□□□ 1.37
SEC13-207ENST00000397105 POTEB3A0JP26 581 aa23.57■■□□□ 1.36
SEC13-207ENST00000397105 PITPNM1O00562 1244 aa23.57■■□□□ 1.36
SEC13-207ENST00000397105 MCM7P33993 719 aa23.57■■□□□ 1.36
SEC13-207ENST00000397105 FPGSQ05932 587 aa23.57■■□□□ 1.36
SEC13-207ENST00000397105 PPP2R5CQ13362 524 aa23.57■■□□□ 1.36
SEC13-207ENST00000397105 PLCB4Q15147 1175 aa23.57■■□□□ 1.36
SEC13-207ENST00000397105 POTEBQ6S5H4 581 aa23.57■■□□□ 1.36
SEC13-207ENST00000397105 B3GNT9Q6UX72 402 aa23.57■■□□□ 1.36
SEC13-207ENST00000397105 SERINC5Q86VE9 423 aa23.57■■□□□ 1.36
SEC13-207ENST00000397105 CKAP2LQ8IYA6 745 aa23.57■■□□□ 1.36
SEC13-207ENST00000397105 CAGE1Q8TC20 777 aa23.57■■□□□ 1.36
SEC13-207ENST00000397105 LMBR1Q8WVP7 490 aa23.57■■□□□ 1.36
SEC13-207ENST00000397105 PRO3102Q9H379 93 aa23.57■■□□□ 1.36
SEC13-207ENST00000397105 VAV3Q9UKW4 847 aa23.57■■□□□ 1.36
SEC13-207ENST00000397105 RRN3P2A6NIE6 340 aa23.56■■□□□ 1.36
SEC13-207ENST00000397105 WNT7AO00755 349 aa23.56■■□□□ 1.36
SEC13-207ENST00000397105 TREHO43280 583 aa23.56■■□□□ 1.36
SEC13-207ENST00000397105 INSRRP14616 1297 aa23.56■■□□□ 1.36
SEC13-207ENST00000397105 ZNF174Q15697 407 aa23.56■■□□□ 1.36
SEC13-207ENST00000397105 GRIK4Q16099 956 aa23.56■■□□□ 1.36
SEC13-207ENST00000397105 TTC38Q5R3I4 469 aa23.56■■□□□ 1.36
SEC13-207ENST00000397105 ATP8B4Q8TF62 1192 aa23.56■■□□□ 1.36
SEC13-207ENST00000397105 FOXD4L1Q9NU39 408 aa23.56■■□□□ 1.36
SEC13-207ENST00000397105 UMODL1Q5DID0 1318 aa23.56■■□□□ 1.36
SEC13-207ENST00000397105 HSP90AA1P07900 732 aaKnown RBP23.55■■□□□ 1.36
SEC13-207ENST00000397105 CCL23P55773 120 aa23.55■■□□□ 1.36
SEC13-207ENST00000397105 MTMR9Q96QG7 549 aa23.55■■□□□ 1.36
SEC13-207ENST00000397105 PCDHA12Q9UN75 941 aa23.55■■□□□ 1.36
SEC13-207ENST00000397105 HBP1O60381 514 aa23.54■■□□□ 1.36
SEC13-207ENST00000397105 IGBP1P78318 339 aa23.54■■□□□ 1.36
SEC13-207ENST00000397105 ADAM17P78536 824 aa23.54■■□□□ 1.36
SEC13-207ENST00000397105 PPIGQ13427 754 aaKnown RBP eCLIP23.54■■□□□ 1.36
SEC13-207ENST00000397105 BBXQ8WY36 941 aaPredicted RBP23.54■■□□□ 1.36
SEC13-207ENST00000397105 DHX38Q92620 1227 aaKnown RBP23.54■■□□□ 1.36
SEC13-207ENST00000397105 WNT8AQ9H1J5 351 aa23.54■■□□□ 1.36
SEC13-207ENST00000397105 CSF2RAP15509 400 aa23.53■■□□□ 1.36
SEC13-207ENST00000397105 ATP4AP20648 1035 aa23.53■■□□□ 1.36
SEC13-207ENST00000397105 TXKP42681 527 aa23.53■■□□□ 1.36
SEC13-207ENST00000397105 TOB1P50616 345 aaPredicted RBP23.53■■□□□ 1.36
SEC13-207ENST00000397105 RBL2Q08999 1139 aa23.53■■□□□ 1.36
SEC13-207ENST00000397105 RILPL1Q5EBL4 403 aa23.53■■□□□ 1.36
SEC13-207ENST00000397105 TAF2Q6P1X5 1199 aa23.53■■□□□ 1.36
SEC13-207ENST00000397105 FAM167AQ96KS9 214 aa23.53■■□□□ 1.36
SEC13-207ENST00000397105 TTC12Q9H892 705 aaPredicted RBP23.53■■□□□ 1.36
SEC13-207ENST00000397105 NRBP2Q9NSY0 501 aa23.53■■□□□ 1.36
SEC13-207ENST00000397105 TUBE1Q9UJT0 475 aa23.53■■□□□ 1.36
SEC13-207ENST00000397105 IGSF9BQ9UPX0 1349 aa23.53■■□□□ 1.36
SEC13-207ENST00000397105 A0A1W2PPC1 479 aa23.52■■□□□ 1.36
SEC13-207ENST00000397105 MBLAC1A4D2B0 266 aaPredicted RBP23.52■■□□□ 1.36
SEC13-207ENST00000397105 VPS37CA5D8V6 355 aaPredicted RBP23.52■■□□□ 1.36
SEC13-207ENST00000397105 EML1O00423 815 aa23.52■■□□□ 1.36
SEC13-207ENST00000397105 IQCF3P0C7M6 154 aa23.52■■□□□ 1.36
SEC13-207ENST00000397105 CKBP12277 381 aa23.52■■□□□ 1.36
SEC13-207ENST00000397105 SELPP16109 830 aa23.52■■□□□ 1.36
SEC13-207ENST00000397105 SYT1P21579 422 aa23.52■■□□□ 1.36
SEC13-207ENST00000397105 THPOP40225 353 aa23.52■■□□□ 1.36
SEC13-207ENST00000397105 TRIM71Q2Q1W2 868 aaKnown RBP23.52■■□□□ 1.36
SEC13-207ENST00000397105 ZNF484Q5JVG2 852 aa23.52■■□□□ 1.36
SEC13-207ENST00000397105 MARCH8Q5T0T0 291 aa23.52■■□□□ 1.36
SEC13-207ENST00000397105 RPUSD2Q8IZ73 545 aaKnown RBP23.52■■□□□ 1.36
SEC13-207ENST00000397105 TMEM60Q9H2L4 133 aa23.52■■□□□ 1.36
SEC13-207ENST00000397105 RFC2P35250 354 aa23.51■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 91.3 ms