RNA–Protein interactions for RNA: ENST00000397081.7

RAPGEF4-201, Transcript of Rap guanine nucleotide exchange factor 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAPGEF4, Length 4,299 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF4-201ENST00000397081 WDR66Q8TBY9 1149 aa16.08■□□□□ 0.16
RAPGEF4-201ENST00000397081 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.08■□□□□ 0.16
RAPGEF4-201ENST00000397081 GSTTP1A0A1W2PQM5 241 aa16.08■□□□□ 0.16
RAPGEF4-201ENST00000397081 RPS6KA5O75582 802 aa16.08■□□□□ 0.16
RAPGEF4-201ENST00000397081 CLNS1AP54105 237 aaKnown RBP16.08■□□□□ 0.16
RAPGEF4-201ENST00000397081 PTK2Q05397 1052 aa16.08■□□□□ 0.16
RAPGEF4-201ENST00000397081 NBPF9Q3BBW0 867 aa16.08■□□□□ 0.16
RAPGEF4-201ENST00000397081 ZNF804AQ7Z570 1209 aa16.08■□□□□ 0.16
RAPGEF4-201ENST00000397081 MYCBPAPQ8TBZ2 947 aa16.08■□□□□ 0.16
RAPGEF4-201ENST00000397081 N4BP2L2Q92802 583 aaPredicted RBP16.08■□□□□ 0.16
RAPGEF4-201ENST00000397081 TAF1DQ9H5J8 278 aaPredicted RBP16.08■□□□□ 0.16
RAPGEF4-201ENST00000397081 ZBTB21Q9ULJ3 1066 aa16.08■□□□□ 0.16
RAPGEF4-201ENST00000397081 UBXN2AP68543 259 aa16.07■□□□□ 0.16
RAPGEF4-201ENST00000397081 NCAPGQ9BPX3 1015 aa16.07■□□□□ 0.16
RAPGEF4-201ENST00000397081 CEP72Q9P209 647 aa16.07■□□□□ 0.16
RAPGEF4-201ENST00000397081 ATRNO75882 1429 aa16.07■□□□□ 0.16
RAPGEF4-201ENST00000397081 CCDC172P0C7W6 258 aa16.07■□□□□ 0.16
RAPGEF4-201ENST00000397081 ZKSCAN8Q15776 578 aaPredicted RBP16.07■□□□□ 0.16
RAPGEF4-201ENST00000397081 PTGISQ16647 500 aa16.07■□□□□ 0.16
RAPGEF4-201ENST00000397081 TRAPPC3LQ5T215 181 aa16.07■□□□□ 0.16
RAPGEF4-201ENST00000397081 SH3GLB2Q9NR46 395 aa16.07■□□□□ 0.16
RAPGEF4-201ENST00000397081 CTTNBP2NLQ9P2B4 639 aa16.07■□□□□ 0.16
RAPGEF4-201ENST00000397081 NOC2LQ9Y3T9 749 aaKnown RBP16.07■□□□□ 0.16
RAPGEF4-201ENST00000397081 GTF2IP78347 998 aa16.07■□□□□ 0.16
RAPGEF4-201ENST00000397081 CENPPQ6IPU0 288 aa16.07■□□□□ 0.16
RAPGEF4-201ENST00000397081 GALNT17Q6IS24 598 aa16.07■□□□□ 0.16
RAPGEF4-201ENST00000397081 THOC1Q96FV9 657 aaKnown RBP16.07■□□□□ 0.16
RAPGEF4-201ENST00000397081 PARP4Q9UKK3 1724 aaKnown RBP16.06■□□□□ 0.16
RAPGEF4-201ENST00000397081 HSD17B3P37058 310 aa16.06■□□□□ 0.16
RAPGEF4-201ENST00000397081 WHAMMQ8TF30 809 aa16.06■□□□□ 0.16
RAPGEF4-201ENST00000397081 MAGEF1Q9HAY2 307 aa16.06■□□□□ 0.16
RAPGEF4-201ENST00000397081 AMFRQ9UKV5 643 aa16.06■□□□□ 0.16
RAPGEF4-201ENST00000397081 ODF2LQ9ULJ1 636 aa16.06■□□□□ 0.16
RAPGEF4-201ENST00000397081 GMNCA6NCL1 334 aa16.06■□□□□ 0.16
RAPGEF4-201ENST00000397081 EPB41P11171 864 aaKnown RBP16.06■□□□□ 0.16
RAPGEF4-201ENST00000397081 SLC18A3Q16572 532 aa16.06■□□□□ 0.16
RAPGEF4-201ENST00000397081 TBC1D1Q86TI0 1168 aaPredicted RBP16.06■□□□□ 0.16
RAPGEF4-201ENST00000397081 ANKS4BQ8N8V4 417 aa16.06■□□□□ 0.16
RAPGEF4-201ENST00000397081 LMBR1Q8WVP7 490 aa16.06■□□□□ 0.16
RAPGEF4-201ENST00000397081 FGFBP2Q9BYJ0 223 aa16.06■□□□□ 0.16
RAPGEF4-201ENST00000397081 KLC4Q9NSK0 619 aa16.06■□□□□ 0.16
RAPGEF4-201ENST00000397081 GCNT4Q9P109 453 aa16.06■□□□□ 0.16
RAPGEF4-201ENST00000397081 SAMD15Q9P1V8 674 aa16.06■□□□□ 0.16
RAPGEF4-201ENST00000397081 SIK3Q9Y2K2 1263 aa16.06■□□□□ 0.16
RAPGEF4-201ENST00000397081 TMOD4Q9NZQ9 345 aa16.06■□□□□ 0.16
RAPGEF4-201ENST00000397081 STK17AQ9UEE5 414 aa16.06■□□□□ 0.16
RAPGEF4-201ENST00000397081 ARFGEF2Q9Y6D5 1785 aa16.05■□□□□ 0.16
RAPGEF4-201ENST00000397081 HMGB1P1B2RPK0 211 aaPredicted RBP16.05■□□□□ 0.16
RAPGEF4-201ENST00000397081 DDX39AO00148 427 aaKnown RBP16.05■□□□□ 0.16
RAPGEF4-201ENST00000397081 FAM13AO94988 1023 aa16.05■□□□□ 0.16
RAPGEF4-201ENST00000397081 RASA1P20936 1047 aa16.05■□□□□ 0.16
RAPGEF4-201ENST00000397081 TNFAIP3P21580 790 aa16.05■□□□□ 0.16
RAPGEF4-201ENST00000397081 LRRC14Q15048 493 aa16.05■□□□□ 0.16
RAPGEF4-201ENST00000397081 GLYCTKQ8IVS8 523 aa16.05■□□□□ 0.16
RAPGEF4-201ENST00000397081 MYCT1Q8N699 235 aa16.05■□□□□ 0.16
RAPGEF4-201ENST00000397081 CUL5Q93034 780 aa16.05■□□□□ 0.16
RAPGEF4-201ENST00000397081 CYFIP2Q96F07 1278 aa16.05■□□□□ 0.16
RAPGEF4-201ENST00000397081 TTYH3Q9C0H2 523 aa16.05■□□□□ 0.16
RAPGEF4-201ENST00000397081 RIC8AQ9NPQ8 531 aa16.05■□□□□ 0.16
RAPGEF4-201ENST00000397081 RGS16O15492 202 aaPredicted RBP16.05■□□□□ 0.16
RAPGEF4-201ENST00000397081 NFIXQ14938 502 aa16.05■□□□□ 0.16
RAPGEF4-201ENST00000397081 PHLDB2Q86SQ0 1253 aa16.05■□□□□ 0.16
RAPGEF4-201ENST00000397081 TPH2Q8IWU9 490 aa16.05■□□□□ 0.16
RAPGEF4-201ENST00000397081 ELAC2Q9BQ52 826 aaKnown RBP16.05■□□□□ 0.16
RAPGEF4-201ENST00000397081 BLOC1S4Q9NUP1 217 aa16.05■□□□□ 0.16
RAPGEF4-201ENST00000397081 FECHP22830 423 aa16.05■□□□□ 0.16
RAPGEF4-201ENST00000397081 CCDC13Q8IYE1 715 aa16.05■□□□□ 0.16
RAPGEF4-201ENST00000397081 PIGOQ8TEQ8 1089 aa16.05■□□□□ 0.16
RAPGEF4-201ENST00000397081 LZTS2Q9BRK4 669 aa16.05■□□□□ 0.16
RAPGEF4-201ENST00000397081 PNMA2Q9UL42 364 aa16.05■□□□□ 0.16
RAPGEF4-201ENST00000397081 DNM3Q9UQ16 869 aa16.05■□□□□ 0.16
RAPGEF4-201ENST00000397081 MYH2Q9UKX2 1941 aa16.05■□□□□ 0.16
RAPGEF4-201ENST00000397081 STAT1P42224 750 aa16.05■□□□□ 0.16
RAPGEF4-201ENST00000397081 ERVK-9P63128 1117 aa16.05■□□□□ 0.16
RAPGEF4-201ENST00000397081 ANKS1AQ92625 1134 aa16.05■□□□□ 0.16
RAPGEF4-201ENST00000397081 GLG1Q92896 1179 aa16.05■□□□□ 0.16
RAPGEF4-201ENST00000397081 KIF4AO95239 1232 aa16.04■□□□□ 0.16
RAPGEF4-201ENST00000397081 CACNB3P54284 484 aa16.04■□□□□ 0.16
RAPGEF4-201ENST00000397081 SNCBQ16143 134 aa16.04■□□□□ 0.16
RAPGEF4-201ENST00000397081 DENND2CQ68D51 928 aa16.04■□□□□ 0.16
RAPGEF4-201ENST00000397081 CCDC105Q8IYK2 499 aa16.04■□□□□ 0.16
RAPGEF4-201ENST00000397081 RNF10Q8N5U6 811 aaKnown RBP16.04■□□□□ 0.16
RAPGEF4-201ENST00000397081 USP38Q8NB14 1042 aa16.04■□□□□ 0.16
RAPGEF4-201ENST00000397081 MMTAG2Q9BU76 263 aaKnown RBP16.04■□□□□ 0.16
RAPGEF4-201ENST00000397081 ZMYND12Q9H0C1 365 aa16.04■□□□□ 0.16
RAPGEF4-201ENST00000397081 NUCKS1Q9H1E3 243 aaKnown RBP16.04■□□□□ 0.16
RAPGEF4-201ENST00000397081 CXorf56Q9H5V9 222 aa16.04■□□□□ 0.16
RAPGEF4-201ENST00000397081 PCDHA1Q9Y5I3 950 aa16.04■□□□□ 0.16
RAPGEF4-201ENST00000397081 A6NNZ2 444 aa16.04■□□□□ 0.16
RAPGEF4-201ENST00000397081 USP17L10C9JJH3 530 aa16.04■□□□□ 0.16
RAPGEF4-201ENST00000397081 PDHBP11177 359 aa16.04■□□□□ 0.16
RAPGEF4-201ENST00000397081 TAL1P17542 331 aaPredicted RBP16.04■□□□□ 0.16
RAPGEF4-201ENST00000397081 TUBB8Q3ZCM7 444 aa16.04■□□□□ 0.16
RAPGEF4-201ENST00000397081 ZNF746Q6NUN9 644 aaPredicted RBP16.04■□□□□ 0.16
RAPGEF4-201ENST00000397081 SFR1Q86XK3 245 aa16.04■□□□□ 0.16
RAPGEF4-201ENST00000397081 PNMA5Q96PV4 448 aa16.04■□□□□ 0.16
RAPGEF4-201ENST00000397081 SPATA31A6Q5VVP1 1343 aa16.04■□□□□ 0.16
RAPGEF4-201ENST00000397081 KCNMA1Q12791 1236 aa16.04■□□□□ 0.16
RAPGEF4-201ENST00000397081 CDC37Q16543 378 aaPredicted RBP16.04■□□□□ 0.16
RAPGEF4-201ENST00000397081 FMO2Q99518 471 aa16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms