RNA–Protein interactions for RNA: ENST00000397099.1

SEC13-204, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 4

Gene SEC13, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-204ENST00000397099 MYOGP15173 224 aa15.83■□□□□ 0.12
SEC13-204ENST00000397099 IGFBP4P22692 258 aa15.83■□□□□ 0.12
SEC13-204ENST00000397099 ADAM17P78536 824 aa15.83■□□□□ 0.12
SEC13-204ENST00000397099 KRT76Q01546 638 aa15.83■□□□□ 0.12
SEC13-204ENST00000397099 PPFIA1Q13136 1202 aa15.83■□□□□ 0.12
SEC13-204ENST00000397099 STK3Q13188 491 aa15.83■□□□□ 0.12
SEC13-204ENST00000397099 IKBKEQ14164 716 aa15.83■□□□□ 0.12
SEC13-204ENST00000397099 ZNF618Q5T7W0 954 aa15.83■□□□□ 0.12
SEC13-204ENST00000397099 FAM160B1Q5W0V3 765 aa15.83■□□□□ 0.12
SEC13-204ENST00000397099 PPP2R2DQ66LE6 453 aa15.83■□□□□ 0.12
SEC13-204ENST00000397099 ZNF746Q6NUN9 644 aaPredicted RBP15.83■□□□□ 0.12
SEC13-204ENST00000397099 TRIM50Q86XT4 487 aa15.83■□□□□ 0.12
SEC13-204ENST00000397099 SETD4Q9NVD3 440 aa15.83■□□□□ 0.12
SEC13-204ENST00000397099 PKD2L1Q9P0L9 805 aa15.83■□□□□ 0.12
SEC13-204ENST00000397099 MYH9P35579 1960 aaKnown RBP15.82■□□□□ 0.12
SEC13-204ENST00000397099 TET1Q8NFU7 2136 aa15.82■□□□□ 0.12
SEC13-204ENST00000397099 STAT5BP51692 787 aa15.82■□□□□ 0.12
SEC13-204ENST00000397099 AK2P54819 239 aa15.82■□□□□ 0.12
SEC13-204ENST00000397099 ZNF200P98182 395 aaPredicted RBP15.82■□□□□ 0.12
SEC13-204ENST00000397099 SCRN1Q12765 414 aa15.82■□□□□ 0.12
SEC13-204ENST00000397099 ITGB3BPQ13352 177 aaPredicted RBP15.82■□□□□ 0.12
SEC13-204ENST00000397099 MIS18BP1Q6P0N0 1132 aa15.82■□□□□ 0.12
SEC13-204ENST00000397099 MOXD1Q6UVY6 613 aa15.82■□□□□ 0.12
SEC13-204ENST00000397099 BLIDQ8IZY5 108 aa15.82■□□□□ 0.12
SEC13-204ENST00000397099 LMBR1Q8WVP7 490 aa15.82■□□□□ 0.12
SEC13-204ENST00000397099 COL25A1Q9BXS0 654 aaPredicted RBP15.82■□□□□ 0.12
SEC13-204ENST00000397099 TUBE1Q9UJT0 475 aa15.82■□□□□ 0.12
SEC13-204ENST00000397099 TPCN1Q9ULQ1 816 aa15.82■□□□□ 0.12
SEC13-204ENST00000397099 GBF1Q92538 1859 aa15.82■□□□□ 0.12
SEC13-204ENST00000397099 IGKV6D-21A0A0A0MT36 114 aa15.81■□□□□ 0.12
SEC13-204ENST00000397099 MBLAC1A4D2B0 266 aaPredicted RBP15.81■□□□□ 0.12
SEC13-204ENST00000397099 NEK4P51957 841 aa15.81■□□□□ 0.12
SEC13-204ENST00000397099 GRIK4Q16099 956 aa15.81■□□□□ 0.12
SEC13-204ENST00000397099 FAM26DQ5JW98 314 aa15.81■□□□□ 0.12
SEC13-204ENST00000397099 KRT25Q7Z3Z0 450 aa15.81■□□□□ 0.12
SEC13-204ENST00000397099 APBB2Q92870 758 aa15.81■□□□□ 0.12
SEC13-204ENST00000397099 RIT2Q99578 217 aa15.81■□□□□ 0.12
SEC13-204ENST00000397099 NAP1L4Q99733 375 aaKnown RBP15.81■□□□□ 0.12
SEC13-204ENST00000397099 PRUNE2Q8WUY3 3088 aa15.81■□□□□ 0.12
SEC13-204ENST00000397099 COL1A2P08123 1366 aa15.8■□□□□ 0.12
SEC13-204ENST00000397099 NBNO60934 754 aa15.8■□□□□ 0.12
SEC13-204ENST00000397099 SFNP31947 248 aa15.8■□□□□ 0.12
SEC13-204ENST00000397099 HIC1Q14526 733 aa15.8■□□□□ 0.12
SEC13-204ENST00000397099 PRR16Q569H4 304 aa15.8■□□□□ 0.12
SEC13-204ENST00000397099 TRAF7Q6Q0C0 670 aa15.8■□□□□ 0.12
SEC13-204ENST00000397099 ABHD15Q6UXT9 468 aa15.8■□□□□ 0.12
SEC13-204ENST00000397099 USP38Q8NB14 1042 aa15.8■□□□□ 0.12
SEC13-204ENST00000397099 SEPT8Q92599 483 aa15.8■□□□□ 0.12
SEC13-204ENST00000397099 BRMS1Q9HCU9 246 aa15.8■□□□□ 0.12
SEC13-204ENST00000397099 TRPC6Q9Y210 931 aa15.8■□□□□ 0.12
SEC13-204ENST00000397099 SQORQ9Y6N5 450 aa15.8■□□□□ 0.12
SEC13-204ENST00000397099 CYP3A7-CYP3A51PA0A087WV96 503 aa15.79■□□□□ 0.12
SEC13-204ENST00000397099 POTEB3A0JP26 581 aa15.79■□□□□ 0.12
SEC13-204ENST00000397099 M0R2N6 131 aa15.79■□□□□ 0.12
SEC13-204ENST00000397099 BACH1O14867 736 aa15.79■□□□□ 0.12
SEC13-204ENST00000397099 DHX15O43143 795 aaKnown RBP15.79■□□□□ 0.12
SEC13-204ENST00000397099 HBP1O60381 514 aa15.79■□□□□ 0.12
SEC13-204ENST00000397099 CA3P07451 260 aa15.79■□□□□ 0.12
SEC13-204ENST00000397099 PSAPP07602 524 aa15.79■□□□□ 0.12
SEC13-204ENST00000397099 CYP3A7P24462 503 aa15.79■□□□□ 0.12
SEC13-204ENST00000397099 MARK3P27448 753 aa15.79■□□□□ 0.12
SEC13-204ENST00000397099 GPNMBQ14956 572 aa15.79■□□□□ 0.12
SEC13-204ENST00000397099 NONOQ15233 471 aaKnown RBP eCLIP15.79■□□□□ 0.12
SEC13-204ENST00000397099 CCDC85BQ15834 202 aaPredicted RBP15.79■□□□□ 0.12
SEC13-204ENST00000397099 Q4G0T1 1027 aa15.79■□□□□ 0.12
SEC13-204ENST00000397099 PLEKHG4Q58EX7 1191 aa15.79■□□□□ 0.12
SEC13-204ENST00000397099 IER5Q5VY09 327 aa15.79■□□□□ 0.12
SEC13-204ENST00000397099 POTEBQ6S5H4 581 aa15.79■□□□□ 0.12
SEC13-204ENST00000397099 HERC6Q8IVU3 1022 aa15.79■□□□□ 0.12
SEC13-204ENST00000397099 ZNF710Q8N1W2 664 aa15.79■□□□□ 0.12
SEC13-204ENST00000397099 NME8Q8N427 588 aa15.79■□□□□ 0.12
SEC13-204ENST00000397099 RDM1Q8NG50 284 aa15.79■□□□□ 0.12
SEC13-204ENST00000397099 TBCKQ8TEA7 893 aa15.79■□□□□ 0.12
SEC13-204ENST00000397099 GTF3C6Q969F1 213 aa15.79■□□□□ 0.12
SEC13-204ENST00000397099 PCYT2Q99447 389 aa15.79■□□□□ 0.12
SEC13-204ENST00000397099 LARP6Q9BRS8 491 aaKnown RBP15.79■□□□□ 0.12
SEC13-204ENST00000397099 PHF20Q9BVI0 1012 aa15.79■□□□□ 0.12
SEC13-204ENST00000397099 ZNF302Q9NR11 478 aa15.79■□□□□ 0.12
SEC13-204ENST00000397099 CEP131Q9UPN4 1083 aa15.79■□□□□ 0.12
SEC13-204ENST00000397099 PCDHA10Q9Y5I2 948 aa15.79■□□□□ 0.12
SEC13-204ENST00000397099 CCDC194A0A1B0GVG4 234 aa15.78■□□□□ 0.12
SEC13-204ENST00000397099 WDR64B1ANS9 1081 aa15.78■□□□□ 0.12
SEC13-204ENST00000397099 M0QZ92 97 aa15.78■□□□□ 0.12
SEC13-204ENST00000397099 INSRRP14616 1297 aa15.78■□□□□ 0.12
SEC13-204ENST00000397099 GCFC2P16383 781 aaKnown RBP15.78■□□□□ 0.12
SEC13-204ENST00000397099 JAK3P52333 1124 aa15.78■□□□□ 0.12
SEC13-204ENST00000397099 WDR5P61964 334 aaKnown RBP15.78■□□□□ 0.12
SEC13-204ENST00000397099 ADGRE1Q14246 886 aa15.78■□□□□ 0.12
SEC13-204ENST00000397099 ZNF484Q5JVG2 852 aa15.78■□□□□ 0.12
SEC13-204ENST00000397099 PDXDC2PQ6P474 469 aa15.78■□□□□ 0.12
SEC13-204ENST00000397099 MICALL1Q8N3F8 863 aa15.78■□□□□ 0.12
SEC13-204ENST00000397099 RASGRP4Q8TDF6 673 aa15.78■□□□□ 0.12
SEC13-204ENST00000397099 ATP8B4Q8TF62 1192 aa15.78■□□□□ 0.12
SEC13-204ENST00000397099 WNT8BQ93098 351 aa15.78■□□□□ 0.12
SEC13-204ENST00000397099 LENG9Q96B70 501 aa15.78■□□□□ 0.12
SEC13-204ENST00000397099 FAM167AQ96KS9 214 aa15.78■□□□□ 0.12
SEC13-204ENST00000397099 ZBED2Q9BTP6 218 aa15.78■□□□□ 0.12
SEC13-204ENST00000397099 ORC3Q9UBD5 711 aaPredicted RBP15.78■□□□□ 0.12
SEC13-204ENST00000397099 PCDHA2Q9Y5H9 948 aa15.78■□□□□ 0.12
SEC13-204ENST00000397099 MICAL3Q7RTP6 2002 aa15.78■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms